A new color index for vegetation segmentation and classification

Color vegetation indices enable various precision agriculture applications by transforming a 3D-color image into its 1D-grayscale counterpart, such that the color of vegetation pixels can be accentuated, while those of nonvegetation pixels are attenuated. The quality of the transformation is essential to the outcomes of computational analyses to follow. The objective of this article is to propose a new vegetation index, the Elliptical Color Index (ECI), which leverages the quadratic discriminant analysis of 3D-color images along a normalized red (r)—green (g) plane. The proposed index is defined as an ellipse function of r and g variables with a shape parameter. For comparison, the ECI’s performance was evaluated along with six other indices, by using 240 color images as a test sample captured from four vegetation species under different illumination and background conditions, together with the corresponding ground-truth patterns. For comparative analysis, the receiver operating characteristic (ROC) and the precision–recall (PR) curves helped quantify the overall performance of vegetation segmentation across all of the vegetation indices evaluated. For a practical appraisal of vegetation segmentation outcomes, this paper applied Gaussian filtering, and then the thresholding method of Otsu, to the grayscale images transformed by each of the indices. Overall, the test results confirmed that ECI outperforms the other indices, in terms of the area under the curves of ROC and PR, as well as other performance metrics, including total error, precision, and F-score.

     

Partitioning of Newly Absorbed and Previously Stored Nitrogen and Sulfur Under Sulfate Deficient Nutrition

Sulfur (S) deficiency effects on nitrogen (N) and S fluxes during vegetative growth of Brassica napus was investigated by tracing ¹⁵N and ³⁴S for 9 d of S-sufficient [1.5 mM sulfate (SO₄^2-)] and S-deficient (0.05 mM SO₄^2-) condition. A significant decrease in leaf osmotic potential and chlorophyll content was apparent after 9 d of S-deficiency. Sulfur uptake during 9 d was remarkably decreased by 94.3% by S-deficiency, whereas no significant change occurred for N uptake. The N and S deriving from uptake were mainly allocated to the leaves in control plants, but the S flow into leaves was largely restricted under S-deficient condition. The remobilization of stored N and S were mainly issued only from leaves in control plants, while from leaves and petiole in S-deficient ones. The remobilization of N and S mainly issued from leaves flows into the roots both in control and S-deficient plants.     

Identifying Type of Refined Petroleum Products in Environmental Media: Thin-Layer Chromatography (TLC) as a Quick Methodology

The ultimate goal of our study is to establish thin-layer chromatography (TLC) as a quick and simple method for identifying the type of refined petroleum products present in the environmental media. As a preliminary step, TLC chromatograms of different petroleum products, including gasoline, kerosene, and diesel, were characterized and compared. Methanol was determined as the optimum carrier solution in TLC analysis. The spherical-shaped TLC chromatogram of gasoline showed the longest migration distance, and thus the highest retardation factor (R _f) of 0.91. This was followed by that of kerosene (0.63) with an elliptical-shaped, and diesel (0.24) with an elongated trapezoid-shaped chromatogram. R _f of kerosene and diesel increased with the dilution factor, while gasoline showed a constant value. Additionally, it was observed that the TLC chromatograms of oils produced the same peak pattern with the corresponding petroleum products in gas chromatography (GC). A mixed sample of kerosene and diesel presented a triangular shaped chromatogram, underlining the need to consider the shape of chromatogram in addition to the R _f value, as an indicator of the petroleum type. The findings indicate that TLC has a huge potential to be used as a quick and reliable method for identifying the type of refined petroleum products in the environmental media.     

Fungal endophyte Penicillium janthinellum LK5 can reduce cadmium toxicity in Solanum lycopersicum (Sitiens and Rhe)

We investigated the role of gibberellins-producing endophyte Penicillium janthinellum LK5 associated with Solanum lycopersicum (host), abscisic acid (ABA)-deficient tomato mutant Sitiens and its wild-type Rheinlands Ruhm (Rhe) plants under cadmium (Cd) stress. A 100-μM Cd application to host, Sitiens and Rhe reduced the shoot growth, chlorophyll content and stomatal conductance. However, these parameters were significantly (P?<?0.0011) higher (1.0- to 2.6-folds) in host, Sitiens and Rhe under endophytic association than in non-endophyte infected plants (control) under Cd stress. Furthermore, endophytic association minimized the Cd-induced membrane injury and oxidative stress to host, Sitiens and Rhe plants by reducing electrolytes and lipid peroxidation while increasing the content of reduced glutathione and catalase activities as compared to non-endophyte-infected plants. Stress-responsive ABA content significantly increased (～2-folds) in Sitiens and Rhe under endophyte association, while in host plants it was decreased under Cd stress. Salicylic acid content was ～?1.7-fold higher in host, Sitiens and Rhe plants under Cd stress and endophyte association than in the control. Besides gibberellins production, the endophyte has the potential to solubilize phosphates (12.73?±?0.24 mg/l) since higher P was observed in the roots of Sitiens, Rhe and host plants. Similarly, nutrients like sulfur and calcium were more efficiently assimilated in roots of endophyte-associated plants than control under Cd stress. Conversely, Cd accumulation was significantly decreased (P?<?0.001) in the roots of endophyte-inoculated host, Sitiens and Rhe than control. In conclusion, endophyte symbiosis can counteract heavy metal stress which can exert negative effects on plant growth.     

Mechanical properties of semi-interpenetrating polymer network hydrogels based on poly(2-hydroxyethyl methacrylate) copolymer and chitosan

Semi-interpenetrating polymeric network (semi-IPN) hydrogels based on poly(2-hydroxyethyl methacrylate) (PHEMA) and poly(2-hydroxyethyl methacrylate-co-sodium methacrylate) [P(HEMA-co-SMA)], and chitosan with different molecular weights were prepared by crosslinking with ethylene glycol dimethacrylate (EGDMA) and poly(ethylene glycol) diacrylate (PEGDA) and their gelation time, water content, mechanical properties, and morphology were investigated. In consideration of the influence of the molecular weight of chitosan, there is no big difference in the water content, while tensile properties and compressive modulus increased as the molecular weight of chitosan increased. The water content increased and tensile properties and compressive modulus decreased with increasing SMA concentration. Considering the effect of the crosslinking agent, PEGDA had higher water content and lower tensile and compressive moduli than EGDMA. It is suggested that PHEMA/chitosan and P(HEMA-co-SMA)/chitosan semi-IPN hydrogels with different structures and physical properties can be prepared depending on the molecular weight of chitosan, the copolymerization with SMA, and the crosslinking agent type.     

Dual functions of ferrous sulfate as a pore-size controller and a carbon-yield enhancer in fabricating cellulose based porous carbons

This study reports the dual-functions of ferrous sulfate, i.e. as a carbon-yield-enhancer and as a pore-size-controller, in the preparation of porous carbons from rice straws. Through the impregnation of rice straws with 0.5 M aq. FeSO₄, the carbon yield of the resultant porous carbons increased by ca. 10% and the size of the newly created pores was precisely controlled at the diameter of 0.53 nm during carbonization process. The observed results were discussed from the view points of the thermal degradation mechanism of cellulose and the pillar effects by the in-situ formed crystallites of Fe₃O₄. The inherent magnetic property due to the presence of magnetite, Fe₃O₄, was an additional merit of the obtained porous carbons.     

Expression of esterase gene in yeast for organophosphates biodegradation

Organophosphates are esters of phosphoric acid and can be hydrolyzed and detoxified by carboxylesterase and phosphotriesterase. In this work esterase enzyme (Est5S) was expressed in yeast to demonstrate the organophosphorus hydrolytic activity from a metagenomic library of cow rumen bacteria. The esterase gene (est5S) is 1098 bp in length, encoding a protein of 366 amino acid residues with a molecular weight of 40 kDa. Est5S enzyme was successfully produced by Pichia pastoris at a high expression level of approximately 4.0 g L⁻¹. With p-nitrophenol butyrate as the substrate, the optimal temperature and pH for enzyme activity were determined to be 40 °C and pH 7.0, respectively. The esterase enzyme was tested for degradation of chlorpyrifos (CP). TLC results obtained inferred that CP could be degraded by esterase enzyme (Est5S) and HPLC results revealed that CP could be efficiently degraded up to 100 ppm. Cadusafos (CS), coumaphos (CM), diazinon (DZ) dyfonate (DF), ethoprophos (EP), fenamiphos (FM), methylparathion (MPT), and parathion (PT) were also degraded up to 68, 60, 80, 40, 45, 60, 95, and 100%, respectively, when used as a substrate with Est5S protein. The results highlight the potential use of this enzyme in the cleanup of contaminated insecticides.     

Eco-friendly dyeing of poly(trimethylene terephthalate) with temporarily solubilized azo disperse dyes based on pyridone derivatives

Dispersant-free PTT dyeing of temporarily solubilized azo disperse dyes based on pyridone moiety which contain β-sulfatoethylsulfonyl group was investigated. The dyes were successfully applied to PTT without the use of dispersants. The color yields of the dyes on PTT fabric were dependent on dyeing pH as well as dyeing temperature. The optimum results were obtained at pH 5–6 and 110 °C. The dyes showed alkali-clearing property and exhibited good to excellent fastness on the PTT fabric. The COD levels of the dyeing effluent from the temporarily solubilized disperse dyes were much smaller than those from commercial disperse dye.     

Interaction between water-soluble carbohydrate reserves and defoliation severity on the regrowth of perennial ryegrass (Lolium perenne L.)-dominant swards

A field-study was undertaken in Hamilton, New Zealand to determine if there was an interaction between water-soluble carbohydrate (WSC) reserve content and defoliation severity on the regrowth of perennial ryegrass-dominant swards during winter. Perennial ryegrass plants with either low or high WSC content were obtained by varying the defoliation frequency. At the third defoliation at the one-leaf stage and at the first defoliation at the three-leaf stage (harvest H₁), swards were mown with a rotary lawnmower to residual stubble heights of 20, 40 or 60 mm. All swards were then allowed to regrow to the three-leaf stage before again defoliating to their treatment residual stubble heights (H₂). Frequently defoliated plants contained proportionately between 0·37 and 0·48 less WSC in the stubble after defoliation, depending on the severity of defoliation. There was no interaction between WSC content and defoliation severity for herbage regrowth between harvests H₁ and H₂. Herbage regrowth was lower from swards containing low WSC plants compared with high WSC plants (2279 vs. 2007 kg DM ha⁻¹). Furthermore, swards defoliated to 20 or 40 mm had greater herbage regrowth compared with those defoliated to 60 mm (2266, 2249 and 1914 kg DM ha⁻¹ for swards defoliated to residual stubble heights of 20, 40 and 60 mm, respectively). Regrowth of perennial ryegrass was positively correlated with post-defoliation stubble WSC content within defoliation severity treatment, implying that WSC contributed to the defoliation frequency-derived difference in herbage yield. However, the effect of defoliation severity on herbage regrowth was not associated with post-defoliation stubble WSC content.     

Inhibitory Effect of N,N-Didesmethylgrossularine-1 on Inflammatory Cytokine Production in Lipopolysaccharide-Stimulated RAW 264.7 Cells

N,N-Didesmethylgrossularine-1 (DDMG-1), a compound with a rare α-carboline structure, was isolated from an Indonesian ascidian Polycarpa aurata as responsible for the observed inhibitory activity against TNF-α production in lipopolysaccharide-stimulated murine macrophage-like RAW264.7 cells. DDMG-1 inhibited the mRNA level of mTNF-α, IκB-α degradation, and binding of NF-κB to the target DNA site in LPS-stimulated RAW 264.7 cells. Moreover, DDMG-1 had an inhibitory effect on the production of IL-8, which is produced in CD14⁺-THP-1 cells stimulated by LPS. DDMG-1 is thus a promising drug candidate lead compound for the treatment of chronic inflammatory diseases, such as rheumatoid arthritis.