Analysis of world strains of Anaplasma marginale using major surface protein 1a repeat sequences

Anaplasma marginale is a tick-borne pathogen of cattle that causes the disease bovine anaplasmosis worldwide. Major surface proteins (MSPs) are involved in host-pathogen and tick-pathogen interactions and have been used as markers for the genetic characterization of A. marginale strains and phylogenetic studies. MSP1a is involved in the adhesion and transmission of A. marginale by ticks and varies among geographic strains in the number and sequence of amino-terminal tandem repeats. The aim of this study was to characterize the genetic diversity of A. marginale strains collected from countries in North and South America, Europe, Asia, Africa and Australia, inclusive of all continents. In this study, we characterized 131 strains of A. marginale using 79 MSP1a repeat sequences. These results corroborated the genetic heterogeneity of A. marginale strains in endemic regions worldwide. The phylogenetic analyses of MSP1a repeat sequences did not result in clusters according to the geographic origin of A. marginale strains but provided phylogeographic information. Seventy-eight percent of the MSP1a repeat sequences were present in strains from a single geographic region. Strong (> or =80%) support was found for clusters containing sequences from Italian, Spanish, Chinese, Argentinean and South American strains. The phylogenetic analyses of MSP1a repeat sequences suggested tick-pathogen co-evolution and provided evidence of multiple introductions of A. marginale strains from various geographic locations worldwide. These results contribute to the understanding of the genetic diversity and evolution of A. marginale and tick-pathogen interactions.     

Molecular identification of Echinococcus granulosus genotypes (G1 and G7) isolated from pigs in Mexico

With the aim of genotyping Echinococcus granulosus cysts found in Mexican livestock, we collected hydatid cysts from the livers and lungs of pigs in slaughterhouses in the state of Morelos, Central Region of Mexico. DNA was extracted from the parasites and examined by polymerase chain reaction (PCR) of rDNA internal transcribed spacer 1 (ITS1-PCR), Eg9-PCR, Eg16-PCR, and PCR-restriction fragment length polymorphism (PCR-RFLP). In addition, fragments of the genes coding for mitochondrial cytochrome c oxidase subunit 1 (CO1) and NADH dehydrogenase 1 (ND1) were sequenced. Two different genotypes of E. granulosus were unequivocally identified, the common sheep genotype, G1, and the common pig genotype, G7. The G1 genotype of E. granulosus has not been previously demonstrated in Mexico. Because of its recognized infectivity in humans, G1 genotype is a direct threat to human health and its presence in Mexico is consequently of immediate public health importance and epidemiological relevance.     

Earthworm communities in native savannas and man-made pastures of the Eastern Plains of Colombia

 The structure and seasonal changes of earthworm communities were evaluated in a natural savanna and in a improved grass-legume pasture in a Colombian oxisol over a period of 18 months. One plot of 90×90 m was isolated in each of the systems and each month five samples of 1 m²×0.5 m and ten of 20×20×20 cm were randomly selected from a stratified block design. Species richness was similar in the two evaluated plots (seven species), whereas diversity measured by the index, H (Shannon and Weaver 1949) was clearly different, i.e. H=2.89 in natural savanna and H=1.29 in pasture. This is explained by differences in earthworm community structure. The average annual density in the savanna was 49.8, ranging from 10.8 to 135.8 individuals (ind) m^–2, and biomass was 3.3 g m^–2 (hand-sorting method), ranging from 0.9 to 11.5 g m^–2. In the man-made pasture, density was 80.1 ind m^–2 on average, ranging from 24 to 215.8 ind m^–2 and biomass was more than tenfold higher, ranging from 29.2 to 110.4 g m^–2. This was especially due to the presence of a large glossoscolecid anecic species, Martiodrilus carimaguensis Jiménez and Moreno, which has been greatly favoured by conversion of savanna to pasture. Endogeic species were dominant in the natural savanna whereas the anecic species accounted for 88% of total earthworm biomass in the pasture. Total earthworm density and biomass were significantly different in the two systems studied (t-test). The results indicate a clearly positive response of earthworm communities to improved pastures, a type of land use that is being increasingly adopted in moist neotropical savannas. Received: 20 October 1997     

What is so disturbing about Jan Smiley's A Thousand Acres?

Jane Smiley's award winning and disturbing novel, A Thousand Acres, invites a critical appraisal of a popular assumption for proponents of sustainable agriculture: that family farming and sustainable agriculture are (at least indirectly) mutually reinforcing. This process begins with a plot that presents an Iowa multigenerational farm family headed by an acutely dominant father. Consequences of this dominance include subjugation of everyone involved with the farming operation, varieties of abuse of the daughters, and primitive non-environmental farming. Also in the novel three structural components of the family farm/rural setting aggravate the nightmarish situation: multigenerational participation in one farming operation, children remaining on the farm, uninterrupted, into adulthood, and the power of community appearances. It is argued that these components contribute not only to the family problems, but also to making the poor farming that emerges in this family not very coincidental. This analysis, if correct, raises many issues about farm structure and farming practices. They include how the younger generation(s) of family farm structures cope with their situations, whether aspects of family farms skew who decides to remain to farm, family farm ownership and transfer structure, how well farmers understand their own farms, and the case for voluntarism regarding environmental issues in farming. One theme throughout the essay is that the novel enables better recognition and appreciation of the subtle relationship between family problems and farming practices.     

Use of butanol-water mixtures for making wheat straw pulp

Summary A central composite design was used to investigate the influence of the cooking conditions (time, temperature and butanol concentration) for wheat straw with butanol-water mixtures on the properties of the pulp obtained (yield and holocellulose, α-cellulose, lignin and ethanol-benzene extractives contents) and the pH of the resulting waste water. A second-order polynomial model consisting of three independent process variables was found to accurately describe the organosolv pulping of wheat straw. The equations derived predict the yield, the holocellulose, α-cellulose, lignin and ethanol-benzene extractives contents of the pulp, and the pH of the waste water with multiple-R, R², adjusted-R² and Snedecor' F values of 0.99, 0.99, 0.99 and 310.33; 0.98, 0.97, 0.95 and 56.63; 0.91, 0.84, 0.74 and 9.14; 0.99, 0.98, 0.96 and 70.52; 0.97, 0.94, 0.92 and 40.42; and 0.98, 0.95, 0.93 and 49.33, respectively. The process variables must be set at low values in order to ensure a high yield and pH. On the other hand, if a high holocellulose content and low lignin and ethanol-benzene extractives contents are to be obtained, then the process variables must be set at high values. Finally, obtaining pulp with a high α-cellulose content entails using a long cooking time and a high temperature, as well as a low butanol concentration. Received 1 July 1996     

Interspecific interactions of ungulates in European forests: an overview

Mammalian herbivores vary in the degree to which they browse, graze and cause physical disturbance, and so vary in the effects they have on the structure and composition of forest ecosystems. To create predictive models of the interactions of forest ecosystems with herbivore communities, an appreciation of the interactions between the species of herbivore themselves is necessary. This paper reviews interspecific interactions of ungulates, methods used in studying them, and seeks to identify areas to which future research should be directed in the context of European forest systems. Methods that have been used to provide information on interactions include: comparative resource studies, niche theory, physiological and anatomical analyses, modeling and foraging theory, and population studies. The most commonly reported types of interactions appear to be competition and facilitation. Behavioural and social interactions between species are potentially important, but evidence for these is scarce and often anecdotal. It is suggested that there may be considerable potential for ungulates to interact in European forests which are often significantly altered from their natural state. Future research should aim at refining the theoretical understanding of interspecific interactions, particularly between ungulates with different feeding ecologies. The roe deer (Capreolus capreolus) has a major impact on forest ecosystems and is increasing its range throughout Europe. However, there is evidence that it may be displaced or out-competed by a number of ungulate species, and it is suggested as being research priority to quantify these effects.     

Seasonal shoot and needle growth of loblolly pine responds to thinning, fertilization, and crown position

The impacts of thinning, fertilization and crown position on seasonal growth of current-year shoots and foliage were studied in a 13-year-old loblolly pine (Pinus taeda L.) plantation in the sixth post-treatment year (1994). Length of new flushes, and their needle length, leaf area, and oven-dry weight were measured in the upper and lower crown from March through November. Total shoot length was the cumulative length of all flushes on a given shoot and total leaf area per shoot was the sum of leaf areas of the flushes.

By the end of June, first-flush foliage reached 70% of the November needle length (14.3 cm) and 65% of the final leaf area (15.0 cm²). Cumulative shoot length of first- and second-flush shoots achieved 95% of the annual length (30.3 cm), whereas total leaf area per shoot was 55% of the final value (75.3 dm²). Fertilization consistently stimulated fascicle needle length, dry weight, and leaf area in the upper crown. Mean leaf area of upper-crown shoots was increased by 64% six years after fertilization. A significant thinning effect was found to decrease mean leaf area per shoot in the crown. For most of the growing season, the thinned-fertilized trees produced substantially more leaf area per shoot throughout the crown than the thinned-nonfertilized trees. These thinned-fertilized trees also had greater needle length and dry weight, longer first flush shoots, and more leaf area per flush than trees in the thinned-nonfertilized plots. Needle length and leaf area of first flush shoots between April and July were linearly related to previous-month canopy air temperature (T_a). Total shoot length strongly depended on vertical light gradient (PPFD) within the canopy, whereas shoot leaf area was a function of both PPFD and T_a. Thus, trees produced larger and heavier fascicles, more and longer flush shoots, and more leaf area per shoot in the upper crown than the lower crown. We conclude that thinning, fertilization, and crown position regulate annual leaf area production of current-year shoots largely by affecting the expansion of first flush shoots and their foliage during the first half of the growing season.     

Persistence of maternal antibodies against Mycoplasma agassizii in desert tortoise hatchlings.

OBJECTIVE: To investigate Mycoplasma agassizii-specific maternal antibodies in desert tortoise (Gopherus agassizii) hatchlings. SAMPLE POPULATION: Plasma from 43 captive-reared desert tortoise hatchlings. PROCEDURE: ELISA for M agassizii-specific antibodies was performed. Four hatchlings from 4 clutches of 3 M agassizii-seropositive females with chronic upper respiratory tract disease (URTD) were tested on the day of hatching (set 1), and 20 hatchlings from 4 clutches of 4 M agassizii-seropositive females with URTD and 19 hatchlings from 4 M agassizii-seronegative healthy females were tested at 4, 8, 12, and 29 months old (set 2). Immunoblot analysis was performed to determine immunoglobulin classes in yolk and plasma of hatchlings. To determine infection status of hatchlings, yolk, egg shell membranes (set 1), and nasal lavage fluid (sets 1 and 2) were examined for M agassizii by use of polymerase chain reaction. RESULTS: Yolk and hatchling plasma had significantly lower amounts of specific antibodies than did plasma from adult females. The IgG and IgM antibodies were transferred, but M agassizii-specific antibodies were of the IgG class. Hatchlings were not infected with mycoplasmas. Offspring of sick females had significantly higher specific antibody titers than did offspring of healthy females. Titers were still significantly different in 1-year-old hatchlings. CONCLUSIONS: Desert tortoise females transfer specific IgG and IgM antibodies to their offspring that are still detectable after 1 year. CLINICAL RELEVANCE: Infection with M agassizii may be misdiagnosed in hatchlings with persistent maternal antibodies. Passively acquired antibodies may have a role in pathogenesis of mycoplasma-induced respiratory tract disease and other diseases.     

Impact of Caligus treatments on unit costs of heterogeneous salmon farms in Chile

We measure the impact that sanitary treatments that control ectoparasite Caligus rogercresseyi abundance have on unit production costs of Salmo salar farms in Chile. We follow complete production cycles for a sample of farms between 2009 and 2015. We estimate a simultaneous salmon biomass growth and Caligus abundance model. The statistical analysis determines the effect of antiparasitic treatments, location of farms, environmental conditions and Caligus abundance on the salmon growth profile. Using outside cost information, we simulate how unit production costs vary by treatment and farm characteristics. Our results suggest that unit production costs increase on average by $1.4?US/kg with Caligus and treatments. Treatment costs are compensated by higher harvesting levels, and unit production costs are invariant to the situation without treatment. All estimated effects differ depending on farm’s environmental and spatial conditions, suggesting that the design of cost-effective intervention calls for discriminatory regulation under heterogeneous conditions.