Local orbital forcing of antarctic climate change during the last interglacial

During the last interglacial, Antarctic climate changed before that of the Northern Hemisphere. Large local changes in precession forcing could have produced this pattern if there were a rectified response in sea ice cover. Results from a coupled sea ice-ocean general circulation model supported this hypothesis when it was tested for three intervals around the last interglacial. Such a mechanism may play an important role in contributing to phase offsets between Northern and Southern Hemisphere climate change for other time intervals.     

Reconstructing past ocean pH-depth profiles

Measurement of boron isotope compositions in species of planktonic foraminifera that calcified their tests at different depths in the water column are used to reconstruct the pH profile of the upper water column of the tropical ocean. Results for five time windows from the middle Miocene to the late Pleistocene indicate pH-depth profiles similar to that of the modern ocean in this area, which suggests that this method may greatly aid in our understanding of the global carbon cycle.     

The benthic impacts of a large cod farm — Are there indicators for environmental sustainability?

A cod farm in Vidlin Voe, Shetland was at the time of the study the largest cod farm in Europe, and was started in 2003. Run according to organic principles, the farm consisted of 17  32 m diameter cages in the 3 km long sea loch (locally known as voe), which though extremely exposed at the mouth, is sheltered near the cages.Benthic macrofauna and physical/chemical sediment parameters were measured in the summer months of 2004, 2005 and 2006 as biomass increased in the growing cycle. A range of biotic indices showed the benthic environment was enriched at peak biomass of the farm, but by contrast, surficial CHN levels and organic matter were low and uniform. The commonly used sediment indicators redox, total organic carbon and total organic nitrogen did not correlate well with biotic indicators at this site. Predictions from a near-field particle tracking and resuspension model (CODMOD) and a simple nutrient enhancement box model of the voe system (Equilibrium Concentration Enhancement (ECE) model), were used to assess the assimilative capacity of the system.     

An inter-laboratory comparison of multi-enzyme and multiple substrate-induced respiration assays to assess method consistency in soil monitoring

The use of indicators in soil monitoring schemes to detect changes in soil quality is receiving increased attention, particularly the application of soil biological methods. However, to date, the ability to compare information from different laboratories applying soil microbiological techniques in broad-scale monitoring has rarely been taken into account. This study aimed to assess the consistency and repeatability of two techniques that are being evaluated for use as microbiological indicators of soil quality: multi-enzyme activity assay and multiple substrate-induced respiration (MSIR). Data were tested for intrinsic (within-assay plate) variation, inter-laboratory repeatability (geometric mean regression and correlation coefficient) and land-use discrimination (principal components analysis). Intrinsic variation was large for both assays suggesting that high replicate numbers are required. Inter-laboratory repeatability showed diverging patterns for the enzyme assay and MSIR. Discrimination of soils was significant for both techniques with relatively consistent patterns; however, combined laboratory discrimination analyses for each technique showed inconsistent correspondence between the laboratories. These issues could be addressed through the adoption of reliable analytical standards for biological methods along with adequate replication. However, until the former is addressed, dispersed analyses are not currently advisable for monitoring schemes.     

Estimating nocturnal ecosystem respiration from the vertical turbulent flux and change in storage of CO2

Micrometeorological measurements of nighttime ecosystem respiration can be systematically biased when stable atmospheric conditions lead to drainage flows associated with decoupling of air flow above and within plant canopies. The associated horizontal and vertical advective fluxes cannot be measured using instrumentation on the single towers typically used at micrometeorological sites. A common approach to minimize bias is to use a threshold in friction velocity, u_*, to exclude periods when advection is assumed to be important, but this is problematic in situations when in-canopy flows are decoupled from the flow above. Using data from 25 flux stations in a wide variety of forest ecosystems globally, we examine the generality of a novel approach to estimating nocturnal respiration developed by van Gorsel et al. (van Gorsel, E., Leuning, R., Cleugh, H.A., Keith, H., Suni, T., 2007. Nocturnal carbon efflux: reconciliation of eddy covariance and chamber measurements using an alternative to the u_*-threshold filtering technique. Tellus 59B, 397–403, Tellus, 59B, 307-403). The approach is based on the assumption that advection is small relative to the vertical turbulent flux (F_C) and change in storage (F_S) of CO₂ in the few hours after sundown. The sum of F_C and F_S reach a maximum during this period which is used to derive a temperature response function for ecosystem respiration. Measured hourly soil temperatures are then used with this function to estimate respiration R_Rmax. The new approach yielded excellent agreement with (1) independent measurements using respiration chambers, (2) with estimates using ecosystem light-response curves of F_c + F_s extrapolated to zero light, R_LRC, and (3) with a detailed process-based forest ecosystem model, R_cast. At most sites respiration rates estimated using the u_*-filter, R_ust, were smaller than R_Rmax and R_LRC. Agreement of our approach with independent measurements indicates that R_Rmax provides an excellent estimate of nighttime ecosystem respiration.     

Understorey microclimate and crop performance in a Grevillea robusta-based agroforestry system in semi-arid Kenya

The influence of dispersed trees on microclimatic conditions, gas exchange and productivity of maize (Zea mays L.) in a Grevillea robusta-based agroforestry system in semi-arid Kenya was examined to test the hypothesis that the benefits of shade seen in savannah ecosystems may be outweighed by competition for below-ground resources. Meristem temperature, cumulative thermal time, intercepted radiation, spatial distribution of shade and gas exchange were determined for maize grown as sole crops, in an agroforestry system, or under shade nets providing 25 or 50% reductions in incident radiation to discriminate between effects of shade and below-ground competition. The major benefit of shade was to reduce exposure to the supra-optimal temperatures experienced in many tropical regions, and which are predicted to become increasingly common by climate change models. However, although trees decreased photosynthetic photon flux density (PPFD) incident on understorey maize by ca. 30%, the yield reduction was much greater than in the 25% shade net treatment in four seasons providing contrasting rainfall. Maize yield was unaffected by 50% artificial shade in the driest season (168 mm) but decreased with increasing shade when rainfall was high (628 mm). Shade reduced meristem temperature and delayed flowering by 5–24 days depending on treatment and seasonal rainfall. Thermal time to flowering in the agroforestry system doubled from 600 to 1200 °C day as rainfall decreased. Photosynthetic and transpiration rates for understorey maize were similar to the 25 and 50% shade treatments when rainfall was high, but were ca. 10% of those for unshaded sole maize in dry seasons. PPFD-saturated photosynthetic rate was initially similar in all treatments but fell sharply in the agroforestry system as the season progressed. Radiation conversion coefficients did not differ between unshaded sole and understorey maize. The results suggest that the ameliorative influence of tree shade was greater in low rainfall seasons, as in savannah systems, but that potential benefits were outweighed by below-ground competition. This may be managed by root-pruning trees.     

Demographics of cattle positive for Mycobacterium avium subspecies paratuberculosis by faecal culture,from submissions to the Cork Regional Veterinary Laboratory

The demography of bovine infections caused by Mycobacterium avium subspecies paratuberculosis (MAP) in Ireland is poorly defined. The objective of this study was to describe the demographics of cattle positive to MAP on faecal culture, based on submissions to the Cork Regional Veterinary Laboratory (Cork RVL) from 1994 to 2006. The study focused on all available faecal samples from adult cattle with non-responsive chronic diarrhoea that were submitted by private veterinary practitioners to Cork RVL for MAP culture. For each MAP-positive by faecal culture animal, data were collated from Cork RVL and Cattle Movement Monitoring Scheme (CMMS) records. Johne's disease (JD) was confirmed in 110 animals from 86 herds by the Cork RVL between 1994 and 2006, with a rate of positive cases between 15% and 18% over last four years of the study. Two breeds (Holstein/Friesian or Limousin) made up 78% of submissions. Movements were assessed for the 57 study animals with available movement information, 90% died within one year of the test and 26% tested positive in the herd they were born into. The study provides preliminary information about movement trends and demographics of animals with MAP positive submissions. Although the study area is restricted, it includes the most intensive (and economically-important) dairy region in Ireland. The demographics of JD infection from the study area are in agreement with international reports. Further work is required to determine demographic trends, incidence and prevalence of JD throughout Ireland. It is hoped this work may contribute to the development of a surveillance strategy for MAP by regional veterinary laboratories.     

早熟无限结荚习性大豆子粒生长特征

大豆产量潜力受到基因型和环境条件的制约。一种基因型的密度、植株分布决定其对太阳辐射、水分和养分的利用,进而高产的形成。当群体生长所需外界要素之一不能满足时,植株间形成竞争。产量的区域间及年际间差异与这种株间竞争关系密切,最终表现为单位面积内一个或多个产量构成因子的差异,如株荚数、荚粒数、或单粒重(籽粒大小)。本研究探讨籽粒大小在调节不同密度、行距条件下产量差异及年际间产量差异的作用。多点试验表明,籽粒大小在不同节位上及不同籽粒数的荚间差异不大。然而在2粒或3粒荚内,荚基部粒比中部及顶部粒小10%,而且子叶细胞体积差异不大。在改变源库、增强光照或遮阴条件下,籽粒大小发生变化。籽粒大小与子叶细胞数相关。籽粒大小是可塑的,但即使底部节位荚较顶部节位提前15~20 d鼓粒,籽粒大小在所有节位间差异不大,所以籽粒大小与子叶细胞数的关系仍值得探讨。