Selection,optimization and characterization of molecular tests for the detection of Tobacco ringspot virus (TRSV)

The aim of the study was to select, optimize and characterize RT‐PCR tests for the detection of Tobacco ringspot virus (TRSV) in post‐entry quarantine. Among five different tests, the Poojari et al. (Journal of Virological Methods 235, 112–118) and Jossey & Babadoost (Plant Disease 90, 1361) conventionnal RT‐PCR tests were chosen and optimized for this purpose. Ten TRSV isolates, 17 healthy plants from the genera Vitis, Prunus and Malus, four other Nepoviruses or Secoviridae isolates and serial dilutions of three TRSV isolates were used for the complete characterization of the optimized tests. In the tested conditions, the Poojari and Jossey & Babadoost tests respectively showed 100% and 95% inclusivity, 100% and 100% exclusivity, 100% and 96.4% analytical specificity, 100% and 100% diagnostic specificity, [10^?7; 10^?1] and [10^?8; 10^?2] limit of detection dilution factors (analytical sensitivity), 91.1% and 90.0% repeatability, 90.3% and 91.1% reproducibility and 100% and 100% selectivity. Due to its higher inclusivity, the optimized Poojari test is recommended for the detection of TRSV isolates for post‐entry quarantine purposes, but can also be used for global surveys. The optimized Jossey & Babadoost test showed the best analytical sensitivity, suggesting that combining both tests can further enhance detection.     

Assessing the efficacy and impact of management of an invasive species in a protected area: Poa annua on sub‐Antarctic Macquarie Island

Plant eradication is difficult, particularly in remote, protected areas. The Southern Ocean Islands are very isolated and highly protected, but the flora contains many alien plants. Small restricted populations have been eradicated, but eradication of established species has proven difficult. A better understanding of the efficacy of control methods at sub‐Antarctic temperatures and their off‐target impacts may increase eradication success. With interest in controlling non‐native Poa annua in the region, we aimed to determine if physical and chemical methods can control P. annua (the sub‐Antarctic biotype) in sub‐Antarctic conditions and examined their impact on native plants. We quantified the effectiveness of physical control methods on P. annua in situ on sub‐Antarctic Macquarie Island through field‐based experiments and assessed their selectivity on P. annua compared with native grasses. We also quantified the effectiveness of several herbicides on P. annua at sub‐Antarctic temperatures and assessed their selectivity on native grasses. Of the four physical disturbance methods tested, none effectively reduced P. annua cover as one‐off treatments. Of the herbicide treatments, glyphosate and trifloxysulfuron sodium were effective and were less damaging to native grass species, indicating potential selectivity. Physical control was of limited effectiveness, but did not affect native species richness. An integrated weed management programme utilising the strategic use of selective herbicides with follow‐up chemical and physical intervention may balance control and biodiversity outcomes. This research highlights the importance of site‐specific testing of control methods and understanding off‐target impacts of control when managing alien plant species in protected areas.     

Site‐specific management is crucial to managing Mikania micrantha

Increasingly, weeds have been taking on global distributions. With the proliferation of invasive weeds has come the challenge of managing these species over broad geographical regions, with diverse habitats and political jurisdictions. Here, we review the management of Mikania micrantha Kunth (Asteraceae; mile‐a‐minute) throughout its invaded range, extending through most of the Pacific islands and southern and south‐east Asia. Context matters when determining the best course of action for managing M. micrantha, as it has invaded a large variety of agricultural and natural systems. In Queensland, Australia and Florida, USA, M. micrantha has been targeted in relatively successful eradication campaigns, highlighting the importance of early detection and rapid response methods, while elsewhere in its invaded range, populations are either still increasing or showing limited signs of decline. An inter‐regional approach to research and management should incorporate successful management strategies employed throughout the invaded range including, but not limited to, chemical and cultural control practices, manual and mechanical control, classical biological control using the rust fungus Puccinia spegazzinii, plant–plant competition and integrated approaches utilising two or more control methods concurrently. Additional knowledge of M. micrantha genetics is required to determine if management approaches could be fine‐tuned for particular populations. Countries bordering the Mekong River formed a network in 2011 to co‐ordinate the management of invasive species such as M. micrantha. Expanding such a collaborative approach to other regions could further reduce populations of M. micrantha and limit its spread.     

The importance of reduced light intensity on the growth and development of six weed species

Crops limit light for photosynthesis and growth of weeds. We studied the effect of reduced light on performance of six weed species [one invasive species (Amsinckia micrantha), three common species (Veronica persica, Capsella bursa‐pastoris, Viola arvensis) and two less common weeds (Anagallis arvensis and Scleranthus annuus)]. In two glasshouse experiments, six light levels were achieved aiming at 0%, 20%, 50%, 80%, 90% and 95% reduction of light and corresponding with daily light integrals (DLI) of 12.4, 9.63, 7.13, 2.74, 0.95 and 0.69 mol m^?2 day^?1 in experiment 1 and 21.2, 18.0, 10.7, 3.71, 1.64 and 1.20 mol m^?2 day^?1 in experiment 2. The number of leaves was strictly controlled by DLI. Chlorophyll content index, maximum photochemical efficiency of photosystem II (F_v/F_m), stomatal conductance, flowering and dry matter were strongly reduced when DLI was reduced to 0.69–3.71 mol m^?2 day^?1 for all species. Threshold DLI for flowering was ca. 3.71 mol m^?2 day^?1 for S. annuus, V. arvensis, A. arvensis and V. persica, while C. bursa‐pastoris deviated by flowering at DLI of 0.95 mol m^?2 day^?1. This may explain why C. bursa‐pastoris is common in the seedbank of Danish arable soils in spite of intensive farming with well‐fertilised and dense crops.     

Median Lethal Concentration (LC50) of Piscicidal Plants and Their Utilization in Aquaculture

Aqueous and ethanol extracts of Acacia pennata (bark), Catunaregam uliginosa (fruit), Diospyros lenceofolia (fruit), and Sapindus mukorossi (fruit) were evaluated as piscicides on the freshwater fish Danio dangila, Danio rerio, and Puntius shalynius, and the air-breathing Heteropneustes fossilis. Catunaregam uliginosa (fruit) possessed relatively higher piscicidal potency followed by Sapindus mukorossi (fruit), Acacia pennata (bark), and lastly Diospyros lanceofolia (fruit). Catunaregam uliginosa can thus be used for eradicating unwanted wild fishes in a short time span at low concentrations so that the health of aquatic environment is maintained.     

The effect of phosphorus supplementation to common carp diets on fish growth

The effect of supplementation of fish diets with phosphorus was studied both in tank and pond experiments. In the tank experiments phosphorus (6.5% di-calcium or mono-calcium phosphates) was added to three diets: two containing fish meal as the main protein ingredient and the third containing algal meal to replace it. Feeding common carp in tanks with these diets significantly increased fish growth rate (P < 0.05) over fish fed the same diets without phosphorus supplementation. In the pond experiments phosphorus was added to a fish meal diet in two different compounds: mono- and di-calcium phosphates (at 1% of the feed). The diets were fed to fish in a polyculture system for two consecutive culture cycles. Due to supplementation with phosphate, growth rate of tilapia (Sarotherodon aureus) increased in both culture cycles. The growth rate of common carp fed phosphorus-supplemented diets increased over the control only in the first cycle, when fish were large and the standing crop of carp exceeded 1.8 ton/ha. At lower standing crops the natural food seems to supply adequate amounts of phosphorus. Silver carp were not affected by phosphorus supplementation, probably because they consume very little supplementary feed. Total yield for the entire season (kg/ha) was significantly higher in ponds where fish were fed a phosphorus-supplemented diet. Di-calcium phosphate, which is soluble only in weak acids, seems to be more efficient than the water-soluble mono-calcium phosphate in affecting the growth of common carp even though this fish lacks a gastric acid secretion.     

Betrachtung möglicher Auswirkungen des Klimawandels auf Schadpilze im Obstbau am Beispiel von Fruchtfäuleerregern an Äpfeln

Whereas the rise in temperature during the past 30–40 years has already had clear impacts on the phenology of fruit trees and pathogenic insects, there is a lack of such correlations for fungal pathogens. An examination of fruit rots indicates that pathogenic fungi react differentially to climate change due to their complex infection biology. The appearance of the black rot fungus Diplodia seriata in Northwestern Europe is best explained by rising temperatures during the vegetation period. An increase in fruit rot caused by Nectria galligena is anticipated when milder and more humid winter months favour canker formation on twigs and branches, thereby increasing inoculum for fruit infections. An increasing importance of Neofabraea alba and Glomerella cingulata and/or G.??acutata as storage rots of apples in Northern Germany cannot be safely correlated with the climate change at present. Research on fungi is currently being expanded at the OVB Jork in order to ensure a faster identification of new pathogens and a more thorough investigation of relevant features of their infection biology.     

Improved micropropagation protocol and enhancement in biomass and chlorophyll content in Stevia rebaudiana (Bert.) Bertoni by using high copper levels in the culture medium

Incorporation of a range of higher concentrations of CuSO₄·5H₂O in MS medium [Murashige, T., Skoog, F., 1962. A revised medium for rapid growth and bioassay with 240 tobacco tissue cultures. Physiol. Plant 15, 473–497] significantly enhanced direct shoot bud induction and proliferation from cultured leaf and nodal explants taken from mature plants of Stevia rebaudiana. Shoot bud induction medium was supplemented with BAP (2.2 μM) and IAA (2.8 μM). When the concentration of CuSO₄·5H₂O in the induction medium was raised to 0.5 μM (five times the MS level, i.e. 0.1 μM) there was significant increase in percentage response along with increase in shoot bud number per explant. The shoots were healthy, well developed with dark green broader leaves. There was remarkable increase in total biomass and chlorophyll content at increased (0.5 μM) copper level in the medium. During proliferation stage also presence of high copper levels in the medium favoured increase in shoot bud number per explant.     

Effect of a cytochrome P450 inhibitor on abscisic acid biosynthesis and stomatal regulation in citrus trees in water-stressed conditions

The effect of diniconazole, an inhibitor of cytochrome P450, on drought tolerance was examined in ‘Shiranui’ [(Citrus unshiu Marc. × Citrus unshiu Osbeck) × Citrus reticulate Blanco] trees. Diniconazole treatment increased abscisic acid (ABA) concentration in leaves compared with untreated controls in water-stressed conditions after 20 days of water-stress treatment. Diniconazole significantly decreased the stomatal aperture at 9 h after application compared with untreated controls in water-stressed conditions. The photosynthetic rate decreased in water-stressed conditions; however, regardless of the earlier stomatal closure induced by diniconazole application, the decrease of photosynthetic rate was delayed by the application.     

Micro-scaled high-throughput digestion of plant tissue samples for multi-elemental analysis

Background  

Quantitative multi-elemental analysis by inductively coupled plasma (ICP) spectrometry depends on a complete digestion of solid samples. However, fast and thorough sample digestion is a challenging analytical task which constitutes a bottleneck in modern multi-elemental analysis. Additional obstacles may be that sample quantities are limited and elemental concentrations low. In such cases, digestion in small volumes with minimum dilution and contamination is required in order to obtain high accuracy data.