Correlation of extractive components and body index with taste in oyster Crassostrea gigas brands

Fisheries Science - We investigated the free amino acid (FAA) composition, glycogen content, and body index of 31 brands of oyster Crassostrea gigas to evaluate their taste graphically using a...     

A review of tower flux observation sites in Asia

Aggregating and sharing the metadata of flux observation sites results in a strong collaboration among various fields of study. Such data sharing will also be a part of the future design of a tower flux observation network in Asia. The aim of this review is to comprehend the state of tower flux observation sites in Asia. There are 109 tower flux observation sites in Asia including 51 forest sites. There are more new sites under construction in Asia than in America and Europe. These sites range from the taiga in Siberia to the rainforest in Southeast Asia, and from the equatorial to polar Koeppen climate zones. There are many highly humid areas in Asia, not only at low latitudes but also at middle latitudes. This climate condition has developed unique vegetation such as lucidophyllous (evergreen broadleaf) forest, which is distributed in warm areas with high precipitation in the growing season. However, there are only a few observations taking place in lucidophyllous forest. Rice paddy fields are also unique land cover in Asia. It is important to accumulate long-term data for rice fields with their management records, because plant activity depends highly on both climate conditions and land-use management. Flux data, especially net ecosystem exchange and related elements, are used for widespread studies not only within the flux-research community but also in other fields of study, for example remote sensing. At present, however, both the quantity and quality of the data are not sufficient for these studies. Regarding the quantity, there are many recently established sites that have not published data yet; regarding quality, flux data include uncertainties caused by methodological problems. Flux researchers are required not only to obtain flux data but also to improve their quality. Meanwhile, data users must understand there are still uncertainties in flux data. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Changes in the concentrations of fumonisin,deoxynivalenol and zearalenone in corn silage during ensilage

We assessed the production of the mycotoxins fumonisin, deoxynivalenol and zearalenone during the ensiling of corn. Corn was harvested at yellow‐ripe or full‐ripe stage and separated into the stem and leaf parts and the ear parts, including bracts. Each material was ensiled under five conditions: (1) no fungus added, anaerobic conditions; (2) no fungus added, aerobic conditions; (3) mycotoxin‐producing fungus added, anaerobic conditions; (4) mycotoxin‐producing fungus added, aerobic conditions; and (5) mycotoxin‐producing fungus added to autoclaved material, aerobic conditions. After 40 days of ensilage, we analyzed the silage fermentative quality and mycotoxin concentration. The fermentative quality of all materials was good in treatments (1) and (3), because the pH < 4 increased the lactic acid content preventing mycotoxin levels from increasing. In treatments (2) and (4), fermentative quality of all materials was poor, and mycotoxin levels were slightly increased. In treatment (5), fermentative quality was poor, and mycotoxin levels were increased remarkably. These results indicate that mycotoxins are not produced under anaerobic conditions and are hardly produced under aerobic condition during the ensiling of corn. Our findings suggest that almost all mycotoxins in corn silage are produced pre‐harvest.     

A soil seed bank in a mature conifer plantation and establishment of seedlings after clear-cutting in southwest Japan

Compositions and spatial distribution patterns of buried viable seeds, and demographic transition from buried viable seeds to seedlings after clear-cutting were examined in a 75-year-old conifer plantation in southwest Japan. A part of the plantation was cleared in December 1997 and study plots were set up on a cleared site and a preserved site. Soil samples (a total of 105 l for the preserved plot and 90 l for the cleared plot) were collected from surface soils in spring 1998 and were incubated in a greenhouse for 120 days. There were an estimated 1064 buried viable seeds per square meter from 67 species in the preserved plot and 1754 seeds/m² from 53 species in the cleared plot. The soil seed bank was from mostly low density species with some high density species, and contained many pioneer species that were absent in the floor vegetation. Buried viable seeds were clumped together, especially in gravity-dispersal species. Although plenty of buried viable seeds were pooled in the soil, few seedlings emerged on the forest floor. In contrast, a number of seedlings, including many pioneer species, emerged in the cleared plots, showing a positive correlation between seed weight and germination rate. It is assumed that dominance of the seedlings established after clear-cutting depends on germination rates and/or growth rates of the seedlings rather than the initial density of buried viable seeds. These results suggest strong contribution of the soil seed bank to the establishment of the secondary vegetation after disturbance in a mature conifer plantation.     

Cold exposure increases slow‐type myosin heavy chain 1 (MyHC1) composition of soleus muscle in rats

The aim of this study was to examine the effects of cold exposure on rat skeletal muscle fiber type, according to myosin heavy chain (MyHC) isoform and metabolism‐related factors. Male Wistar rats (7 weeks old) were housed individually at 4 ± 2°C as a cold‐exposed group or at room temperature (22 ± 2°C) as a control group for 4 weeks. We found that cold exposure significantly increased the slow‐type MyHC1 content in the soleus muscle (a typical slow‐type fiber), while the intermediate‐type MyHC2A content was significantly decreased. In contrast to soleus, MyHC composition of extensor digitorum longus (EDL, a typical fast‐type fiber) and gastrocnemius (a mix of slow‐type and fast‐type fibers) muscle did not change from cold exposure. Cold exposure increased mRNA expression of mitochondrial uncoupling protein 3 (UCP3) in both the soleus and EDL. Cold exposure also increased mRNA expression of myoglobin, peroxisome proliferator‐activated receptor gamma coactivator 1α (PGC1α) and forkhead box O1 (FOXO1) in the soleus. Upregulation of UCP3 and PGC1α proteins were observed with Western blotting in the gastrocnemius. Thus, cold exposure increased metabolism‐related factors in all muscle types that were tested, but MyHC isoforms changed only in the soleus.     

Ecology of pitaya stem rot caused by Gilbertella persicaria and its biological control by phyllosphere bacteria

Gilbertella persicaria stem rot is a disease that causes rotting in the stem nodules and fruits of pitaya. Here, we aimed to study the ecology of G. persicaria and its biological control using several Bacillus subtilis strains isolated from the phyllosphere. Sporangiospores of G. persicaria were detected on different parts of the plant, with maximum density (c.239.9 propagules/cm²) found on the petals after flowering, and spore germination was observed to be considerably affected by humidity. Furthermore, the study revealed that an incision wound of at least 2 mm depth was necessary for infection by the pathogen to the stem nodule, and exposure to high temperatures (50°C) accelerated disease incidence, by disrupting resistance to the spread of the pathogen. Additionally, biological control of G. persicaria was effectively achieved by inoculation with B. subtilis strains isolated from pitaya stem nodules. Intriguingly, treatment with antagonistic bacteria reduced stem rot incidence to zero (bacterial suspension: PNB-5, PNB-7, and PNB-93; culture filtrate: PNB-7, PNB-93, and PNB-95), equivalent to that achieved by fungicide application in both prophylactic and simultaneous treatments. Collectively, this is the first study to demonstrate the ecology of G. persicaria and to show the potential applicability of phyllosphere bacterial strains for biological control of G. persicaria in pitaya, which could help develop effective integrated disease management strategies for the control of pitaya stem rot.     

A New Lyngbyatoxin from the Hawaiian Cyanobacterium Moorea producens

Lyngbyatoxin A from the marine cyanobacterium Moorea producens (formerly Lyngbya majuscula) is known as the causative agent of “swimmer’s itch” with its highly inflammatory effect. A new toxic compound was isolated along with lyngbyatoxin A from an ethyl acetate extract of M. producens collected from Hawaii. Analyses of HR-ESI-MS and NMR spectroscopies revealed the isolated compound had the same planar structure with that of lyngbyatoxin A. The results of optical rotation and CD spectra indicated that the compound was a new lyngbyatoxin A derivative, 12-epi-lyngbyatoxin A (1). While 12-epi-lyngbyatoxin A showed comparable toxicities with lyngbyatoxin A in cytotoxicity and crustacean lethality tests, it showed more than 100 times lower affinity for protein kinase Cδ (PKCδ) using the PKCδ-C1B peptide when compared to lyngbyatoxin A.     

Development of an enzyme-linked immunosorbent assay for the measurement of antibodies against infectious coryza vaccine

Infectious coryza is an acute respiratory disease caused by infection with Avibacterium (Haemophilus) paragallinarum. It is characterized by nasal discharge and facial swelling and is associated with growth retardation and a reduction in egg production. Hemagglutination inhibition (HI) tests are used to estimate vaccine-induced immunity against infectious coryza in vitro; however, these procedures are complicated and their sensitivity is insufficient. To address these problems, an enzyme-linked immunosorbent assay (ELISA) technique using serovar-specific regions of HMTp210 (210 kDa), an outer-membrane protein of A. paragallinarum, was developed to measure the antibodies against infectious coryza. Chickens with an ELISA titer of 0.3 or more did not exhibit clinical signs of infectious coryza against challenge with A. paragallinarum, although their HI antibody titers were negative. On the other hand, chickens with an ELISA titer below 0.3 exhibited clinical signs of the disease with one exception. Antibody prevalence rates on ELISA were 80% and 60% against infection with serovars A and C, respectively, and ELISA also detected antibodies in chickens infected with A. paragallinarum with a sensitivity higher than that of HI tests. Taken together, the ELISA technique developed in this study is a valuable tool for the measurement of antibodies produced against the infectious coryza vaccine or in response to an infection with A. paragallinarum.     

Swimming angle and target strength of larval Japanese anchovy (<Emphasis Type="Italic">Engraulis japonicus</Emphasis>)

The swimming angle of larval Japanese anchovy (Engraulis japonicus) was measured in a tank, and target strength (TS) was calculated using a theoretical scattering model. The mean swimming angle was 12.8° (SD ±22.1). Increased speeds of flow led to increased mean swimming angles. The mean swimming angle at flow of 5 cm s⁻¹ was higher than at other speeds. TS values were estimated using a distorted-wave Born approximation model for two cases. Average values were 1–3 cm s⁻¹ (11.5° ± 22.1) and 5 cm s⁻¹ (16.6° ± 21.7) for cases 1 and 2, respectively. For case 1, TS ranged from −92.0 to −74.7 dB with a mean of −79.4 dB at 120 kHz. For case 2, TS ranged from −92.2 to −75.2 dB with a mean of −79.9 dB. The mean TS in case 2 was lower than that in case 1, with the maximum difference being 1.0 dB at 120 kHz (standard length 22.0 mm). However, there were no significant differences between the regression lines of cases 1 and 2. Thus, changes in flow speed altered the swimming angle of larval Japanese anchovy, but had little influence on TS.     

Satellite cells produce neural chemorepellent semaphorin 3A upon muscle injury

Regenerative mechanisms that regulate intramuscular motor innervation. including configuration of the neuromuscular connections are thought to reside in the spatiotemporal expression of axon‐guidance molecules. Our previous studies proposed a heretofore unexplored role of satellite cells as a key source of a secreted neural chemorepellent semaphorin 3A (Sema3A) expression. In order to verify this concept, there is still a critical need to provide direct evidence to show the up‐regulation of Sema3A protein in satellite cells in vivo upon muscle injury. The present study employed a Sema3A/MyoD double‐immunohistochemical staining for cryo‐sections prepared from cardiotoxin injected gastrocnemius muscle of adult mouse lower hind‐limb. Results clearly demonstrated that Sema3A expression was up‐regulated in myogenic differentiation‐positive satellite cells at 4–12 days post‐injury period, the time that corresponds to the cell differentiation phase characterized by increasing myogenin messenger RNA expression. This direct proof encourages a possible implication of satellite cells in the spatiotemporal regulation of extracellular Sema3A concentrations, which potentially ensures coordinating a delay in neurite sprouting and re‐attachment of motoneuron terminals onto damaged muscle fibers early in muscle regeneration in synchrony with recovery of muscle‐fiber integrity.