Characterizing environmental and spatial variables associated with the incidental catch of olive ridley (Lepidochelys olivacea) in the Eastern Tropical Pacific purse‐seine fishery

In the Eastern Tropical Pacific (ETP), a region of high fishing activity, olive ridley (Lepidochelis olivacea) and other sea turtles are accidentally caught in fishing nets with tuna and other animals. To date, the interaction between fishing activity, ocean conditions and sea turtle incidental catch in the ETP has been described and quantified, but the factors leading to the interaction of olive ridleys and fishing activity are not well understood. This information is essential for the development of future management strategies that avoid bycatch and incidental captures of sea turtles. We used Generalized additive models (GAM) to analyze the relationship between olive ridley incidental catch per unit effort (iCPUE) in the ETP purse‐seine fisheries and environmental conditions, geographic extent and fishing set type (associated with dolphins, floating objects or in free‐swimming tuna schools). Our results suggest that water temperature, set type and geographic location (latitude, longitude and distance to nesting beaches) are the most important predictor variables to describe the probability of a capture event, with the highest iCPUE observed in sets made over floating objects. With the environmental predictors used, sea surface temperatures (SST) of 26–30°C and chlorophyll‐a (chl‐a) concentrations <0.36 mg m^?3 were associated with the highest probability of an incidental catch. Temporally, the highest probability of an incidental catch was observed in the second half of the year (June to December). Four regions were observed as high incidental catch hotspots: North and south of the equator between 0–10°N; 0–10°S and from 120 to 140°W; and along the Colombian coast and surrounding regions.     

Growth performance of juvenile pacu (Piaractus mesopotamicus) and dourado (Salminus brasiliensis) fed with lyophilized bovine colostrum

Growth performance was evaluated in juvenile pacu (Piaractus mesopotamicus) and dourado (Salminus brasiliensis) fed diets containing 0%, 10% and 20% of lyophilized bovine colostrum for 60 days. The performance variables of weight gain, relative weight gain, feed intake, feed conversion ratio, specific growth rate, total protein intake and protein efficiency ratio were evaluated as well as apparent digestibility coefficients of protein and energy in the diets. Inclusion of bovine colostrum did not induce differences in the performance of pacu and dourado (P > 0.05), indicating that the diets were adequate and met the nutritional needs of the juveniles. The protein digestibility in both species was improved with the inclusion of the bovine lacteal secretion. Based on the variables studied, the diets with lyophilized bovine colostrum inclusion were nutritionally suitable for both pacu and dourado indicating the possibility to use this lacteal secretion as a partial substitute of dietary protein.     

Post-fire production of mushrooms in Pinus pinaster forests using classificatory models

This study was aimed at describing post-fire mushroom production in a Mediterranean ecosystem dominated by Pinus pinaster Ait. in the northwest of Spain and assessing the results by classificatory models. During the autumn periods of 2003–2006, fruit bodies from 115 fungal taxa were collected in burned and unburned areas and were further grouped into the following categories: saprotrophic/mycorrhizal; and edible/non-edible. After wildfires, a significant reduction in the number of fungal species and fruit body biomass production was observed. Based on this relevant information, the first simple classificatory model for this aim is provided. Nine alternative models based on classifications according to combinations of edibility and functional groups were fitted, and four fruiting body biomass production classes were defined as possible responses. As explanatory factors, time after fire and climatic variables significantly related to fruit body production were included. The best predictive results were obtained for edible and edible-mycorrhizal models, for which the correct classification rate of production classes was between 92 and 85 %. Moreover, the models obtained were applied to analyse the effect of time after fire on fungal production. Mycorrhizal and edible fungal production after fire was classified into the lowest class, whereas saprotrophic and non-edible species followed a contrary trend. The classificatory models can be useful to optimise management and harvest of these increasingly appreciated non-timber forest resources.     

Single-step purification and evaluation of recombinant BP26 protein for serological diagnosis of Brucella ovis infection in rams

To investigate the value of the BP26 protein in the serological diagnosis of ovine brucellosis caused by Brucella ovis, recombinant BP26 protein was produced in Echerichia coli and purified for use in an indirect enzyme-linked immunosorbent assay (I-ELISA). The majority of the recombinant protein was recovered from the supernatant of sonicated recombinant E. coli cells in a soluble form. This facilitated the purification of the recombinant BP26 protein which was achieved by using ion-exchange chromatography. After one step of purification, the purity of the recombinant BP26 protein was analyzed by using SDS-PAGE, Coomassie blue staining, and Western blot with a monoclonal antibody (MAb) directed against the BP26 protein. The degree of purity appeared satisfactory so that it could be directly used in I-ELISA. Although the recombinant BP26-ELISA appeared less useful than I-ELISA using the B. ovis hot saline (HS) extract as antigen, the high number of sera from B. ovis infected rams found positive (90%) in the recombinant BP26-I-ELISA indicated that the BP26 protein may be an additional suitable antigen for serological diagnosis of B. ovis infection in rams.     

A protocol for the assay of arylesterase activity in soil

We set up a protocol for the assay of the arylesterase activity, using p-nitrophenyl acetate (p-NPA) as substrate, dimethylsulfoxide as solvent, modified universal buffer at pH 7.5, and determination of the reaction product (p-nitrophenol) after separation of non-hydrolysed p-NPA after reaction, and tested it using eight soils with a wide range of characteristics. Various incubation temperatures and times, pH values and substrate concentrations were also used to find the optimal conditions for the enzyme activity and to determine characteristics and kinetic parameters of soil arylesterase. Arylesterase activity was significantly correlated with total organic C, total N, and soil ATP content. Soil arylesterase activity showed a pH optimum at 7.5, optimal temperature between 55 and 65 °C and linear increase with incubation time. The K_m values ranged from 4.3 to 8.5 mM, the V_max values from 326 to 803 μmol p-NP g⁻¹ h⁻¹, with higher K_m values observed in soils with higher organic matter content. We conclude that the proposed assay protocol is suitable to determine the arylesterase activity in a wide range of soils.     

RESEARCH PROGRESS ON THE IMPACT OF NITROGEN DEPOSITION ON GLOBAL GRASSLANDS

● Grasslands in many regions of the world have been impacted by atmospheric nitrogen deposition. ● Nitrogen deposition commonly leads to reductions in species richness. ● Increases in biomass production is a common response to increased N deposition. ● In some parts of the world there has been limited research into the impacts of nitrogen deposition. Grasslands are globally-important ecosystems providing critical ecosystem services. The species composition and characteristics of grasslands vary considerably across the planet with a wide variety of different grasslands found. However, in many regions grasslands have been impacted by atmospheric nitrogen deposition originating from anthropogenic activities with effects on productivity, species composition and diversity widely reported. Impacts vary across grassland habitats but many show declines in species richness and increases in biomass production related to soil eutrophication and acidification. At a continental level there is considerable variation in the research effort that has been put into understanding the impacts of nitrogen deposition. In Europe, North America and parts of Asia, although there are unanswered research questions, there is a good understanding of N deposition impacts in most grassland habitats. This is not the case in other regions with large knowledge gaps in some parts of the world. This paper reviews the impacts of N deposition on grasslands around the world, highlighting recent advances and areas where research is still needed.     

The use of mobile devices with multi-tag technologies for an overall contextualized vineyard management

This paper describes a Viticulture Service-Oriented Framework (VSOF) which turns around context elements or tags that are placed in the field and which can be decoded by mobile devices such as mobile phones or PDAs. The tags are used to automatically associate a field location to the relevant database tables or records and also to access contextual information or services. By pointing a mobile device to a tag, the viticulturalist may download data such as climatic data or upload information such as disease and pest incidence in a simple way, without having to provide coordinates or any other references, and without having to return to a central office. This work is part of an effort to implement a large-scale distributed cooperative network in the Douro Demarcated Region in Northeast Portugal, a region in which the effort makes particular sense due to the extremely variable topography and mesoclimates. The possibility of exchanging contextualized information and accessing contextualized services in the field, using well-known devices such as cell phones, may contribute to increase the rate of adoption of information technology in viticulture, and contribute to more efficient and closer-to-the-crops practices.     

Effects of Biochar and Marble mud on Mine Waste Properties to Reclaim Tailing Ponds

The effects of biochar addition in improving soil physical properties are not clearly understood in mining tailings. The objective of this study was to determine the effects of three different types of biochars, in addition to marble mud (MM) and their mixtures, on the structural stability and water retention of mine wastes in Cartagena, Spain. Biochars were produced at 500 °C from pig manure (PM), cotton (Gossipium hirsutum L.) crop residues (CR) and municipal solid waste (MSW). Biochars were added to the mine waste (MW) along with MM and a control (no amendments added). These mixtures were incubated in cores for 90 days (25 °C). PM and CR mixed with MM decreased soil bulk density (from 0 · 98 g cm^‐3 to 0 · 89 and 0 · 84 g cm⁻³, respectively). Amendments had no significant effect on total porosity whereas they increased gas diffusion by 100%, except for MSW. MM improved the plant available water from 0 · 59 to 2 · 56 cm as its combination with biochars, extremely relevant in water scarce climates. The micropores were likely replaced by mesopores when application of PM, CR, MM, and biochars + MM and they improved water retention. Total carbon (TC) and total nitrogen (TN) increased by using biochars and MM and no significant effects were assessed on aggregates. In general, MM mixed with PM and CR derived biochar improved the structural stability and exhibited a strong impact in reclaiming physical quality on mine tailings. Copyright © 2016 John Wiley & Sons, Ltd.