Biometrical, biological, biochemical and molecular characteristics of Meloidogyne incognita isolates and related species

Meloidogyne incognita is one of the most polyphagous species of root-knot nematodes occurring in Brazil and worldwide. Eight M. incognita isolates were studied, representing two enzymatic phenotypes (esterase and malate desydrogenase: I1/N1, I2/N1) and four cryptic Meloidogyne sp.1 (S2/N1) isolates, representing one cytological type (3n?=?40–46). Three M. hispanica isolates (Hi3/N1, 2n?=?32–36) and two of an atypical Meloidogyne sp.2 (S2a/N3, 3n?=?40–44) were included in this study for comparison. All isolates were tested with three M. incognita-specific molecular markers. The primer pairs B06F/R, miF/R and incK14F/R amplified three species-specific fragments of 1,200?bp, 955?bp and 399?bp, respectively for M. incognita and Meloidogyne sp.1 isolates. No amplification occurred in the M. hispanica and Meloidogyne sp.2 isolates, except with primers miF/R (1,650?bp). The genetic variability of the Meloidogyne spp. isolates was evaluated, using RAPD and ISSR markers. The phylogenetic analyses revealed two strongly supported monophyletic clades: clade I, consisting of M. hispanica and the atypical Meloidogyne sp.2 isolates, and clade II, clustering together all M. incognita and the Meloidogyne sp.1 isolates. Considering the biometrical, cytological and molecular approaches, it was possible to conclude that the isolates with three enzymatic phenotypes (I1/N1, I2/N1 and S2/N1) presented the characteristics described for M. incognita. Some correlations were detected between the isozymatic phenotypes and the tree topology (S2a/N3, Hi3/N1, I1/N1, S2/N1), but no strict correlation could be observed for the phenotype I2/N1 and one isolate of S2/N1. Morphologically, the Msp.2 isolates differ from M. incognita and M. hispanica by the female stylet features presenting straight cone tip and round pear shaped knobs, posteriorly sloping. The results of this study suggested that the Msp.2 isolates with phenotypes S2aN3 belong to a new or an unidentified species closely related to M. hispanica.     

The dispersal of Culicoides brevitarsis in eastern New South Wales and associations with the occurrences of arbovirus infections in cattle

Distributions of the vector Culicoides brevitarsis Kieffer (Diptera: Ceratopogonidae) (determined from light trap data) and 2 arboviruses (determined from seroconversions in sentinel cattle) were studied in eastern New South Wales in 1993–94. C brevitarsis was recorded progressively from endemic areas on the north coast, to Nowra on the south coast, and westward to Scone, in the Hunter Valley. C brevitarsis also survived through winter at Paterson, in the Hunter Valley. Its apparently focal reappearance in this marginal area had no obvious effect on the broad pattern of its progression or the dispersal of Akabane and bluetongue viruses. These viruses were first recorded from foci near Coffs Harbour, on the mid-north coast. Their first occurrences at different locations were associated with those of C brevitarsis, but not with each other. The viruses were found only within the recorded limits of the vector's distribution. Delays between the initial occurrence of C brevitarsis and first evidence of virus transmissions at locations ranged from 2 to 7 months. The delays decreased away from the points of focus and were negatively associated with the time of initial occurrence of the vector. Seroconversions to the viruses were related to the presence of C brevitarsis. However, the densities of C brevitarsis had no apparent effect on the initial numbers of cattle seroconverting to either virus. The results support the conclusion that the progressions of C brevitarsis and Akabane and bluetongue viruses were the result of gradual movements by the vector.     

Genetic diversity of apricot revealed by a set of SSR markers from linkage group G1

Eight polymorphic simple sequence repeat (SSR) markers located in the G1 linkage group of apricot (Prunus armeniaca L.) were previously developed and evaluated in a small set of cultivars. Those primers were used for studying variability in 77 apricot cultivars belonging to five different geographical groups, such as Chinese, Asian (Irano-Caucasian and Central Asian), North American, Mediterranean and Western European as well as Middle European cultivars. Six of the markers were polymorphic and revealed a total of 71 alleles ranging from 5 (aprigms11) to 20 (aprigms1) alleles per locus with a mean value of 11.83 alleles per locus. In conclusion, the SSR loci located in the G1 linkage group show a level of polymorphism which is similar to loci dispersed throughout the entire genome. The total number of alleles and the number of unique alleles were the highest in Chinese apricots and the lowest in Middle European cultivars. Heterozygosity also showed a decrease from Asia and China to Middle Europe. No association could have been observed between any SSR markers tested and plum pox virus (PPV) resistant phenotype of cultivars. PPV resistant cultivars did not form a separate clade on the dendrogram obtained by UPGMA cluster analysis. Middle European and Chinese cultivars formed separate clusters while other genotypes formed smaller multiple sub-groups or scattered among different clusters. Our results support previous hypotheses on the origin of PPV resistance in North American apricots. The allele data was also presented in a form that allowed the easy observation of allele frequencies in each geographical group at each locus. Using this data field, differences and similarities between cultivar groups can be easily assessed. The analysis demonstrated the links between the North American and Mediterranean apricot germplasm and confirmed that the Chinese and Eastern European cultivars are distantly related.     

Effects of Soluble Silicate and Nanosilica Application on Rice Nutrition in an Oxisol

Silicon(Si) has been supplied to plants via application of calcium silicate to soil; however, high doses of calcium silicate are required because of its low solubility. Nanoparticles can reduce Si doses and be applied to seeding furrows. This study investigated the effects of liquid Si sources, i.e., highly soluble silicate(115.2 g L~(-1) Si and 60.5 g L~(-1) Na_2O) and nanosilica( 200 nm), on Si uptake by rice plants, plant lignification, plant C:N:P stoichiometry, plant physiology, and grain yield using an Oxisol under greanhouse condistions. The treatments included the application of nanosilica and soluble silicate to seeding furrows at Si doses of 0, 605, 1 210,and 2 420 g ha~(-1). Plant uptake and treatment effects were evaluated by measuring C and lignin contents, Si, N, and P accumulation,physiological characteristics, and grain yield of rice. The deposition of silica bodies and amorphous silica in the flag leaves was analyzed using scanning electron microscopy. Application of liquid Si increased Si accumulation in rice by 47.3% in relation to the control(0 g ha~(-1) Si), regardless of the Si sources used. Nanosilica application increased leaf lignin content by 112.7% when compared to that in the control. Silicon moderately affected the net C assimilation(increased by 1.83%) and transpiration rates(increased by 48.3%);however, Si influenced neither plant growth nor grain yield of rice. These results are explained by the lack of biotic or abiotic stress in rice plants during the experiment. To the best of our knowledge, in Brazilian agriculture, this is the first report on the use of nanosilica as a Si fertilizer and its effect on plant nutrition. This study provides evidence that rice plants absorb and accumulate nanoparticles;however, further studies are required to investigate the use of nanoparticles in other plant species.     

Saline water and MSW compost: Effects on yield of maize crop and soil responses

A field experiment was carried out in Southern Italy from 2007 to 2010 adopting a two-year rotation of tomato and maize. In this paper, the results of maize cultivation were reported, with the aim to investigate the effects of different water qualities and fertilizers on yield and soil properties. The following treatments were compared: mineral nitrogen (N) fertilizer and irrigation with fresh water (FWF); mineral N fertilizer and irrigation with saline water (SWF); Municipal Solid Waste (MSW) compost and irrigation with fresh water (FWC); MSW compost and irrigation with saline water (SWC). These treatments were compared with an unfertilized control and irrigation with fresh-water (FW0) and an unfertilized control and irrigation with saline water (SW0). At harvest, yield, grain moisture content, dry matter, grain protein, starch, fat content and soil characteristics were determined. The treatments with compost increased the average grain yield of the 11% compared to mineral fertilizer treatments. Furthermore, the grain yield in SWC increased of the 19% respect to average of SWF and SW0, indicating that MSW compost applied as amendment mitigated the adversely effects of saline water. Compost application significantly increased the Total Organic Carbon (TOC). In particular, the FWC and SWC treatments showed an average increase of the 25% compared to the mean TOC value of FWF and SWF. Moreover, at the end of the experiment, electrical conductivity decreased in SWC treatment respect to the SWF (?21%).     

Impact of stand age on soil C, N and P dynamics in a 40-year chronosequence of alder-cardamom agroforestry stands of the Sikkim Himalaya

The impact of age (5, 10, 15, 20, 30, 40 years) on chemical characteristics of mineral soil under an age sequence of alder-cardamom agroforestry stands was studied in the Eastern Himalayas. The seasonal variation in soil organic carbon (OC), soil organic matter (SOM), total nitrogen (TN), forms of phosphorus (total P, organic P, inorganic P, available P, fractionated forms of P), mineral nitrogen, potential N mineralization and nitrification was measured in the chronosequence across three replicate sites each having six representative stand ages. We hypothesized that nutrient stocks would be lower in younger agroforestry stands, would eventually increase with stand age due to the influence of alder but then decline as the stands mature further. The expected pattern of increasing soil nutrient stocks with stand age did occur with a peak at 15–20 years; nutrient stocks then substantially declined in 30- to 40-year-old stands. A significant seasonality, which coincided with cardamom flowering and fruiting, was observed in soil nutrient contents and N transformation rates. The 15–20-year-old stands had the highest nutrient pools and potential N transformation rates, whereas the youngest and oldest stands had the lowest nutrient pools. Soil acidity increased with stand age. Soil pH was negatively related to stand age and SOM in the linear regression. Nutrient dynamics varied with age depending on the successional stage, which limited soil nutrient availability for plant uptake after the 20-year point. The performance of both alder and cardamom was reduced after this age likely due to limited soil nutrient availability and nutrient dynamics as a result of recurrent biomass removal – part of the traditional management practice. This study concludes that the ecological and economic sustainability of this particular agroforestry system is possible by adopting a 20-year re-plantation cycle for alder and cardamom, and a phase-wise agroforestry rotation.     

Role of Fatty Acids in Energy Provision During Oocyte Maturation and Early Embryo Development

While much is known about the metabolism of exogenous nutrients such as glucose, lactate, pyruvate, amino acids by oocytes and pre-implantation mammalian embryos, the role of endogenous stores, particularly lipid, has been largely overlooked. The presence of lipid within oocytes and early embryos has been long known, and comparisons between species indicate that the amounts and types of lipid present vary considerably. Large amounts of intracellular lipid can compromise the success of cryopreservation and the removal of such lipid has been the subject of considerable effort. In this review, we present evidence that strongly suggests a metabolic role for lipid, specifically with regard to energy provision, in the late-stage oocyte and the pre-implantation embryo. We focus initially on oxygen consumption as a global indicator of metabolic activity, before reviewing different approaches that either have been designed to investigate directly, or have revealed indirectly the role of endogenous lipid in energy generation. These fall under five headings: (i) fatty acid oxidation; (ii) inhibition of triglyceride oxidation; (iii) culture in the absence of exogenous substrates; (iv) cytoplasmic organization; and (v) delipidation. On the basis of the data derived from these studies, we conclude that there is strong evidence for the utilization of endogenous lipid as an energy substrate by oocytes and early embryos.