Towards a better mechanistic understanding of edge effects

Context

Predicting and managing edge effects requires an understanding of the mechanisms that drive them. However, analytical methods that dominate edge effects research are not well suited to discriminating mechanisms, because they do not measure ‘indirect’ edge effects: effects that are mediated by covariates in statistical models.

Objective

To discuss the value of indirect effects for improving mechanistic understanding of edge effects.

Methods

We explain how measuring indirect effects improves mechanistic understanding, and provide guidance on how to do so. We also conduct a literature review to examine awareness of indirect effects in empirical studies of mechanisms underpinning edge effects. Finally, we use a recent paper in Villaseñor et al. (Landscape Ecol 30:229–245, 2015) as a case study to discuss how failure to measure indirect edge effects may limit mechanistic understanding.

Results

Indirect effects provide a means to translate conceptual models of edge effects into mechanistic pathways that are testable and quantifiable. Moreover, failure to measure indirect edge effects can result in impacts of habitat edges being underestimated. However, few studies that we identified in our literature review quantified indirect effects (7 %, n = 72). Worryingly, 11 % of studies did not account for indirect effects despite using statistical models that potentially contained them, possibly resulting in incorrect inference.

Conclusions

A better awareness of indirect effects will help researchers to understand the mechanisms that underpin edge effects, while ensuring that impacts of habitat edges are not underestimated.

     

Syndromic survey and molecular analysis of influenza viruses at the human–swine interface in two West African cosmopolitan cities suggest the possibility of bidirectional interspecies transmission

Influenza viruses are frequently transmitted between pigs and their handlers, and among pig handlers. However, reports on socio‐environmental variables as potential risk factors associated with transmission of influenza in West African swine production facilities are very scarce. Syndromic survey for influenza was therefore conducted in Ibadan, Nigeria, and Kumasi, Ghana, in order to identify and elucidate selected socio‐environmental variables that may contribute to the occurrence and distribution of influenza‐like illness (ILI) among swine industry workers. In addition, molecular analyses were conducted to elucidate the nature of influenza viruses circulating at the human–swine interface in these cities and better understand the dynamics of their transmission. Influenza viruses were detected by type‐specific and subtype‐specific RT–PCR. Sequencing and phylogenetic analyses were carried out. Socio‐environmental variables were tested by both univariable and multivariable regression methods for significance at p < 0.05. Three risk factors for ILI were identified in each city. These included “frequency of visit of pig handler to pig pen or lairage” (Ibadan: risk ratio [RR] = 1.54, 95% confidence interval [CI] = 1.36–1.79, p = 0.02; Kumasi: RR = 1.28, 95% CI = 1.11–1.71, p = 0.01) and “pig handler's awareness about biosecurity measures” (Ibadan: RR = 7.09, 95% CI = 2.36–21.32, p < 0.001; Kumasi: RR = 4.84, 95% CI = 1.98–11.80, p < 0.001). Influenza A(H1N1)pdm09 viruses, with M genes closely related to those which circulated among pigs in the two cities during the same period, were detected among Nigerian and Ghanaian pig industry workers. These findings suggest the possibility of bidirectional transmission of influenza at the human–swine interface in these cities and underscore the need for more extensive molecular studies. Risk factors identified may assist in the control of human‐to‐human and human‐to‐swine transmission of influenza in the West African swine industry.     

Twinning rate in buffaloes: A case report

The information of twin pregnancy frequencies in buffaloes is scarce in the literature. Evidence even indicates that twin pregnancies are not carried to term, but it does not seem to be the case. In this case report, the event of twin pregnancy in buffaloes is reported as well as its frequency. Twin birth is the presence of two or more embryos in a single gestation. Multiple births are uncommon in buffaloes since the species is uniparous. We studied a population of Murrah buffaloes in which slightly more than 13,000 births were observed. In this study, the frequency of occurrence of twin births in Murrah buffaloes was 0.14%. This low incidence impaired the estimation of genetic parameters. Twins can have advantages and disadvantages depending on the production system, which are discussed in this case report.     

Is invasion of deforested Amazonia by the earthworm Pontoscolex corethrurus driven by soil texture and chemical properties?

Pontoscolex corethurus (Müller, 1857) is the most common invasive earthworm in disturbed lands in the tropics. Conditions required for its successful colonization of new plots are still not understood since some areas can be invaded while others, sometimes in the vicinity, are not. We kept newly hatched P. corethrurus in a wide range of Amazonian soils where population densities had been previously evaluated. We identified soil conditions that best sustain survival, soil ingestion and growth of P. corethrurus in controlled laboratory conditions and checked if presence/absence in the field was consistent with laboratory observations. While pH and Ca influenced survival; Mg and C content were the greatest determinants for growth and C:P, Mg and clay contents determined soil ingestion rates. Soil ingestion and growth rate were correlated. There were no differences in earthworm soil ingestion rates between invaded and non-invaded soils. However, growth rate and survival were higher in soils from invaded sites than in soils from non invaded sites, indicating that soil quality may play a role in the invasion process. We identified two cases where P. corethrurus did not occur: (1) unfavourable soil texture and chemical properties, but also some areas with and (2) favourable soil texture and chemical properties but no invasion. Other parameters, like vegetation cover (grass or trees), soil structure and compaction, soil hydrologic processes or biotic resistance of native earthworm communities could potentially also be key elements for understanding why P. corethrurus populations occur in some sites and not in others.     

Severe drought-induced community tolerance to heat wave. An experimental study on soil microbial processes

Purpose

The purposes of this study were to identify the influence of a severe drought period on the impact of a subsequent heat–drought disturbance on the microbial community of a Mediterranean agricultural soil and particularly to highlight the long-term effects on the microbial catabolic profiles.

Materials and methods

We performed an experiment in microcosms and applied the MicroResp? method on soil microbial communities.

Results and discussion

A 21-day combined heat–drought disturbance had less impact on soil microbial communities pre-exposed to a 73-day severe drought than on those that were not pre-exposed. These differences were observed not only for biomass and physiological traits (basal respiration, qCO₂), but also for catabolic microbial structure evolution during the recovery time.

Conclusions

These observations suggest that the physiological stress imposed by the initial severe drought changed the microbial catabolic structure or physiological state and favoured a portion of the microbial community best adapted to cope with the final heat–drought disturbance. Consequently, the initial severe drought may have induced a community tolerance to the subsequent heat wave. In this study, we also note that resilience was, more than resistance, an indicator of pre-exposure to stress. In the context of assessing the effects of extreme climatic events on soil microbial processes, these results suggest that future studies should take into account the historic stress of habitats and resilience parameters.

     

A Study on Al(III) and Fe(II) Ions Sorption by Cattle Manure Vermicompost

Cattle manure vermicompost has been used for the adsorption of Al(III) and Fe(II) from both synthetic solution and kaolin industry wastewater. The optimum conditions for Al(III) and Fe(II) adsorption at pH?2 (natural pH of the wastewater) were particle size of ≤250?µm, 1 g/10 mL adsorbent dose, contact time of 4 h, and temperature of 25°C. Langmuir and Freundlich adsorption isotherms fitted reasonably well in the experimental data, and their constants were evaluated, with R ² values from 0.90 to 0.98. In synthetic solution, the maximum adsorption capacity of the vermicompost for Al(III) was 8.35 mg g^?1 and for Fe(II) was 16.98 mg g^?1 at 25°C when the vermicompost dose was 1 g 10 mL^?1, and the initial adjusted pH was 2. The batch adsorption studies of Al(III) and Fe(II) on vermicompost using kaolin wastewater have shown that the maximum adsorption capacities were 1.10 and 4.30 mg g^?1, respectively, at pH?2. The thermodynamic parameter, the Gibbs free energy, was calculated for each system, and the negative values obtained confirm that the adsorption processes were spontaneous.     

Growth performance and carcass characteristics of broiler chickens fed diets supplemented with graded levels of charcoal from maize cob or seed of <Emphasis Type="Italic">Canarium schweinfurthii</Emphasis> Engl

Growth performances and carcass characteristics of broiler chickens fed diets supplemented with graded levels of Canarium schweinfurthii Engl seed (charcoal A) or maize cob (charcoal B) were studied using a total of 110 3-week-old male chicks. 11 experimental diets including a control and other containing either 0.2, 0.4, 0.6, 0.8 or 1% charcoal from C. schweinfurthii Engl seed (A_0.2, A_0.4, A_0.6, A_0.8, and A_1%, respectively) or from maize cob (B_0.2, B_0.4, B_0.6, B_0.8, and B_1%, respectively) supplements were used. Each of the diets was fed to ten individually birds caged in a completely randomized design. Results indicated that birds fed 0.2, 0.4, and 0.6% of either charcoal A or B had significantly (P < 0.05) higher final body weights as compared to control birds, while, above 0.6% slightly depressed average final body weights and weight gain. The best growth performance was achieved with 0.2% inclusion of charcoals. There was no significant (P > 0.05) influence of charcoal B on the overall feed intake. Only the B_0.6 feed significantly (P < 0.05) improved feed conversion ratio as compared with the control. Dressing percentage, liver weight and abdominal fat were not significantly (P > 0.05) affected by charcoal. However, there was a significant (P < 0.05) reduction in gizzard weight with charcoal B. Charcoal had no significant (P > 0.05) influence on intestine length and weight. More than 0.6% of charcoal A significantly (P < 0.05) depressed intestine density. It was concluded that under the conditions of this study, charcoal from maize cob or Canarium seeds could be used to improve growth performances and some carcass traits in broiler chickens.     

Factors associated with high psychological distress in horse industry participants during the 2007 Australian equine influenza outbreak and evidence of recovery after 1 year

This short report summarises data on the prevalence of high psychological distress in horse industry participants during the 2007 Australian equine influenza (EI) outbreak and the statistical analysis undertaken to identify the factors associated with this high psychological distress. In addition, follow-up data collected 1 year later are reported briefly.     

Limiting factors and landscape connectivity: the American marten in the Rocky Mountains

In mobile animals, movement behavior can maximize fitness by optimizing access to critical resources and minimizing risk of predation. We sought to evaluate several hypotheses regarding the effects of landscape structure on American marten foraging path selection in a landscape experiencing forest perforation by patchcut logging. We hypothesized that in the uncut pre-treatment landscape marten would choose foraging paths to maximize access to cover types that support the highest density of prey. In contrast, in the post-treatment landscapes we hypothesized marten would choose paths primarily to avoid crossing openings, and that this would limit their ability to optimally select paths to maximize foraging success. Our limiting factor analysis shows that different resistant models may be supported under changing landscape conditions due to threshold effects, even when a species’ response to landscape variables is constant. Our results support previous work showing forest harvest strongly affects marten movement behavior. The most important result of our study, however, is that the influence of these features changes dramatically depending on the degree to which timber harvest limits available movement paths. Marten choose foraging paths in uncut landscapes to maximize time spent in cover types providing the highest density of prey species. In contrast, following landscape perforation by patchcuts, marten strongly select paths to avoid crossing unforested areas. This strong response to patch cutting reduces their ability to optimize foraging paths to vegetation type. Marten likely avoid non-forested areas in fragmented landscapes to reduce risk of predation and to benefit thermoregulation in winter, but in doing so they may suffer a secondary cost of decreased foraging efficiency.