Retrospective analysis of the influence of environmental drivers on commercial stocks and fishing opportunities in the Irish Sea

Irish Sea fisheries have undergone considerable change in recent years following the decline of commercially important finfish stocks and their slow response to management's recovery plans. In 2015, the fishing industry called for a holistic exploration into the impact of environmental change and food web effects to identify the drivers underpinning stock dynamics. In this study, we identify correlations between large‐scale climatic indicators, temperature, primary and secondary productivity, and fish recruitment in the Irish Sea and incorporate them into an Ecopath with Ecosim food web model co‐created by scientists and fishers. Negative correlations were found between the North Atlantic Oscillation winter index (NAOw) and large zooplankton abundance and between the Atlantic Multidecadal Oscillation (AMO) and the recruitment of cod (Gadus morhua) and whiting (Merlangius merlangus). Using correlation analyses to direct the addition of environmental drivers to the Irish Sea ecosystem model improved the models fit against observed biomass and catch data and revealed the indirect impacts of environmental change as mitigated through trophic interactions. Model simulations suggest that historic environmental change suppressed the overall production of commercial finfish, limiting opportunities for the fishing industry, whilst also dampening the rate of stock recovery despite marked reductions in fishing effort. These results suggest that failure to account for ecosystem information may lead to misconceived expectations and flawed fisheries management; therefore, there is a need to operationalize ecosystem information through management procedures to support fisheries advice.     

Effect of dietary supplementation of inulin and W. cibaria on haemato‐immunological parameters of hybrid surubim (Pseudoplatystoma sp)

The dietary supplementation of prebiotics, probiotics and symbiotic in hybrid surubins (a Pseudoplatystoma corruscans and P. fasciatum cross) was evaluated for the effects on their autochthonous intestinal microbiota and on haematological and immunological parameters. A total of 160 fish were divided into four treatment groups with four replicates each. The treatment groups were fed with the following diets for 15 days: control diet without supplementation; 0.5% inulin (prebiotic) supplementation; Weissella cibaria (CPQBA 001‐10 DRM 02) (7.87 ± 0.2 log CFU g^?1) supplementation; or 0.5% inulin and W. cibaria supplementation (symbiotic group). The midgut intestines of the fish with the symbiotic diet supplementation had higher concentrations of lactic acid bacteria (7.07 ± 1.11 log CFU g^?1) and low levels of Vibrio spp (1.90 ± 0.60 log CFU g^?1) and Pseudomonas spp (2.23 ± 1.48 log CFU g^?1). In addition, increased erythrocytes and reduced circulating neutrophils were observed in this group. No differences in blood glucose, serum protein or lysozyme levels were detected between treatment groups. However, a higher concentration of total immunoglobulin was observed in fish fed with the probiotic and symbiotic diets. The addition of 0.5% inulin (prebiotic) thus W. cibaria (probiotic) to the diet of Pseudoplatystoma hybrid surubins reduce the number of pathogenic bacteria and stimulate the beneficial intestinal microbiota and may possibly alter their immune defence system.     

Infectious haematopoietic necrosis virus from salmonids cultured in Korea

Abstract. Four isolates of infectious haematopoietic necrosis virus (IHNV) were obtained from rainbow trout, Oncorhynchus mykiss (Walbaum), and masu salmon, Oncorhynchus masou (Walbaum), fry during epizootics at hatcheries in Korea. The four isolates of IHNV were compared with three from salmonids in the USA (SRCV, OSV and RB-76) by analysis of virion proteins in sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE) and neutralization tests, with two monoclonal antibodies raised against SRCV (MAb SRCV/A4) and RB-76 (MAb RB/B5). Based on the antigenicity and the size of the structural proteins, one Korean isolate from masu salmon (SCS) is similar to RB-76 and is an electropherotype 1. The other three isolates from rainbow trout (PRT, YRT and MRT) were identical to each other in the mobilities of their virion proteins in SDS-PAGE, and although their nucleocapsid (N) proteins comigrated with that of the RB-76 isolate, they differed from RB-76 in the smaller matrix 2 (M2) protein they contained. In addition, the three Korean isolates (PRT, YRT and MRT) could be divided into two groups by reactivity with MAb RB/B5. While the YRT isolate was neutralized by this MAb, the PRT and MRT isolates were not, suggesting that there are at least two neutralizing antigenic variants of IHNV in Korea.     

The disease status of Australian salmonids: bacteria and bacterial diseases

Abstract. Eleven freshwater salmonid hatcheries in southern Australia were surveyed for bacterial pathogens and diseases between 1981 and 1985, Twenty-five populations of fish were examined in the study, representing a total of 2755 fish, from which kidney, liver, spleen, and in some cases peritoneum, blood and faeces were cultured. Bacteria of pathogenic significance isolated included Aeromonas hvdrophila, Streptococcus sp., Lactobacillus piscicola, Yersinia ruckeri, Mycobacterium fortuitum, M. chelonei and a filamentous acid-fast organism of uncertain taxonomic position. Lacto-bacillus piscicola and Streptococcus sp. were associated with clinical and subclinical peritonitis. Mycobacterium chelonei was isolated from visceral granulomas in an externally normal fish. Aeromonas salmonicida, Renibacterium salmoninarum and Edwardsiella tarda were not isolated, indicating that the diseases furunculosis, bacterial kidney disease and edwardsiellosis are exotic to Australian salmonids. Similarly, while Y. ruckeri was isolated, enteric redmouth disease had not been recorded and is considered an exotic disease.     

Phylogenetic analysis of bacterial communities in the shrimp and sea cucumber aquaculture environment in northern China by culturing and PCR–DGGE

In this study, we investigated the bacterial communities in the shrimp and sea cucumber culture environment, including shrimp ponds (SP), sea cucumber ponds (SCP), mixed-culture ponds (MCP) and the effluent channel (EC) in Qingdao, China. Bacteria cultivation showed that the counts of heterotrophic, nitrate-reducing and sulfate-reducing bacteria in the sediment of SP were higher than that in the sediment of SCP and MCP, varying between 8.7 × 10⁴ and 1.86 × 10⁶, 2.1 × 10⁴ and 1.1 × 10⁵, and 9.3 × 10¹ and 1.1 × 10⁴ CFU g^?1, respectively. In contrast, the counts of ammonium-oxidizing and nitrifying bacteria in the sediment of SP was lower than that in the sediment of SCP and MCP. Denaturing gradient gel electrophoresis (DGGE) of 16S rDNA gene and dendrogram analyses showed that bacterial diversity in the mixed-culture environment was higher than that in the monocultures. The similarity of bacterial community between EC and SCP or MCP was higher than that between EC and SP. These results indicated that sea cucumber culture played a significant role in influencing the environmental bacterial communities that were composed mainly of Flavobacteriaceae (64.3%), Bacteriodetes (21%) and delta proteobacteria (14.7%), including the genera of Croceimarina, Lutibacter, Psychroserpens and so on. The results explained the benefit of sea cucumber culture in shrimp ponds at the level of microbial ecology.     

The influence of antibiotics on the immune system: immuno-pharmokinetic investigations on the primary anti-SRBC response in carp, Cyprinus carpio L., after oxytetracycline injection

Abstract. The present study was performed to obtain further details on the immuno-modulating effects of oxytetracycline (OTC) in carp, Cyprinus carpio L. The immuno-logical study was extended by investigating the pharmacokinetic behaviour of OTC. Oxytetracycline, at a dosage of 60 mg/kg, was administered five times intra-peritoneally at 3-day intervals; the first injection was given 1 day before immunization. The kinetics of the primary anti-sheep red blood cell (SRBC) response, during a short-term OTC treatment revealed that the kinetics of the plaque-forming cell (PFC) response was not significantly affected by OTC nor its solvent. In contrast, the number of plaque-forming cells was significantly decreased. The anti-SRBC antibody production was delayed by 2–4 days in both experimental groups (OTC and solvent). However, within 12–14 days post-immunization, the same antibody levels were detected as in the control group. High OTC plasma levels (>50 μg/ml) were detected about 10 h after a single i. p. injection. A mean plasma elimination half-life (T¹/₂) of 34·5 h was calculated.     

Betrachtung möglicher Auswirkungen des Klimawandels auf Schadpilze im Obstbau am Beispiel von Fruchtfäuleerregern an Äpfeln

Whereas the rise in temperature during the past 30–40 years has already had clear impacts on the phenology of fruit trees and pathogenic insects, there is a lack of such correlations for fungal pathogens. An examination of fruit rots indicates that pathogenic fungi react differentially to climate change due to their complex infection biology. The appearance of the black rot fungus Diplodia seriata in Northwestern Europe is best explained by rising temperatures during the vegetation period. An increase in fruit rot caused by Nectria galligena is anticipated when milder and more humid winter months favour canker formation on twigs and branches, thereby increasing inoculum for fruit infections. An increasing importance of Neofabraea alba and Glomerella cingulata and/or G.??acutata as storage rots of apples in Northern Germany cannot be safely correlated with the climate change at present. Research on fungi is currently being expanded at the OVB Jork in order to ensure a faster identification of new pathogens and a more thorough investigation of relevant features of their infection biology.     

The effect of various nitrogen fertilization and foliar nutrition regimes on the concentrations of nitrates,ammonium ions,dry matter and N-total in carrot (Daucus carota L.) roots

Two field experiments (Experiment I in 2003–2005 and Experiment II in 2004–2005) with carrot c.v. ‘Kazan F₁’ were conducted at Trzciana village (50°06′N, 21°85′E). The experiments were arranged in a split-plot design with four replications. Two sub-blocks were identified in both experiments: I, without foliar nutrition; II, receiving plant foliar nutrition. The plants were sprayed three times alternately with: 2% urea solution, 1% solution of multi-component ‘Supervit R’ fertilizer (produced by Intermag, Poland) and again with 2% urea solution. Combinations with diversified nitrogen fertilization were distinguished within both sub-blocks. Experiment I comprised of: (1) Control, (2) Ca(NO₃)₂ 70, (3) Ca(NO₃)₂ 70 + 70, (4) (NH₄)₂SO₄ 70 and (5) (NH₄)₂SO₄ 70 + 70. Experiment II included: (1) Control, (2) ENTEC-26 35 + 35, (3) ENTEC-26 70 + 70, (4) ENTEC 26 105 + 105, (5) NH₄NO₃ 35 + 35, (6) NH₄NO₃ 70 + 70, (7) NH₄NO₃ 105 + 105. Where 70 kg N ha⁻¹ was used before sowing, whereas 35 + 35, 70 + 70 and 105 + 105 kg N ha⁻¹ were applied before sowing and as top dressing. Solid nitrogen fertilizer was added to the soil (produced by): Ca(NO₃)₂, Yara International ASA (Hydro); (NH₄)₂SO₄, Zak?ady Azotowe in Tarnów, Poland; NH₄NO₃, Zak?ady Azotowe in Pu?awy, Poland; and ENTEC-26, COMPO GmbH & Co. KG, Germany. The research aimed at determining the effect of diversified nitrogen fertilization and foliar nutrition on NO₃⁻, NH₄⁺, N-total and dry matter (d.m.) concentrations in carrot, and N uptake by storage roots. In Experiment I, nitrogen fertilization did not affect NO₃⁻ concentration, whereas in Experiment II, the applied N treatment increased NO₃⁻ concentration in carrot in relation to the control, except for the storage roots of plants fertilized with ENTEC-26 35 + 35. Nitrogen fertilization applied in both experiments caused a significant increase in N-total concentration in carrot and N uptake by storage roots in comparison with the control plants. In both experiments, nitrogen fertilization had a different effect on the concentrations of NH₄⁺ and d.m. in carrot. What is more, foliar nutrition treatments in both experiments had a different effect on the concentrations on NO₃⁻, N-total, d.m. in carrot and N uptake by carrot storage roots.     

Drying half of the root-zone from mid fruit growth to maturity in ‘Hass’ avocado (Persea americana Mill.) trees for one season reduced fruit production in two years

We tested the effect of extended drying of half the root system on fruit yield and fruit Ca concentration, an indirect measure of fruit quality, in avocado (Persea americana Mill. cv Hass). In a field experiment on a sandy soil, withholding irrigation and plastic sheeting was used to dry the root-zone beneath the whole canopy (DD) or half the canopy (WD), compared with well-watered trees (WW). The irrigation water contained added nutrients and was slightly saline. Yield, shoot growth, leaf conductance, leaf and fruit water status and mineral concentrations of leaves and fruit were studied. The responses of treated trees were assessed in the following season during which normal irrigation practices were restored. With respect to yield, the WD treatment behaved the same as the DD treatment. It reduced yield by more than half and proportionately more than the reduction in water supply thus reducing irrigation efficiency. Re-watering did not restore yield of WD or DD-trees in the next season. The WD and DD treatments had no effect on the concentration of Ca in the fruit mesocarp and so are unlikely to affect fruit quality. The main impact of reduced water supply on the trees was fruit abscission and this was linked to dry soil around the roots rather than the water status of the leaves or fruits. We conclude that extended drying of half of the root-zone in one season reduced irrigation efficiency for two seasons by promoting the abscission of developing fruit to the same extent as occurred when the whole root system was exposed to extended drying.     

Establishing climate–growth relationships for yelloweye rockfish (Sebastes ruberrimus) in the northeast Pacific using a dendrochronological approach

We applied dendrochronology (tree‐ring) methods to develop multidecadal growth chronologies from the increment widths of yelloweye rockfish (Sebastes ruberrimus) otoliths. Chronologies were developed for the central California coast, a site just north of Vancouver Island, British Columbia, and at Bowie Seamount west of the Queen Charlotte Islands, British Columbia. At each site, synchronous growth patterns were matched among otoliths via the process of cross‐dating, ensuring that the correct calendar year was assigned to all increments. Each time series of growth‐increment measurements was divided by the values predicted by a best‐fit negative exponential function, thereby removing age‐related trends. These detrended time series were averaged into a master chronology for each site, and chronologies were correlated with monthly averages of sea surface temperatures, upwelling, the Northern Oscillation Index, and the Pacific Decadal Oscillation. The two northern growth chronologies positively correlated with indices of warm ocean conditions, especially from the prior summer through the spring of the current year. During the same period, the California chronology positively correlated with indices of cool ocean conditions, indicating an opposing productivity regime for yelloweye rockfish between the California Current and the Gulf of Alaska. Overall, this study demonstrates how tree‐ring techniques can be applied to quickly develop annually resolved chronologies and establish climate–growth relationships across various temporal and spatial scales.