Identification of putative adhesin genes in shigatoxigenic Escherichia coli isolated from different sources

Shiga toxin-producing Escherichia coli (STEC) is an important pathogen responsible for severe human intestinal and systemic infections. The bacterial factors required for colonization of the hosts are still not well defined. In this study, the prevalence of seven putative adhesive genes that are not encoded in the locus of enterocyte effacement (LEE) in 74 STEC strains isolated from humans (n=39), food (n=6), cattle (n=11), and pigs (n=18) was investigated by PCR. In addition, Shiga toxin (stx) and intimin (eaeA including alpha, beta, gamma, delta, epsilon, zeta variants) genes were tested. The most prevalent adhesin was that encoded by toxB gene (52 of 74 isolates; 70.3%). This marker was found in all 12 strains of O157:H7 serotype and in 23 of 32 (71.9%) isolates of the O157:NM serogroup. Moreover, this gene was also present in other 17 STEC of the non-O157 serogroup. The second most prevalent adhesin was that encoded by the lpfAO157/OI-154 gene (43 isolates; 58.1%). This marker was detected in LEE-positive strains of the O157 serogroup but also in 9 LEE-negative isolates of porcine origin. Several STEC isolates tested (42 strains; 56.7%) had the efa1 gene of the Efa1 putative adhesive marker. This adhesin was almost exclusively found among eaeA-positive strains recovered from humans, food and cattle. On the other hand, iha marker was detected either in LEE-positive (29 isolates) or LEE-negative (12 strains) STEC. Only two eaeA-negative strains had the saa putative adhesive gene. These results show that STEC strains may be able to express several putative adhesins. However, further studies are needed to evaluate the role of the genes identified in the present study in the pathogenesis of human infections.     

Consequences of slotting on the pore characteristics of a sandy soil in northeast Thailand

In the sandy soils of northeast Thailand, root development is generally limited to the topsoil (0–20 cm depth) but a simple slotting intervention (20–40 cm) significantly increased the root frequency in the slotted material (E_slot) compared with the undisturbed subsoil (E horizon). The aim of this study was to investigate the consequences of slotting on the soil structure by analysing at different scales the pore characteristics of the original soil profile and of the soil material inside the slot. These characteristics were studied using bulk density measurements, image analysis of thin sections and mercury porosimetry. Our results showed that the total porosity of the E horizon and E_slot material was similar when measured in 100 cm³ cylinders, but that the pore size distribution had been changed by slotting. The unaltered E horizon contained mainly small pores characterized by a narrow distribution related to close packing of the sand grains, associated with some biological macropores probably with poor continuity as they did not contain roots despite their size. On average, pores were larger in the E_slot material, with a broader distribution resulting from looser packing of the sand grains but with fewer biological macropores. Although slotting reduced the number of biological pores, the looser packing appeared to be more favourable to root development than the presence of macropores in the E horizon. Finally, the comparison of the porosity in the different horizons with the porosity of the E_slot material, indicated the significance of the closeness of the sand packing on root development.     

RESPONSE OF ORNAMENTAL SUNFLOWER CULTIVARS ‘SUNBEAM’ AND ‘MOONBRIGHT’ TO IRRIGATION WITH SALINE WASTEWATERS

To explore the possibility that saline wastewaters may be used to grow commercially acceptable floriculture crops, a study was initiated to determine the effects of salinity on two pollen-free cultivars of ornamental sunflower (Helianthus annuus L.). ‘Moonbright’ and ‘Sunbeam’ were grown in greenhouse sand cultures irrigated with waters prepared to simulate wastewaters commonly present in two inland valley regions of California: 1) San Joaquin Valley (SJV) where saline-sodic drainage waters are dominated by sodium (Na⁺) and sulfate (SO ^2? ₄ ) and 2) Coachella Valley (CV) where major ions in tailwaters are Na⁺, chloride (Cl^?), SO ^2? ₄ , magnesium (Mg²⁺), calcium (Ca²⁺), predominating in that order. Ten-day-old seedlings were subjected to five salinity treatments of each water composition, each replicated three times. Electrical conductivities (EC) of the irrigation waters were 2.5, 5, 10, 15, and 20 dS·m^?1. Flowering stems were harvested when about 75% of the ray flowers were nearly horizontal. Stem length and fresh weight, flower and stem diameter were measured. Mineral ion concentrations in upper and lower stems, upper and lower leaves were determined. Sodium was excluded from the young tissues in the upper portions of the shoot and retained in the basal stem tissue. Inasmuch as sunflower is also a strong potassium (K)-accumulator, K⁺/Na⁺ selectivity coefficients were unusually high in the younger shoot organs. Despite a five-fold increase in substrate Ca²⁺ in both solutions, shoot-Ca decreased as salinity increased and this cation was retained in the older leaves. A few of the lower leaves of plants irrigated with ICV waters at EC = 10 dS·m^?1 and higher, exhibited necrotic margins which were undoubtedly caused by high concentrations of Cl^? in the tissues. Flowering stems produced in all treatments met florist quality standards in terms of diameters for stems (0.5 to 1.5 cm) and blooms (8 to 15 cm). Across treatments, stem lengths ranged from 60 to 175 cm. Both ornamental sunflower cultivars proved to be good candidates for production of marketable flowering stems using moderately saline wastewaters.     

Fish larvae dynamics in temperate estuaries: A review on processes,patterns and factors that determine recruitment

Early life stages of fish (eggs and larvae) are particularly vulnerable with mortality rates of up to 99% recorded for a large number of species. High mortality rates result from the limited swimming ability of larvae preventing them from escaping sub-optimal environmental conditions, predators or low prey density areas. In this context, estuaries are key nursery areas for larval and juvenile fish. Estuarine habitats offer environmental conditions favourable to the survival and growth of early stages, through abundant good-quality prey and protection from predators. A vast literature on larvae occurring in temperate estuaries exists, but an overall perspective is lacking. The occurrence of fish larvae in temperate estuaries depends on several factors. First, the choice of spawning time and location is primordial, as they have evolved to optimise the entry and the retention of larvae in the estuary as well as the conditions experienced by young stages. Secondly, larval growth and survival depend on key environmental factors (e.g. salinity, water temperature, freshwater inputs, turbidity and dissolved oxygen concentration). Knowledge of the larval dynamics in temperate estuaries is scarce for some topics and biased towards some species or geographical areas. The main goal of the present literature review is to synthesise existing knowledge regarding spawning timing and location and larval ecology for fish species occurring in coasts and estuaries, identifying the main patterns, consensus or conflicting hypotheses and highlighting major gaps. Research needs and future perspectives were outlined.     

Central Nervous System Infection Associated With Anaerobic Bacteria in Two Dogs and Two Cats

Central nervous system (CNS) infection caused by anaerobic bacteria (including Bacteroides, Fusobacterium, Peptostreptococcus, and Eubacterium) was diagnosed in two dogs and two cats. In one dog there was extensive meningomyeloencephalitis, presumably the result of hematogenous spread of bacteria from lung abscesses and bacterial endocarditis. Subdural empyema of unknown origin was found in a second dog and two cats. Clinical signs in all four animals included mental depression and focal neurologic deficits, without fever.     

Comparison of Two Doses of the GnRH Antagonist, Acyline, for Pregnancy Termination in Bitches

Gonadotropin-releasing hormone (GnRH) antagonists are particularly useful when a rapid inhibitory effect on the gonadal axis is required. The aim of this study was to test the efficacy and clinical safety of a low and high dose of the third generation GnRH antagonist, acyline, on pregnancy termination in female dogs. The effect of the antagonist on the progesterone (P₄) serum concentration was also described. Twenty-one mid-pregnant bitches were randomly assigned to a single subcutaneous (SC) dose of a placebo (PLACE; n = 7), a low (ACY-L; 110 μg/kg; n = 6) or high (ACY-H; 330 μg/kg; n = 8) dose of acyline. The animals were followed up for 15 days. All ACY treated but no placebo-treated animals terminated their pregnancy by abortion (p < 0.01). The ACY-L and ACY-H groups interrupted their pregnancy 7 ± 1.9 and 6.4 ± 1.3   days after treatment, respectively (p = 0.7). A significant interaction between treatment and day was found (p < 0.01) for P₄ serum concentrations when PLACE was compared with both ACY groups. No difference was found for this hormone between both ACY groups (p > 0.05) where P₄ diminished throughout the study. The decreasing rate varied among animals and was closely related to the time of abortion when P₄ reached basal concentrations. In PLACE animals, gestation progressed normally and P₄ did not change throughout the study (p > 0.05). None of the bitches presented side effects. It was concluded that acyline safely terminated mid-pregnancy by permanently decreasing P₄ serum concentrations.