Cytological mechanisms of 2n pollen formation in the wild potato Solanum okadae and pollen-pistil relations with the cultivated potato, Solanum tuberosum

Solanum okadae Hawkes et Hjert is a wild diploid potato species endemic to Argentina and Bolivia, of potential breeding value. However, no genetic studies have been carried out with this species and its crossability relations with the common tetraploid potato, S. tuberosum L. ssp. tuberosum, are unknown. Furthermore, accessions from both countries differed in their morphological phenotypes. To ascertain the feasibility of incorporating this wild germplasm into cultivated potato, 2n pollen screening was carried out in 10 accessions and families derived from crosses between accessions; also, pollen-pistil compatibility relations were studied in reciprocal interspecific crosses. Plants of four of the 10 accessions produced 2n pollen (0.1 to 5.0%) and 4n pollen (0.0 to 3.0%). Parallel and tripolar spindles at Anaphase II were the cytological mechanisms involved in 2n pollen formation; lack of chromosome migration in both meiotic divisions originated the 4n pollen. Both full compatibility and incompatibility at various sites along the pistil were observed in the S. tuberosum × S. okadae combinations; most reciprocal combinations were incompatible. Compatible genotypes produced 2n pollen. However, only a few seeds were obtained and chromosome counts could not be carried out in the hybrid progeny because seedlings died at an early stage. The pollen-pistil barriers are incomplete and can be circumvented by the appropiate choice of parents. The identification of the post-zygotic barriers will be the focus of further studies.     

Nitrogen fixation by nodulated soybean under tropical field conditions estimated by the 15N isotope dilution technique

The contribution of biological N₂ fixation to the N nutrition of nodulated soybean was estimated using the ¹⁵N isotope dilution technique and a non-nodulating soybean isoline as a non-fixing control plant. The plants were grown in the field in concrete cylinders (60 cm dia) and harvested at seven stages of plant growth. Labelled N was added to the soil either as labelled organic matter before planting or in seven small additions (2kg N ha^?1) of (NH₄)₂SO₄ during the growing period.There was good agreement between isotope dilution estimates of nitrogen fixation for the two labelling methods. Acetylene reduction assays on intact root systems greatly underestimated N₂ fixing activity. The difference in total N between nodulated and non-nodulated plants generally gave higher estimates compared with the isotope technique. The data indicate that this was because nodulated plants recovered more N from the soil than the non-nodulated plants. After 92 days of growth, the soybean derived approximately 250kg N ha^?1 from biological N₂ fixation.     

Spatial analysis reveals differences in soil microbial community interactions between adjacent coniferous forest and clearcut ecosystems

Knowledge of how forest management influences soil microbial community interactions is necessary for complete understanding of forest ecology. In this study, soil microbial communities, vegetation characteristics and soil physical and chemical properties were examined across a rectangular 4.57 × 36.58 m sample grid spanning adjacent coniferous forest and clearcut areas. Based on analysis of soil extracted phospholipid fatty acids, total microbial biomass, fungi and Gram-negative bacteria were found to be significantly reduced in soil of the clearcut area relative to the forest. Concurrent with changes in microbial communities, soil macroaggregate stability was reduced in the clearcut area, while no significant differences in soil pH and organic matter content were found. Variography indicated that the range at which spatial autocorrelation between samples was evident (patch size) was greater for all microbial groups analyzed in the clearcut area. Overall, less spatial structure could be resolved in the forest. Variance decomposition using principal coordinates of neighbor matrices spatial variables indicated that soil aggregate stability and vegetation characteristics accounted for significant microbial community spatial variation in analyses that included the entire plot. When clearcut and forest areas were analyzed separately, different environmental variables (pH in the forest area and soil organic matter in the clearcut) were found to account for variation in soil microbial communities, but little of this variation could be ascribed to spatial interactions. Most microbial variation explained by different components of microbial communities occurred at spatial scales other than those analyzed. Fungi accounted for over 50% of the variation in bacteria of the forest area but less than 11% in the clearcut. Conversely, AMF accounted for significant variation in clearcut area, but not forest, bacteria. These results indicate broadly disparate controls on soil microbial community composition in the two systems. We present multiple lines of evidence pointing toward shifts in fungi functional groups as a salient mechanism responsible for qualitative, quantitative and spatial distribution differences in soil microbial communities.     

Approaches to calculating P balance at the field‐scale in Europe

Policies for mitigating phosphorus (P) loss from agriculture are being developed in a number of European countries and calculation of P balance at farm‐gate or field‐scale is likely to be a part of such policies. The aim of the paper was to study P balance at the field‐scale in 18 countries that participated in the European Union's (EU) European Co‐operation in the Field of Scientific and Technical Research (COST) action on “Quantifying the Agricultural Contribution to Eutrophication (COST 832)”. A questionnaire related to P balance at the field‐scale was sent to representatives in the 18 countries and all replied. The field as a unit is defined differently in the various European agricultural systems. The identification of the inputs and outputs differ among the countries. For example, P losses may or may not be taken into account in balances. Phosphorus balance at the field‐scale is used in all countries in the context of soil analysis and P recommendations for crops and advisory and research purposes, while only a few countries use it for policy purposes (agri‐environmental). There is wide variation in P balances between countries in relation to soil fertility and vulnerability of water to eutrophication from nutrients from agricultural sources. In several eastern European countries, Hungary for example, fertilizer P use has dropped to about one tenth of the levels used in the 1980's. Many of these countries now have a negative P balance. In western European countries, by contrast, although fertilizer P use has decreased in recent years, the average input is higher than the average off take, and soil test phosphorus (STP) values remains high and continue to increase in some areas. Twelve different soil extractants for STP are used in Europe, and their interpretation can hinder direct comparisons. Calculating P balance at the field‐scale involves approximations in estimating inputs and outputs and spatial variations in fertility in individual fields. Accuracy of data and standardization of methods for calculating balances with inputs and outputs will be a challenge for the future development of a sustainable agriculture in Europe.     

Soil photolysis in a moisture- and temperature-controlled environment. 2. Insecticides

The photolytic degradations of imidacloprid, carbofuran, diazinon, chlorpyrifos, pyridaben, propoxur, and esfenvalerate were independently compared in both moist (75% field moisture capacity at 0.33 bar) and air-dry microbially viable soils at 5 microg/g. All compounds were applied to sandy soil except for propoxur, which was applied to sandy loam soil. Diazinon was applied to both sandy soil and sandy loam soil. The samples were exposed for up to 360 h, depending on the half-life of the compound. Moisture and temperature were maintained through the use of a specially designed soil photolysis apparatus. Corresponding dark control studies were performed concurrently. With the exception of esfenvalerate, the other compounds exhibited significantly shorter half-lives in moist soils, attributed to the increased hydrolysis and microbial activity of the moist soil. The esfenvalerate metabolism was not first order due to limited mobility in the soil because of its very low water solubility. The overall half-life for esfenvalerate was 740 h, as the percent remaining did not drop below 60%. The imidacloprid half-life in irradiated moist soil was 1.8 times shorter than in air-dry soils. However, on dry soil the photodegradation showed poor first-order kinetics after 24 h of exposure. The metabolism of carbofuran and diazinon was highly dependent on soil moisture. Carbofuran exhibited 2.2 times longer half-lives when less moisture was available in the soil. Diazinon in moist sandy soil degraded rapidly, but slowed significantly in irradiated and dark control air-dry sandy soil. Diazinon photolysis on sandy loam soil was not first order, as it attained a constant concentration of 54.9%, attributed to decreased mobility in this soil. Chlorpyrifos photolysis was 30% shorter on moist sand than on air-dry sand. Pyridaben photolyzed rapidly throughout the first 72 h of irradiation but maintained 48% through 168 h. Propoxur metabolism in moist sandy loam soil was not first order and did not degrade below 50% after 360 h of exposure, but the overall half-life was still nearly half of that on irradiated air-dry soil. Three of the compounds showed differences in metabolism patterns during exposure on moist or air-dry soil. Typically, the moist soils produced a more linear decline than that seen in the dry soils, corresponding to the susceptibility of the particular chemical to hydrolysis and/or biodegradation. Four of the eight experiments had shorter half-lives in dark control moist soils than in irradiated dry soils.     

Population structure and genetic differentiation among the USDA common bean (Phaseolus vulgaris L.) core collection

Genetic diversity data were collected from a large population of common bean (Phaseolus vulgaris L.) landraces representing the United States Department of Agriculture core collection. The data were based on microsatellite data from all linkage groups. A procedure was developed to determine if we collected sufficient marker data to adequately estimated pairwise diversity. The diversity data were used to define populations using distance and model-based approaches. Genetic differentiation and genetic isolation by distance data were collected. Diversity was also compared for markers linked and unlinked to domestication loci. Using a model-based approach, the landraces were divided into the traditional Middle American and Andean gene pools. Diversity was greater for the Middle American gene pool. Six Middle American and three Andean subpopulations were defined, and the Middle American subpopulations exhibited strong geographic identity. Unlike other studies, seed size varied considerably with subpopulations, and a number of the subpopulations contained landraces from multiple common bean races. All of the subpopulations were highly differentiated, with the Middle American subpopulations showing the greatest differentiation. Genetic isolation by distance was observed among the Middle American and Andean subpopulations but not among subpopulations within a gene pool. Within each gene pool, diversity was lower for markers linked to domestication loci.     

Effect of soil moisture and sample depth on pesticide photolysis

The effects of soil depth and moisture on pesticide photolysis were studied. Moist soil at depths of 3, 2.5, 2, 1.5, 1, and 0.5 mm were each dosed at 2.5 microg/g with (14)C-niclosamide and photolyzed under a xenon lamp at constant temperature. Samples were removed after 20, 40, 110, and 153 h of continuous irradiation. The decrease in percent of niclosamide and the appearance of degradates were followed by analyzing the soil extracts by HPLC. A corresponding set of experiments used air-dried soil. An experiment was also performed using initially moist soil which was permitted to dry during photolysis but returned to moist conditions at each sampling. Qualitative and quantitative differences were found in the rate and route of degradation of niclosamide under these conditions. These differences have resulted from a combination of reduced photochemical activity and microbial population in dry soil. The half-lives of niclosamide in the dry soils were 2 to 5 times longer than those in the moisture-maintained soil. There was also a noticeable difference in the half-lives in soil of different depths. Moisture-maintained soil showed a uniform linear increase in half-life from 95 to 195 h as soil depth increased from 0.5 mm to 3.0 mm. With air-dried soil the half-lives were greatly dependent on soil depth, showing a much broader range of 199 h at 0.5-mm to 1064 h in 3.0-mm soil. An experimental design is described which maintains soil temperature and moisture to preset conditions.