Hepatoprotective and TNF-α inhibitory activity of Zosima absinthifolia extracts and coumarins

Zosima absinthifolia (ZA) extracts and the coumarins (+)-columbianadin and (-)-deltoin were evaluated for their potential hepatoprotective and antiinflamatory effects in a CCl(4)-induced hepatotoxicity assay in rats and by the inhibition of TNF-α production on LPS-stimulated THP-1 macrophages, respectively. Both the ZA extracts and the coumarins showed hepatoprotective activity confirmed by monitoring the ALT/AST levels and by histopathological examination. The antiinflamatory activity, proved by the inhibition of TNF-α production, was found to be higher for the n-hexane root extract than for coumarins, suggesting synergic potential of the extract. The concentration of (-)-deltoin and (+)-columbianadin in extracts was determined by HPLC analysis.     

Flash chromatography on cartridges for the separation of plant extracts: Rules for the selection of chromatographic conditions and comparison with medium pressure liquid chromatography

Empirical rules for the selection of chromatographic conditions on flash chromatography cartridges were developed, with an emphasis on gradient mode. These rules were then tested with separation of extracts from important medicinal plants including Curcuma xanthorrhiza, Piper nigrum and Salvia milthiorrhiza. Sepacore® cartridges enabled a good separation of compounds with a broad range of polarity, as typically found in plant extracts. The chromatographic resolution remained, however, lower than that achieved on classical columns packed with material of smaller particle size. For poorly soluble extracts, solid introduction gave better results than liquid injection.     

Threshold responses of songbirds to long-term timber management on an active industrial forest

Forest managers often seek to balance economic benefits from timber harvesting with maintenance of habitat for wildlife, ecosystem function, and human uses. Most research on the relationship between avian abundance and active timber management has been short-term, lasting one to two years, creating the need to investigate long-term avian responses and to identify harvest thresholds when a small change in habitat results in a disproportionate response in relative abundance and nest success. Our objectives were to identify trends in relative abundance and nest success and to identify landscape-scale disturbance thresholds for avian species and habitat guilds in response to a variety of harvest treatments (clear-cuts, heavy and light partial harvests) over 14 years. We conducted point counts and monitored nests at an industrial forest in the central Appalachians of West Virginia during 1996-1998, 2001-2003, and 2007-2009. Early successional species increased in relative abundance across all three time periods, whereas interior-edge and forest-interior guilds peaked in relative abundance mid-study after which the forest-interior guild declined. Of 41 species with >10 detections, four (10%) declined significantly, 13 (32%) increased significantly (only three species among all periods), and 9 (22%) peaked in abundance mid-study (over the entire study period, four species had no significant change in abundance, four declined, and one increased). Based on piecewise linear models, forest-interior and interior-edge guilds’ relative abundance harvest thresholds were 28% total harvests (all harvests combined), 10% clear-cut harvests, and 18% light partial harvests, after which abundances declined. Harvest thresholds for the early successional guild were 42% total harvests, 11% clear-cut harvest, and 10% light partial harvests, and relative abundances increased after surpassing thresholds albeit at a reduced rate of increase after the clear-cut threshold. Threshold confidence intervals for individual species overlapped their guild threshold intervals 91% of the time. Even though relative abundance of most species (80%) did not decline as the area affected by timber management increased, implementing management at or below our approximate forest-interior and interior-edge harvest thresholds would reduce the number of declining species by half, maintain higher relative abundances of four species with a net decline in abundance but that peaked in abundance mid-study, and maintain higher relative abundances of ten additional species. In contrast, this management strategy also would prevent the increase in relative abundance of seven species and limit the increase in abundance of three species that increased throughout the study.     

Trade-off between height growth and spring flushing in common beech (<Emphasis Type="Italic">Fagus sylvatica</Emphasis> L.)

• Introduction   

The annual development cycle of boreal and temperate trees results from an evolutionary trade-off between two opposing forces. These are namely, the adjustment of leaf phenology to the timing of frost occurrence at the beginning and/or the end of the growth season countered by an effective adjustment to the duration of the growth season to maximise photosynthesis and biomass production during the growing season.     

Growth,P uptake and rhizosphere properties of wheat and canola genotypes in an alkaline soil with low P availability

The aim of the present study was to assess the role of soil type on growth, P uptake and rhizosphere properties of wheat and canola genotypes in an alkaline soil with low P availability. Two wheat (Goldmark and Janz) and two canola genotypes (Drum and Outback) were grown in a calcareous soil (pH 8.5) at two P levels [no P addition (0P) or addition of 200 mg kg⁻¹ P as Ca₃(PO₄)₂ (200P)] and harvested at flowering or maturity. Shoot and root dry weight, root length and shoot P content were greater in the two canola genotypes than in wheat. There were no consistent differences in available P, microbial P and phosphatase activity in the rhizosphere of the different genotypes. Shoot P content was significantly positively correlated with root length, pH and phosphatase activity in the rhizosphere. The microbial community composition, assessed by fatty acid methylester analysis, of the canola genotypes differed strongly from that of the wheat genotypes. The weight percentage bacterial fatty acids, the bacteria/fungi (b/f) ratio and the diversity of fatty acids were greater in the rhizosphere of the canolas than in the rhizosphere of the wheat genotypes. In contrast to the earlier studies in an acidic soil, only small differences in growth and P uptake between the genotypes of one crop were detected in the alkaline soil used here. The results confirmed the importance of root length for P uptake in soils with low P availability and suggest that the rhizosphere microbial community composition may play a role in the better growth of the canola compared to the wheat genotypes.     

New Wild Lactuca Genetic Resources with Resistance Against Bremia lactucae

A total of 1027 genotypes of wild Lactuca spp. (L. serriola, L. saligna, and L. aculeata), originating from Israel, Jordan, East Turkey, Armenia, Kazakhstan, China, and various other countries in Europe were screened for resistance to the lettuce downy mildew (Bremia lactucae Regel). The genotypes of L. serriola (N = 962); L. saligna (N = 43); and L. aculeata (N = 22) were tested at the seedling stage with two isolates of B. lactucae (race Bl-21 and Isr-74) isolated from cultivated lettuce in Italy and Israel, respectively. Altogether, the isolates possess virulence against 17 out of 20 Dm genes/R-factors composing the established differential set of lettuce lines/varieties. They could therefore be used for preliminary detection of the presence of new resistance factors. A total of 83 and three genotypes of L. serriola and L. saligna, respectively, were resistant to infection by each of the two isolates alone as well as to the infection by a mix of the two isolates. These genotypes probably carry previously unknown resistance, and therefore could be suitable for exploitation by breeders and further detailed research. The wild progenitor of lettuce, L. serriola, and related species harbor significant untapped genetic resources for lettuce improvement.     

Three-component model of runoff generation,Lysina catchment,Czech Republic

The forested Lysina catchment is situated in an area very susceptible to acid deposition. The stream water is characterized by extremely high concentrations of total dissolved Al (volume weighted mean 66 Μmol L^?1) and H⁺ (average pH=3.87). In a simple two-component model, the surface runoff component contributes only 6% of runoff in winter and 4% of runoff in summer. During flood episodes, the direct runoff contributes up to 20% of streamflow. There is a strong positive correlation between stream acidity and stream discharge. The observed exponential increase in streamwater acidity with discharge during high flow periods cannot be explained by the simple two-component model. A three-component model used for hydrograph separation is based on chemical and¹⁸O analysis of precipitation, soil water and runoff. It incorporates a soil water component along with groundwater and rainfall components in streamwater generation. Dissociated organic acids leached during the flow of water through the uppermost soil horizon help to balance an apparent anion deficit. The apparent anion deficit was found to increase exponentially with flow rate. Low variability in streamwaterδ ¹⁸O corresponds to a high contribution of indirect components (i.e., soil and ground water) in the runoff. The soil water contribution to indirect runoff calculated from the apparent anion deficit of streamwater, varied from 0 at base flow up to 80% during floods. On average, 40% of the streamwater is derived from soil water (from 31 to 39% in winter and from 47 to 54% in summer).     

An integrated hydro-economic modelling framework to evaluate water allocation strategies II: Scenario assessment

In this paper the results of an assessment of the hydrological and economic implications of reallocating water in the Musi sub-basin, a catchment within the Krishna Basin in India, are reported. Policy makers identified a number of different but plausible scenarios that could apply in the sub-basin, involving; supplying additional urban demand from agricultural allocations of water, implementing a number of demand management strategies, changing the timing of releases for hydropower generation, changing the crops grown under irrigation, reducing existing stream flows and allowing for more environmental flows. The framework chosen to undertake this assessment was a simulation model that measures and compares the economic values of water allocation scenarios determined from a water allocation model that accounts for supplies of groundwater and surface water across a number of regions and over a variety of uses. Policy makers are provided with the range of measures on the security of the supply of water and the social costs and benefits of reallocating water between sectors and across regions within the sub-basin. Taking water from agriculture to supply urban users has a greater impact on irrigation supplies during dry years. It was also found that changing the allocation of water between sectors, by taking it away from agriculture had a large positive economic impact on the urban sector. Yet the costs involved in undertaking such a strategy results in a significant loss in the net present value of the scheme. Stream flow reductions, if significantly large (at around 20%), were found to have a large physical and economic impact on the agricultural sector. Implementing water saving strategies in Hyderabad was found to be more cost effective than taking water from agriculture, if rainwater tanks are used to achieve this. Changing the timing of hydropower flows resulted in best meeting of irrigation demand in NSLC and NSRC. Under this scenario, the crops grown under irrigation were found to have a significant economic impact on the sub-basin, but not as large as farmers undertaking crop diversification strategies, ones which result in farmers growing less rice. The security of supplying water to different agricultural zones has significantly improved under this scenario. Finally, releasing water for environmental purposes was found to have only a minor impact on the agricultural sector.     

Ceramide triggers budding of exosome vesicles into multivesicular endosomes

Intraluminal vesicles of multivesicular endosomes are either sorted for cargo degradation into lysosomes or secreted as exosomes into the extracellular milieu. The mechanisms underlying the sorting of membrane into the different populations of intraluminal vesicles are unknown. Here, we find that cargo is segregated into distinct subdomains on the endosomal membrane and that the transfer of exosome-associated domains into the lumen of the endosome did not depend on the function of the ESCRT (endosomal sorting complex required for transport) machinery, but required the sphingolipid ceramide. Purified exosomes were enriched in ceramide, and the release of exosomes was reduced after the inhibition of neutral sphingomyelinases. These results establish a pathway in intraendosomal membrane transport and exosome formation.     

Bottom-up synthetic biology: engineering in a tinkerer's world

How synthetic can "synthetic biology" be? A literal interpretation of the name of this new life science discipline invokes expectations of the systematic construction of biological systems with cells being built module by module--from the bottom up. But can this possibly be achieved, taking into account the enormous complexity and redundancy of living systems, which distinguish them quite remarkably from design features that characterize human inventions? There are several recent developments in biology, in tight conjunction with quantitative disciplines, that may bring this literal perspective into the realm of the possible. However, such bottom-up engineering requires tools that were originally designed by nature's greatest tinkerer: evolution.