Stability in reproductive timing and habitat usage of Chinook salmon across six years of varying environmental conditions and abundance

The spatial and temporal distribution of spawning activity by autumn‐run Chinook salmon Oncorhynchus tshawytscha (Walbaum) was examined across multiple years. The study period included two years of extreme drought conditions when water temperatures in the spawning reach of the Stanislaus River were considered sub‐optimal for spawning and egg incubation. Despite varying levels of superimposition, redd counts and densities remained stable and positively associated with river location, indicating that superimposition may be driven by habitat preference rather than the absence of suitable spawning locations. Spawning occurred slightly later during drought years (6–10 days later compared with wetter years). This delay was attributable to deferred migration instead of deferred spawning, and the majority of redds were constructed at water temperatures exceeding the optimal temperature range. As a consequence, estimates of juvenile production during 2014 and 2015 were among the lowest on record. These findings may be related in part to the high hatchery contribution to the population, above‐average temperatures during spawning and incubation, and superimposition rates. Management recommendations include adequate cold‐water storage in the upstream reservoir, refined spawning habitat restoration techniques in the light of superimposition rates and, on a broader system scale, actions that reduce the amount of stray hatchery Chinook salmon.     

Pacific herring, Clupea pallasi, recruitment in the Bering Sea and north-east Pacific Ocean, II: relationships to environmental variables and implications for forecasting

Previous studies have shown that Pacific herring populations in the Bering Sea and north-east Pacific Ocean can be grouped based on similar recruitment time series. The scale of these groups suggests large-scale influence on recruitment fluctuations from the environment. Recruitment time series from 14 populations were analysed to determine links to various environmental variables and to develop recruitment forecasting models using a Ricker-type environmentally dependent spawner–recruit model. The environmental variables used for this investigation included monthly time series of the following: southern oscillation index, North Pacific pressure index, sea surface temperatures, air temperatures, coastal upwelling indices, Bering Sea wind, Bering Sea ice cover, and Bering Sea bottom temperatures. Exploratory correlation analysis was used for focusing the time period examined for each environmental variable. Candidate models for forecasting herring recruitment were selected by the ordinary and recent cross-validation prediction errors. Results indicated that forecasting models using air and sea surface temperature data lagged to the year of spawning generally produced the best forecasting models. Multiple environmental variables showed marked improvements in prediction over single-environmental-variable models.     

Integrating in situ quantitative geographic information tools and size‐specific,laboratory‐based growth zones in a dynamic river‐mouth estuary

• 1. The ultimate determination of coastal habitat suitability requires the integration of both dynamic (i.e. water mass characteristics) and stationary (structural) habitats. An approach using real‐time streamed data collection, remote sensing, and GIS modelling to compare and contrast seasonal and spatial patterns in these habitat components of the eastern and western distributaries of the lower Pascagoula River estuary is described.
• 2. Structural and dynamic habitat characteristics are described using GIS and integrated with published growth data on juvenile mullet (Mugil spp.) and spot (Leiostomus xanthurus) to reveal zones of accelerated growth. Both mullet and spot had their greatest growth when water temperature and salinity (dynamic habitat) were physiologically optimal. The lack of spatial difference in the dynamic habitat between distributaries resulted in no growth zone differences for both species.
• 3. The integration of the growth zones with the structural habitat component showed that the west distributary, with its greater availability and reduced fragmentation of main channel marsh edge, should provide a greater area of essential fish habitat than the east distributary for juvenile spot, a marsh‐edge associate. Because juvenile mullet are less associated with structural wetland habitat, growth zones and the stationary (structural) habitat were not integrated.
• 4. The approach of integrating real‐time geo‐referenced water quality data with regional fish growth‐rate data is an important step towards a quantitative understanding of the hierarchical nature and inherent variability of dynamic coastal environments. The use of this holistic approach should lead to more effective management of estuarine systems, especially in regard to potential impacts within the estuary's watershed and to its coupling with offshore environments.

Copyright © 2007 John Wiley & Sons, Ltd.     

Effects of mountaintop mining on fish distributions in central Appalachia

Mountaintop mining with valley fills (MTM/VF) is the main source of landscape change in central Appalachia. While our knowledge of the local‐scale effects of MTM/VF on stream chemistry and biotic assemblages has recently improved, the effects at the landscape scale are less well known. In this study, we explore the effects of MTM/VF on the distributions of six fish species with contrasting ecologies in the upper Kentucky River basin, an area heavily affected by MTM/VF. Using a museum‐based data set of 239 occurrence records, land use/land cover data and boosted regression tree modelling, we were able to create robust predictive models for the focal species (AUCs = 0.82–0.93). Models explained from 41.2 to 71.9% of the variation in species distributions. We detected a marked negative influence of MTM/VF in four of the six species distribution models – with relative influences ranging from 5.9–12.7%. Species typically inhabiting faster‐flowing riffle and run mesohabitats appeared to respond more strongly to MTM/VF. Interestingly, the mean patch size of MTM/VF was more influential than the overall proportion of the watershed affected by MTM/VF in our models. Thus, our data suggest the spatial pattern of mining disturbance is very important in determining the cumulative impact of MTM/VF. Considering the central Appalachian region is a continental hot spot for freshwater biodiversity, establishing a firm understanding of the effects of MTM/VF at the landscape scale is essential if we wish to protect these natural resources.     

Bioencapsulation of erythromycin using adult brine shrimp, Artemia franciscana (Latreille)

Live adult brine shrimp, Artemia franciscana (Latreille), were enriched with erythromycin to determine if Artemia could accumulate therapeutic levels for subsequent feeding to young fish. Three trials were conducted to determine the erythromycin incorporation and survival rates of enriched Artemia when fed either liposomes containing erythromycin or various erythromycin suspensions. Erythromycin concentration in Artemia fed a liposome suspension was low (∼ 5 μg mL⁻¹) relative to Artemia fed the direct suspension (> 100 μg mL⁻¹) over the same time period. When enriched with suspensions up to 1 g erythromycin L⁻¹ sea water for 14 h, Artemia survival was not significantly affected ( P > 0.05) relative to controls. Using a suspension of 1 g L⁻¹, tissue erythromycin concentrations of 109 ± 16 μg erythromycin mL⁻¹  Artemia homogenate (mean ± SEM) were achieved after 12 h. Concentrations above 170 μg mL⁻¹ were obtained using suspensions of 2–5 g L⁻¹, but Artemia survival significantly ( P < 0.05) decreased.     

Effects of an Enterococcus faecium‐based probiotic on growth performance and health of Pirarucu,Arapaima gigas

Intensive fish farming has resulted in an increased concern for disease outbreaks. Probiotic use is one of the strategies being developed to improve fish health and productivity. Measures of probiotic colonization, growth performance, haematological characteristics and parasite load were used to evaluate the effect of diets supplemented with Enterococcus faecium on growth and health of Arapaima gigas juveniles. A completely randomized design with four treatments (diet with E. faecium at 1 × 10⁶ CFU/g and 1 × 10⁸ CFU/g, control diet and diet with the culture medium MRS) and three replicates was used. Ninety‐six Arapaima juveniles were distributed in 12 cages fed with the specified diet for 68 days. Colonization of the intestinal tract by lactic acid bacteria reduced the total number of heterotrophic bacteria in fish fed with probiotics compared to controls. Fish fed a supplemented diet containing 1 × 10⁸ CFU/g presented higher values of weight gain, survival and fish growth uniformity, and lower values of feed conversion ratio. The prevalence of Trichodina sp. could have affected the survival of fish in the control group. Reduction in parasite load and an increase in haematocrit, the number of erythrocytes, thrombocytes, neutrophils and monocytes were also observed in fish fed the diet containing 1 × 10⁸ CFU/g. Enterococcus faecium presented a probiotic effect in A. gigas juveniles and can be recommended for use at a concentration of 1 × 10⁸ CFU/g to modify the gut microbiota, improve growth performance and haematology and reduce parasitic load.     

Evaluation of the feed value of a transgenic strain of the narrow‐leaf lupin (Lupinus angustifolius) in the diet of the marine fish,Pagrus auratus

This study assessed the nutritional and biological value of a noncommercial, transgenic line of the Australian sweet lupin, Lupinus angustifolius, (cv. Warrah), produced to increase the methionine content of the seed. An initial experiment demonstrated that differences in the methionine content of the transgenic and nontransgenic control lupins had no apparent influence on the growth of juvenile red seabream fed practical diets. Re‐evaluation of the nutritional characteristics of the lupin meals with subsequent digestibility studies allowed the determination of the digestible value of the protein and energy content of each of the varieties. The digestible protein content of either variety was similar, however significant differences in the digestible energy value of each variety existed (56.3% cf. 64.0%). This re‐evaluation of the nutritional value of the genetically manipulated (GM) and non‐GM lupin varieties enabled the reformulation of diets on a digestible protein and energy basis. A second growth trial was undertaken using sub‐satietal pair‐feeding regimes, with the experiment also involving protein‐restrictive diets to allow expression of the differences in the methionine content of the transgenic and nontransgenic lupin meals. A significant benefit of the enhanced methionine level in the transgenic lupin was observed. It is argued that in the high‐protein fish diets used, the importance of amino acid composition is relatively limited. Economic modelling of the potential value of the increased methionine in the transgenic lupin suggests that this will have limited benefit for aquaculture industries, and that greater value would be attributable to higher protein and energy levels in ingredients.     

Azotobacter cysts: reactivation by white light after inactivation by ultraviolet radiation

Cysts of Azotobacter vinelandii 12837 inactivated by ultraviolet radiation can be reactivated by white light. This photoreactivation mechanism is not seen in the vegetative cells of the same organism.     

Long-term successful outcome of a Streptococcus equi subspecies equi brain abscess

We previously described successful treatment, including surgical drainage, of a Streptococcus equi subspecies equi brain abscess that caused severe neurological deficits in a 7-year-old Quarter Horse mare. This report details the long-term successful outcome of the case, findings of a magnetic resonance imaging (MRI) study performed 14 years after surgery and necropsy findings 18 years after initial treatment. Despite persistent cerebral and midbrain lesions detected by MRI and at necropsy, the mare returned to serviceable function within a year of initial treatment and had a successful performance career for over 10 years until carpal arthritis prompted retirement. This case demonstrates that brain abscess in horses can be successfully managed by combined medical and surgical treatment.