Large-scale experiment shows that nylon leaders reduce shark bycatch and benefit pelagic longline fishers

We assess the performance of wire leaders, which some jurisdictions have banned to reduce shark mortality from pelagic longline fishing. Experiments were conducted off northeastern Australia on commercial vessels that deployed equal numbers of wire and nylon monofilament leaders randomly along their longlines. Catch rates of several species, including sharks, were lower on nylon than on wire leaders, probably because those animals often escape by biting through the nylon leaders. High bite-off rates indicate that as many animals escape from nylon leaders as are caught on nylon leaders. The fate of escaped animals is not known, although large sharks are more likely to survive than are small animals. By contrast, catch rates of valuable bigeye tuna (Thunnus obesus) were higher on nylon than on wire leaders. Bigeye tuna are probably able to see wire leaders and avoid those hooks. The financial benefits of increased bigeye tuna catches outweigh the costs associated with banning wire leaders, such as increased rates of gear loss. Thus, banning wire leaders is an effective way of reducing shark catches that fishers should be keen to adopt.     

Variability in the composition of lupin (Lupinus angustifolius) meals influences their digestible nutrient and energy value when fed to rainbow trout (Oncorhynchus mykiss)

Over a series of seven separate experiments 76 different lupin (Lupinus angustifolius) meals were assessed for their digestible dry matter, protein, amino acid and energy characteristics when fed to rainbow trout. Two reference diets (a common basal diet and a reference lupin meal) were also included in each experiment. Minimal variance in the digestibility parameters of both reference diets was observed among the experiments ensuring that there was a high degree of robustness in the across-experiment evaluations. Using simple and multiple-regression techniques, principal diet and ingredient composition factors affecting diet and ingredient digestibilities and ingredient digestible values were explored within the dataset. Using simple linear regression, it was shown that nitrogen digestibility of the lupin meals was negatively influenced by ingredient lignin content, but positively affected ingredient protein (N × 6.25) content. The energy digestibility of the lupin meals was positively affected by a range of compositional features including protein, sum of amino acids and negatively affected by carbohydrate content. The digestible nutrient and energy content of the meals reflected the combined effects of both ingredient digestibilities and ingredient composition. The digestible nitrogen content of the lupin meals was positively affected by protein (N × 6.25), sum of amino acids and energy content, but was negatively affected by lignin and carbohydrate content. The digestible sum of amino acids was also positively affected by protein, sum of amino acids, but only negatively affected by carbohydrate content, not lignin content. The digestible energy content of the lupin meals was also positively affected by protein, sum of amino acids and their own energy density, but only negatively affected by carbohydrate content. Multiple linear regression modelling supported that together ingredient protein and lignin content were the strongest predictors of digestible protein value, explaining close to 60% of the variability in this parameter. Discrete reassessment of these relationships using non-linear analysis methods provided a stronger interpretation of the ingredient composition effects. In recognition of this, a functional model including terms for ingredient protein and lignin content on the digestible protein value was defined. This study demonstrates that within one raw material type that not only does significant variability in the digestible value of the raw materials exist, but that it is possible to identify compositional features of that raw material that are intrinsically influencing their own digestible value.     

Comparing mating designs to restore seed production of interspecific hybrids between Trifolium repens (white clover) and Trifolium uniflorum

Interspecific hybrids between Trifolium uniflorum and cultivated white clover (Trifolium repens) have highly useful characteristics for temperate pastoral systems derived from both parent species. However, the early hybrids (F₁ and BC₁) also have unacceptably poor seed production for commerce. This study analysed the basis for the poor seed production and investigated breeding strategies for overcoming the problem. The BC₁F₁ generation produced lower‐than‐expected numbers of heads per plant and seeds per floret. Backcrossing of selected hybrids to white clover corrected these deficiencies and created new variation. Seed numbers were also returned to near target levels by recurrent selection within the BC₁ generation. Thus, it was possible to retain a theoretical average of 25% of T. uniflorum genome and still achieve high seed production per plant. The BC₁F₂ and BC₂F₁ generations produced high seed numbers per plant, along with reasonable variation. Both of these second‐generation hybrid forms have high reproductive potential and should be the focus for the selection of the desired combinations of agronomic and seed production traits.     

CRISPR-Cas Technology in Plant Science

CRISPR-Cas technology has raised considerable interest among plant scientists, both in basic science and in plant breeding. Presently, the generation of random mutations at a predetermined site of the genome is well mastered, just like the targeted insertion of transgenes, although both remain restricted to species or genotypes amenable for plant transformation. On the other hand, true genome editing, i.e. the deliberate replacement of one or several nucleotides of the genome in a predetermined fashion, is limited to some rather particular examples that generally concern genes allowing positive selection, for example tolerance to herbicides. Therefore, further technological developments are necessary to fully exploit the potential of genome editing in enlarging the gene pool beyond the natural variability available in a given species. In principle, the technology can be applied to any quality related, agronomical or ecological trait, under the condition of upstream knowledge on the genes to be targeted and the precise modifications necessary to improve alleles. Published proof of concepts concern a wide range of agronomical traits, the most frequent being disease resistance, herbicide tolerance and the biochemical composition of harvested products. The regulatory status of the plants obtained by CRISPR-Cas technology raises numerous questions, in particular with regard to the plants that carry in their genomes the punctual modifications caused by the presence of the Cas9 nuclease but not the nuclease itself. Without clarification by the competent authorities, CRISPR-Cas technology would continue to be a powerful tool in functional genomics, but its potential in plant breeding would remain untapped.     

Correction to: Individual based modelling of fish migration in a 2-D river system: model description and case study

Landscape Ecology - In the original publication of the article, the third author name has been misspelt. The correct name is given in this Correction. The original version of this article was revised.     

Identifying climate refugia for 30 Australian rainforest plant species,from the last glacial maximum to 2070

Landscape Ecology - Climate refugia—areas that remain suitable for species during periods of climate disruption—have played an important role in species persistence over time....     

基于电磁阀的喷嘴直接注入式农药喷洒系统

设计了一种喷嘴直接注入式农药喷洒系统。通过与传统喷雾机械比较,简述了喷嘴直接注入式喷雾系统的结构和喷雾执行单元。为了实现农药定量注入,设计一种基于电磁原理的快速响应阀,并论述其工作原理和闭环控制方式。通过试验测试了喷雾执行单元的喷雾特性和喷杆组内各喷雾单元的一致性。结果表明在一定喷洒速率范围内,喷雾执行单元的喷水量和水压强存在多项式关系,农药注入量和PWM信号的高电平时间存在指数关系,其决定系数均高于0.9,并且同一喷杆组内6个喷雾单元的喷雾效果大体一致。     

Response of alluvial fan systems to the late Pleistocene to Holocene climatic transition: contrasts between the margins of pluvial Lakes Lahontan and Mojave, Nevada and California, USA

Dated shorelines of late Pleistocene pluvial Lakes Lahontan (Great Basin Desert, northwest Nevada) and Mojave (Mojave Desert, eastern California) provide timelines for the assessment of alluvial fan sedimentation at the lake margins during the late Pleistocene to early Holocene. Two sets of alluvial fan systems have been mapped: the Stillwater fans, feeding Lake Lahontan; and the Zzyzx fans, feeding Lake Mojave. Their contrasting morphologies suggest different responses of the two fan systems to late Pleistocene to early Holocene climatic change. At the time the Stillwater fan systems underwent minimal sedimentation, with the catchment hillslopes apparently stable. The Zzyzx fans experienced major changes in water and sediment supply from the catchment hillslopes. There was a major phase of hillslope debris-flow activity, followed by fanhead trenching and distal fan progradation. Both areas were wetter and colder in the late Pleistocene than they are today, but during the transition to the Holocene the Zzyzx area was more likely to experience intense rains associated with the monsoonal penetration of warm moist tropical air into the Southwest. Vegetation reconstructions for the late Pleistocene to the early Holocene suggest that catchment hillslopes in the Mojave supported a desert shrub vegetation, but those in the Stillwaters supported juniper woodland and grasses at low elevations and pine at higher elevations. Contrasts in hillslope vegetation cover together with storm activity may account for the different responses of the alluvial fans to climatic change during the Pleistocene to Holocene climatic transition. After the falls in lake levels of Lakes Lahontan and Mojave in the early Holocene, both areas underwent aridification, resulting in reductions in hillslope vegetation cover. Increased storm runoff led to fanhead trenching and distal progradation of the alluvial fans. Variations in fan style at that time may relate primarily to base-level conditions resulting from different gradients on the exposed lake shores.     

Quantitation of odor-active compounds in rye flour and rye sourdough using stable isotope dilution assays

Application of the aroma extract dilution analysis on a flavor distillate prepared from freshly ground rye flour (type 1150) revealed 1-octen-3-one (mushroom-like), methional (cooked potato), and (E)-2-nonenal (fatty, green) with the highest flavor dilution (FD) factors among the 26 odor-active volatiles identified. Quantitative measurements performed by stable isotope dilution assays and a comparison to the odor thresholds of selected odorants in starch suggested methional, (E)-2-nonenal, and hexanal as contributors to the flour aroma, because their concentrations exceeded their odor thresholds by factors >100. Application of the same approach on a rye sourdough prepared from the same batch of flour revealed 3-methylbutanal, vanillin, 3-methylbutanoic acid, methional, (E,E)-2,4-decadienal, 2,3-butanedione, and acetic acid as important odorants; their concentrations exceeded their odor thresholds in water and starch by factors >100. A comparison of the concentrations of 20 odorants in rye flour and the sourdough made therefrom indicated that flour, besides the fermentation process, is an important source of aroma compounds in dough. However, 3-methylbutanol, acetic acid, and 2,3-butanedione were much increased during fermentation, whereas (E,E)-2,4-decadienal and 2-methylbutanal were decreased. Similar results were obtained for five different flours and sourdoughs, respectively, although the amounts of some odorants in the flour and the sourdough differed significantly within batches.