Connectivity measures: a review

One of the central problems in contemporary ecology and conservation biology is the drastic change of landscapes induced by anthropogenic activities, resulting in habitat loss and fragmentation. For many wild living species, local extinctions of fragmented populations are common and recolonization is critical for regional survival. Successful recolonization depends on the availability of dispersing individuals and the degree of landscape connectivity. The obvious implications of landscape connectivity for conservation biology have led to a proliferation of connectivity measures. However, general relationships between landscape connectivity and landscape structure are lacking, and so are the relationships between different connectivity metrics. Consequently, there is a need to develop landscape metrics that more accurately characterize the landscape with an emphasis on the underlying processes. Here we review various definitions of landscape connectivity, explain their mathematical connotations, and make some unifying conclusions and suggestions for future research.     

Preventive and therapeutic efficacy of halofuginone-lactate against Cryptosporidium parvum in spontaneously infected calves: a centralised, randomised, double-blind, placebo-controlled study

The preventive and therapeutic efficacy of halofuginone-lactate (HFL) against Cryptosporidium parvum was evaluated in a study conducted from November 2004 to March 2005 on a dairy farm in Central Bohemia, Czech Republic, using 260 spontaneously infected calves. HFL (0.1 mg/kg/day) was administered orally for 7 days to 1-day-old and 8-day-old calves, respectively. In both treated groups the drug significantly, and in almost the same manner, decreased the intensity of diarrhoea (P<0.001) and faecal oocyst count (P<0.001) when compared to corresponding placebo groups. The only difference between both treated groups was the time of onset of symptoms of the infection. Over time, the clinical pattern of cryptosporidiosis in the animals treated at 8-14 days of age was similar to that seen in the groups receiving the placebo. In contrast, infection in the preventively treated group peaked about 10 days later but with the same intensity. The results of this study confirm the anticryptosporidial activity of HFL in calves, but show that the outcome of infection following preventive treatment is comparable to that observed in calves treated after the onset of symptoms.     

Efficiency of foliar selenium application on oilseed rape (Brassica napus L.) as influenced by rainfall and soil characteristics

The Czech Republic is characterized by a low Se soil content, resulting in Se deficiency in crops, humans, and animals. This study investigated the response of oilseed rape to foliar application of selenate solution in a microscale field experiment conducted at two locations differing in soil and climatic conditions but with comparable total Se contents. Sodium selenate (Na₂SeO₄) was applied at two rates (25 and 50 g Se ha^?1). The potential effect of Se application on the uptake of essential elements was also evaluated. The foliar Se application resulted in an effective stepwise increase in the Se contents of all the plant components studied (leaves > stems > roots > siliques ~ seeds), as expected. No significant influence of Se fortification on the other investigated macro- and microelements was observed. However, the soil and climatic conditions influenced the Se uptake, such that a higher Se content was observed in plants grown in the most acidic location (Cambisol soil) that had a higher oxidizable carbon content and higher average annual rainfall compared to the less acidic location (Luvisol soil). These observations indicated the necessity to optimize the Se application for the particular soil and climatic conditions to achieve a maximum biofortification effect.     

Regulation of macro,micro, and toxic element uptake by <Emphasis Type="Italic">Salix</Emphasis> × <Emphasis Type="Italic">smithiana</Emphasis> using liming of heavily contaminated soils

Purpose

Willow cultivation in soils heavily contaminated by risk elements is a challenging issue due to phytotoxic effects that restrict plant growth. Liming reduces the mobility of some risk elements in contaminated soils and therefore can be a suitable measure for contaminated soils but can also affect availability of nutrients for planted willows. We investigate how liming affects concentrations of macro, micro, and toxic elements in the organs of willows planted in contaminated soils.

Materials and methods

We established a 3-year pot experiment with Salix × smithiana planted in weakly acid and alkaline soils anthropogenically seriously contaminated by As, Cd, Pb, and Zn. Soils were both untreated and treated with two doses of lime and dolomite in the first year before planting. We determined biomass production, mortality, and the concentration of macro- and micronutrients and toxic elements in the willows’ aboveground organs.

Results and discussion

Lime application increased biomass production in both soils; dose of lime played an important role for its increase only in alkaline soil. Lime in a higher dose was incompatible with the vitality of just-planted willows in both soils. Doses of dolomite significantly affected the biomass production and mortality of willows, where lower doses caused a permanent decrease of biomass production and mortality in weakly acid soil. The toxicity of Cd and Zn in leaves was recorded in both untreated soils; the latent deficiency of P and deficiency of Fe in leaves was only recorded in weakly acid untreated soil.

Conclusions

Lime application irrespective of dose with foliar Fe application seemed to be the most suitable measure for increasing biomass production and decreasing toxic elements, especially Cd and Zn, without decreasing the macro- and micronutrients in the aboveground organs of willows in weakly acid soil. In alkaline soil, only higher doses of lime had a positive effect on the studied parameters. Dolomite application is not a suitable measure for planting willows in both contaminated soils. Dolomite in a lower dose impairs the growth of willows in weakly acid soil.

     

Influence of Rhizon MOM suction cup and Triticum aestivum L. on the concentration of organic and inorganic anions in soil solution

Journal of Soils and Sediments - Rhizon suction cups are widely used for soil water sampling. However, available literature about the variability and stability of organic and inorganic anions in...     

Thermal destruction of soil water repellency and associated changes to soil organic matter as observed by FTIR spectroscopy

The heat generated during wildfires often leads to increases in soil water repellency. Above a critical heating threshold, however, its destruction occurs. Although the temperature thresholds for repellency destruction are relatively well established, little is known about the specific changes in the soil organic matter that are responsible for repellency destruction. Here we report on the analysis of initially water repellent surface soil samples (Dystric Cambisol, 0–5 cm depth) by transmission Fourier Transform Infrared (FTIR) spectroscopy analysis before and after destruction of its water repellency by heating to 225 °C in order to investigate heating-induced changes in soil organic matter (SOM) composition. Although assignment of absorption bands is made difficult by overlapping of some bands, it was possible to distinguish bands relevant for hydrophobicity of SOM in the soil before heat treatment. The most significant decrease in absorbance following water repellency destruction took place in the frequency area corresponding to stretching vibrations of aliphatic structures within SOM. The results suggest that besides a general decrease of SOM content during heating, the loss of soil water repellence is primarily caused by the selective degradation of aliphatic structures.     

Application of MS-Based Metabolomic Approaches in Analysis of Starfish and Sea Cucumber Bioactive Compounds

Today, marine natural products are considered one of the main sources of compounds for drug development. Starfish and sea cucumbers are potential sources of natural products of pharmaceutical interest. Among their metabolites, polar steroids, triterpene glycosides, and polar lipids have attracted a great deal of attention; however, studying these compounds by conventional methods is challenging. The application of modern MS-based approaches can help to obtain valuable information about such compounds. This review provides an up-to-date overview of MS-based applications for starfish and sea cucumber bioactive compounds analysis. While describing most characteristic features of MS-based approaches in the context of starfish and sea cucumber metabolites, including sample preparation and MS analysis steps, the present paper mainly focuses on the application of MS-based metabolic profiling of polar steroid compounds, triterpene glycosides, and lipids. The application of MS in metabolomics studies is also outlined.     

Dynamics of windthrow events in a natural fir-beech forest in the Carpathian mountains

The age of single windthrows (single uprooted trees and/or pit/mound microtopographical pairs) in a natural fir-beech forest was assessed in the flysch zone of the Outer Western Carpathians. The following characteristics were evaluated for all 1562 single windthrows occurring in a 10.8 ha area: dimensions; thickness of organic and upper mineral soil horizons both on mounds and in pits; and the presence of new trees taking root on the windthrows. For more recent windthrows, selected quantitative and qualitative characteristics of the uprooted trees were evaluated. A suppositional gradient of age (SGA) was constructed based on the windthrow characteristics using principal component analysis. A representative sample of windthrows was dated along the SGA with the use of dendroecological techniques and historic records from 1972 and 1995. For European beech (Fagus sylvatica L.) we were able to measure the actual threshold of release value – at 12% of growth change. The age of windthrows was determined in 37 of a total of 51 cases. The development of windthrow properties over time was studied. Age explained 33.7% of the variability in the measured windthrow characteristics (F = 19.31, p = 0.0002, measured characteristics see above). A multiple regression model (R² = 0.844, F = 65.62, p < 1 × 10⁻⁶) was constructed to evaluate the age of undated windthrows. The best predictors of age were: ordinal classification of trunk disintegration and thickness of F and A horizons on the mound.     

The effect of tillage practice,input level and environment on the grain yield of winter wheat in the Czech Republic

The response of winter wheat grain yield to four variants of treatment (two input levels, combined with either conventional or reduced tillage) was tested over six seasons at three locations. These experiments with 10 and 12 winter wheat varieties were analysed within three experimental series. The environmental (location and season) effects on grain yield were large in all combinations of input level and tillage type, and the varieties responded differentially to both season and location. However, there was no varietal response either to the tillage system used, or to the level of nitrogen (and other inputs) supplied. The high input reduced tillage system (surface stubble-ploughing to a depth of 8–10 cm) resulted in all series in significantly higher grain yields than the equivalent conventional tillage system. The reduced tillage system combined with high input level delivered a yield advantage for all of the wheat varieties tested.     

Size, shape and surface morphology of starch granules from Norway spruce needles revealed by transmission electron microscopy and atomic force microscopy: effects of elevated CO(2) concentration

We compared the effects of ambient (350 ppm) and elevated CO(2) concentration (700 ppm) on the size and shape of starch granules in Norway spruce (Picea abies (L.) Karst.) needles during one growing season. Starch granules were isolated from needles by alkaline digestion and analyzed by transmission electron microscopy (TEM) and atomic force microscopy (AFM). Measurements made with a particle size analyzer indicated that starch granules ranged between 0.5 and 10 microm. Granule size and shape varied according to needle developmental stage and CO(2) concentration. Generally, elevated CO(2) concentration increased the size of the starch granules. Fine surface structures (< 10 nm in size) studied by AFM were characterized by the presence of protrusions, furrows and pores.