Levels of domestication in fish: implications for the sustainable future of aquaculture

The agricultural world today is dominated by a few domesticated mammal species, that is, animals modified from their wild ancestors through selective breeding in captivity for traits beneficial to human usages. As a result, a clear dichotomy exists between wild (from hunting) and domesticated mammals (produced in farms) used for human consumption. Similar to agriculture, aquaculture is often viewed as the only solution that can provide more fish products given that harvesting wild stocks have reached an upper limit. Aquaculture is considerably younger than agriculture relying on natural sources to farm numerous species. To better describe the diverse strategies for fish production, we propose a new classification comprising five levels of ‘domestication’ with 1 being the least to 5 being the most domesticated. Our classification places 70% of the 250 farmed finfish species recorded in the 2009 FAO database into levels 1, 2 and 3 representing a transitory form of fish production dependent on the availability of the wild resource. In contrast, only a few species, or more accurately populations, can be considered truly domesticated, similar to cattle or sheep. Based on this classification, two scenarios for the future of aquaculture are discussed: either the industry focuses on few truly domesticated species, similar to the path taken by agriculture, but avoiding its negative impacts or aquaculture proceeds with inter‐specific diversification by focusing primarily on the domestication of native species.     

Development of two microsatellite multiplex PCR systems for high throughput genotyping in Populus euphratica

Eighteen microsatellite primer pairs previously developed at Oak Ridge National Laboratory for Populus tremuloides Michx. and Populus trichocarpa Torr. & Gray were screened for amplification in Euphrates poplar, Populus euphratica Oliv. Thirteen loci were found to express polymorphisms ranging from two to 17 alleles. The eight most variable loci were selected to set up and optimize two multiplex polymerase chain reaction (PCR) assays. Three populations containing altogether 436 trees were used to characterize the selected loci and ascertain their applicability for parentage analysis and genotyping studies. Through cross-checking of clonal identity against sex of the genotyped trees we estimated the maximum error rate for merging genotypes to be less than 0.045. Foundation project: This study was supported by the Deutsche Forschungsgemeinschaft DFG (grant number SCHN 1080/1-1)     

两种微卫星多样PCR系统应用于胡杨高效生产基因型

对已在橡树岭国家实验室建立起来的美洲山杨(Populus tremuloides Michx.)和毛果杨(Populus trichocarpa Torr.＆ Gray)18个微卫星引物进行筛选,用于胡杨相关基因的扩增.发现有13个基因位点可以表达基因多态性,范围是2～17个等位基因.选择了8个最易变的基因位点,来构建和优化2种多样PCR法.用来自3个种群的436株树木表征选择的位点,确定他们在亲缘关系分析、基因型研究的适用性.通过克隆基因型鉴定树木性别的交叉检验,我们估计并入基因型最大误差率小于O.045.     

Participatory plant breeding approach for host plant resistance to bean fly in common bean under semi-arid Kenya conditions

Common bean (Phaseolus vulgaris L.) is the most important legume crop in Kenya. It is cultivated across a wide range of agro-ecologies which include high potential and marginal areas. Eastern Kenya alone, largely semi-arid, accounts for 35% of the country’s total bean production. Bean farmers mainly small-scale have limited access to quality seed, chemical pesticides and fertilizer. Therefore, bean yield under on-farm conditions still remains below 500 kg ha⁻¹ while the potential is about 1,200 kg ha⁻¹ under semi-arid conditions. To asses the farmers’ views on bean varieties and a key insect pest and associated constraints contributing to yield loss, research was undertaken. The research included survey to quantify the yield loss and Participatory Rural Appraisal to determine the level of adoption and criteria for variety choice in semi-arid eastern Kenya (SAEK). The results show that farmers consider drought and insect pest problems as main causes for low yields. The adoption rate for improved varieties is high but self sufficiency in beans stands at 23% in the dry transitional (DT) agro-ecology and at 18% in the dry mid-altitude (DM) agro-ecology, respectively. This could be attributed to low adaptability since most of the improved varieties grown were selected for high potential areas but now found in marginal areas. Drought, earliness, yield stability, and insect pest resistance are the main reasons for choice of varieties by farmers. Bean fly (Ophiomyia sp.) was identified as one of the key crop pests of beans limiting yield. Besides, African bollworm (Helicoverpa armigera) and bean aphid (Aphis fabae) were ranked higher. Due to limitations of the conventional breeding approach, a participatory plant breeding approach is suggested so as to provide an opportunity to develop insect pest resistant varieties adapted to the SAEK region.     

Antibacterial activity in microalgae cultures

Five cultures of microalgae (Chlorella minutissima, Tetraselmis chui, Nannochloropsis sp., Arthrospira platensis and Isochrysis sp.) with no culturable bacteria were tested for their ability to inhibit the growth of six Vibrio bacterial strains (V. parahaemolyticus, V. anguillarum, V. splendidus, V. scophthalmi, V. alginolyticus and V. lentus). The influence of light on the antibacterial activity of the microalgae was investigated. All microalgae cultures inhibited the growth of bacteria compared with the control treatments (P < 0.05), and their antibacterial activity was not influenced by the presence or absence of light. In the control groups, the numbers of bacteria increased exponentially during the experimental period in the absence of microalgae cells demonstrating that the bacterial cells were able to utilize the growth medium of microalgae cultures. The present results may explain the low levels or absence of Vibrio strains in microalgae cultures, and the positive effect of addition of microalgae in rearing of fish larvae, and implicate the production of antibacterial compounds by microalgae cells.     

PESO: a modelling framework to help improve management strategies for epidemics – application to sharka

The optimization of management strategies for plant diseases is a difficult task because of the complexity and variability of epidemic dynamics. Thanks to their ability to numerically simulate many scenarios, models can be used to estimate epidemiological parameters, assess the effectiveness of different management strategies and optimize them. This article presents the PESO (parameter estimation–simulation–optimization) modelling framework to help improve plant disease management strategies. This framework is based on (i) the characterization of the epidemic dynamics to estimate key epidemiological parameters, (ii) the use of spatially explicit models to simulate epidemic dynamics and disease management, and (iii) the use of numerical optimization methods to identify better management strategies. This approach is generic and can be applied to many diseases. The work presented here focuses on sharka (caused by Plum pox virus), which has a worldwide impact on the Prunus industry, and is associated with huge disease management costs in many countries, especially in France.     

Removal of Phenolic Compounds from Aqueous Solutions Using Sludge-Based Activated Carbons Prepared by Conventional Heating and Microwave-Assisted Pyrolysis

Sludge-derived activated carbons (ACs) were prepared by conventional heating and microwave pyrolysis. The ACs were characterized using several analytical and functional techniques and used for removal of six phenolic compounds from aqueous solutions. The adsorbents exhibited similar features and possessed hydrophobic surfaces. The ACs were assigned mesoporous materials, with specific surface areas of up to 641 and 540 m² g^?1 for CAC-500 and MAC-980, respectively. The preliminary results indicated that phenol removal onto the ACs increased in the order: m-cresol?<?phenol?<?o-cresol?<?2-chrorophenol?<?2-nitrophenol?<?hydroquinone. Hydroquinone exhibited the highest adsorption capacity and was chosen to continue the remaining part of the experimental work—kinetic and isothermal studies. The adsorption kinetic and isotherm data were well described by the Avrami fractionary order and Redlich–Peterson models, respectively. The maximum amounts (Q _max) of hydroquinone adsorbed at 25 °C were too high, reaching 1218.3 and 1202.1 mg g^?1 for CAC-500 and MAC-980, respectively. The mechanism of adsorption was proposed in this work, and it was suggested that donor–acceptor complex and π–π interactions play major roles in the adsorption process. The adsorbents were also tested on simulated effluents. The two ACs displayed good efficiency for the treatment of industrial simulated effluents.     

The Advantages of Combining Low‐Density Lipoproteins with Glutamine for Cryopreservation of Canine Semen

Twenty sperm samples from five dogs were frozen in liquid nitrogen at ?196°C in 16 different media, two control media containing 20% egg yolk and 6% low‐density lipoproteins (LDL); 10 test media containing 6% LDL (the active cryoprotective ingredient of chicken egg yolk) combined with 10, 20, 30, 40, 50, 60, 70, 80, 90, and 100 mmol of glutamine respectively at 4%, 5%, 7%, and 8% LDL. Following thawing, sperm mobility was assessed using an image analyser, HAMILTON THORN CERROS 12. The percentage of mobile spermatozoa was 62.05% in the 6% LDL + 20 mmol glutamine medium compared with 48.90% in the egg yolk‐based medium (p < 0.05) or 57.55% for the 6% LDL medium (p < 0.05). Furthermore, in most cases, the motility parameters (average path velocity, curvilinear velocity, straight line velocity) in the 6% LDL + 20 mmol glutamine medium, were superior, to a statistically significant extent, to those in the control media. Finally, the 6% LDL + 20 mmol glutamine combination provides spermatozoa with better protection during freezing than egg yolk or the 6% LDL medium alone in terms of acrosome integrity (fluorescein isothiocyanate–Pisum sativum agglutinin test: p < 0.05), the flagellar plasma membrane (hypo‐osmotic test: p < 0.05 for 6% LDL), the DNA (acridine orange test; no significant difference) and the integrity of the acrosome (Spermac^® test: no significant difference).     

矮小型肉种鸡的新看法

"矮小型"肉种鸡进入市场已几乎有40年的历史,并且一直以来在家禽行业内存有争论,一些人表示支持利用这一鸡种,但也有些人表示对其不感兴趣。两者往往都夸大其有利或不利的一面,或者更倾向于考虑市场行情和环境条件的不同。让我们以实事求是的态度看待此鸡种!