Driving forces of landscape change - current and new directions

The concept of driving forces is gaining increasing attention in landscape-change research. We summarize the state of the art of this field and present new conceptual and methodological directions for the study of driving forces of landscape changes. These new directions address four major challenges faced by landscape-change studies, i.e., studying processes and not merely spatial patterns, extrapolating results in space and time, linking data of different qualities, and considering culture as a driver of landscape change. The proposed research directions include: studying landscape change across borders and transects, focusing on persistence as well as change, investigating rates of change, considering attractors of landscape change, targeting correlation and causality, and searching for precursors of landscape change. Based on established knowledge and the new approaches we outline a standard procedure to study driving forces of landscape change. We anticipate that our analytical and systematic approach increases the relevance of studies of landscape change for science as well as for the solution of real world problems.     

Differential detection and genetic relatedness of phytoplasmas in papaya

The genetic relatedness of phytoplasmas associated with dieback (PDB), yellow crinkle (PYC) and mosaic (PM) diseases in papaya was studied by restriction fragment length polymorphism (RFLP) analysis of the 16S rRNA gene and 16S rRNA/23S rRNA spacer region (SR). RFLP and SR sequence comparisons indicated that PYC and PM phytoplasmas were identical and most closely related to members of the faba bean phyllody strain cluster. By comparison the PDB phytoplasma was most closely related to Phormium yellow leaf (PYL) phytoplasma from New Zealand and the Australian grapevine yellows (AGY) phytoplasma from Australia. These three phytoplasmas cluster with the stolbur and German grapevine yellows (VK) phytoplasmas within the aster yellows strain cluster. Primers based on the phytoplasma tuf gene, which amplify gene products from members of the AY strain cluster, also amplified a DNA product from the PDB phytoplasma but not from either the PYC or PM phytoplasmas. Primers deduced from the 16S rRNA/SR selectively amplified rDNA sequences from the PDB and AGY phytoplasmas but not from other members of the stolbur strain cluster. Similarly, primers designed from 16S rRNA/SR amplified rDNA from the PYC and PM phytoplasmas but not from the PDB phytoplasma. These primers may provide for more specific detection of these pathogens in epidemiological studies.     

Detection of Erwinia herbicola pv. gypsophilae in gypsophila plants by PCR

Three PCR primer pairs, based on the cytokinins (etz) or IAA biosynthetic genes, were used for detecting Erwinia herbicola pv. gypsophilae in Gypsophila paniculata plants. The primers were specific to all gall-forming E. herbicola strains and distinguished them from saprophytic strains associated with gypsophila plants or from other gall-forming bacteria. In pure culture of the pathogen, less than one bacterial cell was detected with nested PCR using the etz primers - an increase of 100-fold in sensitivity as compared with single-round PCR. In the presence of plant extract a reduction of tenfold in sensitivity was observed by nested PCR. When cells were grown on a semi-selective medium prior to PCR (Bio-PCR), five cells from pure culture of the pathogen were detected. The bacteria could be detected by nested-PCR or Bio-PCR in symptomless gypsophila cuttings after 7 days. The Bio-PCR procedure described in this study can be used to establish disease-free nuclear stock of mother plants of gypsophila.     

Multiphasic analysis of xanthomonads causing bacterial spot disease on tomato and pepper in the Caribbean and central america: evidence for common lineages within and between countries

ABSTRACT Four hundred thirty-three xanthomonad strains isolated from tomato or pepper plants from 32 different fields in four Caribbean and Central American countries were screened for the ability to hydrolyze starch and sodium polypectate and for resistance to copper and streptomycin. Of these, 95 representative strains were further characterized by various phnetic tests, and 63 of these strains were then analyzed by genomic fingerprinting. Most of the strains (>90%) were tolerant to copper. However, there was much more variability in sensitivity to streptomycin. All strains in Guadeloupe and 93% of the strains in Barbados were sensitive to streptomycin. The majority of strains were typical Xanthomonas campestris pv. vesicatoria group A strains. In Barbados, however, a unique group of strains was identified that was serologically similar to group A strains but was amylolytic. These strains were designated A1. The occurrence of X. campestris pv. vesicatoria group B strains in Central America was found to be limited to two fields in Costa Rica and one in Guatemala. No group B strains were identified in the Caribbean, in contrast to common occurrence in the central United States and in South America. T3 strains were not found in this study, despite the recent increase of such strains in Florida and Mexico. Unique strains from Costa Rica belonging to the X. gardneri group were identified. Little linkage was found among phenotypic and rep-polymerase chain reaction (rep-PCR) genomic fingerprinting profiles of the pathogens except at the species/pathovar level; strains displaying virtually identical fingerprint profiles were found to correspond to distinct races and vice versa. The rep-PCR genomic fingerprinting analyses suggest that certain lineages may have evolved or predominated in specific regions or specific countries.     

Mortality in mink kits from birth to weaning

In 1988, a necropsy survey of the pattern and major causes of mortality in mink kits from birth to weaning was undertaken. The overall preweaning mortality rate was 20%. Mortalities occurring within the first three days after birth accounted for 91% of submissions, and 78% of the kits in this age group had no lesions or bacterial isolates. The average weight of kits which died within one day of birth (7.9 g) was significantly lower than the average birthweight of healthy kits (10.7 g). In kits under four days of age and with lesions, the most common diagnoses were dystocia (12%), systemic infection (4%), anasarca (2%), and congenital defects (1%). In unweaned kits four days of age or older, the most common diagnoses were systemic infection (19%), external trauma (6%), dystocia (5%), and cervical adenitis (2%).     

武汉地区马铃薯Y病毒株系的类型

马铃薯Y病毒(PVY)是严重危害我国马铃薯生产的主要病毒之一。本研究通过RT-PCR的方法,对依据症状采集的124份马铃薯叶片样品进行了病毒检测,并对其中PVY阳性样品进行了株系类型分析。结果显示,在93份PVY阳性样品中,PVYN/NTN/N??O类型株系占60.2%,而PVYO普通株系占20.4%,还有18个样品(19.4%)显示受到两种类型PVY的混合侵染。进一步分析表明,在PVYN/NTN/N??O类型株系中,PVYNTN、PVYN??O和PVYN三种株系分别占83.8%、12.2%和4.0%;而PVYO普通株系中,PVYO-FL和PVYO-RB两种变异型各占70.3%和29.7%。本研究结果显示,PVYNTN和PVYO-FL是检测样品中主要的PVY株系,该结果为指导马铃薯PVY的防治提供一定的依据。     

Differentiation of the closely related species,Alternaria solani and A. tomatophila,by molecular and morphological features and aggressiveness

The main causal agent of early blight, the noxious disease of solanaceous crops, is generally considered to be Alternaria solani Sorauer (in a broad sense). However, heterogeneity in many morphological features of this pathogen has been noted suggesting that the disease may not be caused by a single species. Recent research has revealed that several large-spored Alternaria species may cause disease of potato and tomato including A. solani sensu stricto and A. tomatophila. The goal of our research was to compare Russian large-spored Alternaria isolates from tomato and potato to test the hypothesis that early blight of tomato and potato are caused by different species. Cluster analysis of genetic distances estimated from 12 polymorphic molecular markers (universally primed-polymerase chain reaction and randomly amplified polymorphic DNA) revealed two groups of isolates accepted here as A. solani and A. tomatophila that were supported by morphology and host plant association. Differentiation of species was supported by phylogeny derived from the DNA sequences of a portion of the Alt a1, gpd and calmodulin genes. Species-specific primers based on the Alt a1 and calmodulin gene sequences for both species were designed. Under laboratory conditions, A. solani isolates were equally aggressive on both tomato and potato, whereas A. tomatophila was highly aggressive to tomato but only weakly aggressive to potato. In the field, A. solani was isolated from potato, tomato and from several wild potato species including S. schickii, S. papita and S. kurtzianum. The majority (90 %) of A. solani isolates carried the mating type locus 1 (MAT1) idiomorph MAT1-1 while the majority (88 %) of A. tomatophila isolates carried the MAT1-2 idiomorph.     

Verification of mitotic gynogenesis in ornamental (koi) carp (Cyprinus carpio L.) using microsatellite DNA markers

The Japanese ornamental (koi) carp is a popular decorative fish all over the world. In koi, clones have not yet been obtained, although production of fish with identical colour patterns could be of commercial interest. Mitotic gynogenetic progenies are essential for subsequent production of clones in fish. However, resulting late‐shocked progenies may be contaminated with meiotic gynogens from spontaneous suppression of the second meiotic division in eggs. In this study, microsatellite DNA markers were used to confirm mitotic gynogenetic origin of obtained late‐shocked progenies. Recombination rate (y) and mapping distance relative to centromere (M‐C) of 10 microsatellite loci were determined based on percentage of heterozygotes in meiotic gynogenetic progenies. The range of y varied from 0.01 to 0.96 and the M‐C map ranged from 0.5 to 48 cM. The mean value of y over the 10 loci was 0.481. Six loci, which had y 0.47 and higher, were used as markers in two late‐shocked gynogenetic progenies. Complete homozygosity was revealed at all six microsatellite loci indicating mitotic gynogenetic origin of analysed progenies.     

Trading in waste: Integrating sustainable development goals and environmental policies in trade negotiations toward enhanced solid waste management in Pacific Islands countries and territories

This paper provides a broad survey of existing literature on contemporary solid waste management (SWM) in the Pacific region to underscore an urgent and compelling need for improved SWM. Despite advances in waste management systems and funding for technical support and capacity building from a range of sources, waste continues to threaten public and ecological health and the economy in Pacific Islands Countries and Territories (PICTs). SWM in the Pacific requires innovative thinking in a challenging environment of remoteness, limited available land, fragile ecosystems, vulnerability to natural hazards and subsequent climate sensitivity. Many PICTs are under considerable pressure to open their markets up to trade liberalisation. Increasing links to the global economy through trade liberalisation could either further exacerbate waste management challenges in the Pacific or contribute to environmental protection and sustainable development goals. The authors argue that if the PICTs' urgent waste management challenges are to be meaningfully addressed, the region's leaders must ensure trading partners conform to local environmental protection policies and that trade agreements align with sustainable development goals.