Description and validation of a magnetic resonance imaging-guided stereotactic brain biopsy device in the dog

A stereotactic brain biopsy system that is magnetic resonance (MR) imaging-guided has not been validated in dogs. Our purpose was to determine the mean needle placement error in the caudate nucleus, thalamus, and midbrain of a canine cadaver brain using the modified Brainsight stereotactic system. Relocatable reference markers (fiducial markers) were attached to the cadaver head using a dental bite block. A T1-weighted gradient echo three-dimensional (3D) sequence was acquired using set parameters. Fiducial markers were used to register the head to the acquired MR images in reference to a 3D position sensor. This allowed the planning of trajectory path to brain targets in real time. Coordinates (X, Y, Z) were established for each target and 0.5 microl of diluted gadolinium was injected at each target using a 26-gauge needle to create a lesion. The center of the gadolinium deposition was identified on the postoperative MR images and coordinates (X', Y', Z') were established. The precision of this system in bringing the needle to target (needle placement error) was calculated. Seventeen sites were targeted in the brain. The mean needle placement error for all target sites was 1.79 +/- 0.87 mm. The upper bound of error for this stereotactic system was 3.31 mm. There was no statistically significant relationship between needle placement error and target depth (P = 0.23). The ease of use and precision of this stereotactic system support its development for clinical use in dogs with brain lesions > 3.31 mm.     

Axial forces and bending moments in the loaded rabbit tibia in vivo

Background

Different animal models are used as fracture models in orthopaedic research prior to implant use in humans, although biomechanical forces can differ to a great extend between species due to variable anatomic conditions, particularly with regard to the gait. The rabbit is an often used fracture model, but biomechanical data are very rare. The objective of the present study was to measure axial forces, bending moments, and bending axis directly in the rabbit tibia in vivo. The following hypothesis was tested: Axial forces and bending moments in the mid-diaphysis of rabbit tibia differ from other experimental animals or indirectly calculated data.

Methods

A minifixateur system with 4 force sensors was developed and attached to rabbit tibia (n = 4), which were subsequently ostectomised. Axial forces, bending moments and bending angles were calculated telemetrically during weight bearing in motion between 6 and 42 days post operation.

Results

Highest single values were 201% body weight [% bw] for axial forces and 409% bw cm for bending moments. Whereas there was a continous decrease in axial forces over time after day 10 (P = 0.03 on day 15), a decrease in bending moments was inconsistent (P = 0.03 on day 27). High values for bending moments were frequently, but not consistently, associated with high values for axial forces.

Conclusion

Axial forces in rabbit tibia exceeded axial forces in sheep, and differed from indirectly calculated data. The rabbit is an appropriate fracture model because axial loads and bending moments in rabbit tibia were more closely to human conditions than in sheep tibia as an animal model.     

Diversity of currently circulating rabies virus strains in Croatia

Sylvatic rabies has been present in Croatia for more than three decades, with the red fox (Vulpes vulpes) as the main reservoir. The present epidemic of sylvatic rabies in Croatia started already in 1977 and in the past ten years the disease has become enzootic in the entire country and thus represents a considerable veterinary and public health threat. A genetic characterization and phylogenetic analysis of rabies virus isolates (RABV) from Croatia was performed using panel of 32 selected rabies-positive brain samples from domestic and wild animals collected between 2008 and 2010. Based on the comparison of 367-nucleotide sequences of a conserved region of the nucleoprotein (N) gene (nucleotides 75-441), the phylogenetic analysis revealed a low genetic diversity of currently circulating RABV strains in Croatia. 18 RABV isolates mainly originating from Eastern Croatia clustered with the formerly established Eastern European (EE) lineage, and the rest (14) were identical with the West European (WE) group. Both phylogenetic groups seem to coincide in central regions on both sides along the Save River. A high sequence identity in the N gene of the RABV isolates from neighbouring countries was found.     

Application of network analysis parameters in risk-based surveillance - examples based on cattle trade data and bovine infections in Sweden

Financial resources may limit the number of samples that can be collected and analysed in disease surveillance programmes. When the aim of surveillance is disease detection and identification of case herds, a risk-based approach can increase the sensitivity of the surveillance system. In this paper, the association between two network analysis measures, i.e. 'in-degree' and 'ingoing infection chain', and signs of infection is investigated. It is shown that based on regression analysis of combined data from a recent cross-sectional study for endemic viral infections and network analysis of animal movements, a positive serological result for bovine coronavirus (BCV) and bovine respiratory syncytial virus (BRSV) is significantly associated with the purchase of animals. For BCV, this association was significant also when accounting for herd size and regional cattle density, but not for BRSV. Examples are given for different approaches to include cattle movement data in risk-based surveillance by selecting herds based on network analysis measures. Results show that compared to completely random sampling these approaches increase the number of detected positives, both for BCV and BRSV in our study population. It is concluded that network measures for the relevant time period based on updated databases of animal movements can provide a simple and straight forward tool for risk-based sampling.     

Effects of Simplicillium lanosoniveum on Phakopsora pachyrhizi, the soybean rust pathogen, and its use as a biological control agent

The fungus Simplicillium lanosoniveum was isolated from soybean leaves infected with Phakopsora pachyrhizi, the soybean rust pathogen, in Louisiana and Florida. The fungus did not grow or become established on leaf surfaces until uredinia erupted, but when soybean rust signs and symptoms were evident, S. lanosoniveum colonized leaves within 3 days and sporulated within 4 days. Development of new uredinia was suppressed by about fourfold when S. lanosoniveum colonized uredinia. In the presence of S. lanosoniveum, uredinia became increasingly red-brown, and urediniospores turned brown and germinated at very low rates. Assays using quantitative real time polymerase chain reaction revealed that the fungus colonized leaf surfaces when plants were infected with P. pachyrhizi, either in a latent stage of infection or when symptoms were present. However, when plants were inoculated before infection, there was no increase of DNA of S. lanosoniveum, suggesting that the pathogen must be present in order for the antagonist to become established on soybean leaf surfaces. We documented significantly lower amounts of DNA of P. pachyrhizi and lower disease severity when soybean leaves were colonized with S. lanosoniveum. These studies documented the mycophilic and disease-suppressive nature of S. lanosoniveum.     

Biodiversity, vegetation gradients and key biogeochemical processes in the heathland landscape

The northwest European heathland landscape with its characteristic communities of nutrient-poor and acidic soils has a high nature value, because of its locally high biodiversity and the distinct site conditions. In order to conserve and restore the heathlands, numerous rehabilitation projects have been performed, although with varying success. This is partly due to the fact that the key biogeochemical processes distinguishing the various vegetation types within the heathlands are not known in detail.Therefore, we performed a statistical survey on the main communities and their soil characteristics. In addition, we analyzed the data for key factors determining biodiversity in the heathland landscape.Data from previous studies and surveys was used to compile a dataset of 267 vegetation relevés (classified as EUNIS habitat types) with extensive soil measurements (22 parameters). A canonical discriminant analysis revealed that soil acidity explained most of the differences between the habitat types, while soil moisture content and soil fertility were less important. Acidity-related factors as Al³⁺, Al/Ca-ratio and pH were also strongly correlated to plant diversity in the majority of the habitat types, respectively, the species-rich Nardus grasslands, the Rhynchosporion communities and the species-rich Molinia meadows. In the dry heaths and over the total heathland landscape, plant diversity was negatively correlated with soil -concentrations. Only in wet heath, nutrient availability, in this case P, was the primary factor in explaining plant diversity.This study presents ranges for all major soil parameters for the studied well-developed heathland habitat types, thereby providing clear guidelines for conservation and restoration.     

Organic carbon in soils of Germany: Status quo and the need for new data to evaluate potentials and trends of soil carbon sequestration

Uncertainties in estimates of soil carbon (C) stocks and sequestration result from major gaps in knowledge of C storage in soils, land‐use history, the variability of field measurements, and different analytical approaches applied. In addition, there is a lack of long‐term datasets from relevant land‐use systems. As in many European countries, a national database on soil organic carbon (SOC) including all relevant information for the determination of soil C stocks is likewise missing in Germany. In this paper, we summarize and evaluate the present state of knowledge on organic‐C contents/pools in soils of Germany and discuss the need for the acquisition and access to new data on soil organic carbon. Despite the number of agricultural sites under permanent soil monitoring, regional surveys on SOC, comprehensive ecosystem studies, and long‐term field experiments, there is a striking lack of data in Germany particularly with regard to agricultural soils. Apart from a missing standardization of methods and homogeneous baseline values, the implementation of a periodic, nation‐wide soil inventory on agricultural soils is required in order to simultaneously record information on land use, land‐use change, and agricultural practice. In contrast, the existing national inventory of forest soils provides information on C‐stock changes in forest soils, although there is some concern with regard to the representativeness of the sampling design to adequately address the problem of spatial heterogeneity and temporal variability. It is concluded that the lack of comprehensiveness, completeness, actuality, data harmonization, and standardized sampling procedures will further prevent the establishment of a SOC database in Germany with regard to the monitoring of trends in soil C pools and fluxes and the assessment of long‐term C‐sequestration potentials of soils under different land use. A future soil inventory should represent the heterogeneity of organic matter through functionally different SOC pools, topsoil characteristics as well as content, pool, and flux data for the deeper mineral‐soil compartments.     

Carbon accumulation in Umbrisols under Quercus pyrenaica forests: Effects of bedrock and annual precipitation

The objective of this study was to determine the effect of bedrock, mean annual precipitation and slope orientation on soil organic carbon (SOC) accumulation of Quercus pyrenaica Willd forests. Twelve different oak stands, along a rainfall gradient over two bedrock types (granites and schists), were selected for this study. Properties of the diagnostic soil horizons were determined. Bedrock type was the principal factor affecting soil development and fertility. Accumulated SOC varied between 33 and 185 Mg C ha^− 1, the amounts of C accumulated over schists being significantly higher than over granites because of higher soil acidity, ‘silt + clay’ content and metal complexation. The SOC content in the entire profile was over 125 times higher than the C accumulated in the stand forest litter at the schist sites and 50 times higher at the granite sites. Soil acidity and metal complexation hampered microbial decomposition of soil organic matter, producing SOC accumulation and forming thick umbric Ah/AB-horizons, being thicker at sites with high values of mean annual precipitation than at sites with low ones. Mineral N release was low in these soils.