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Tileye Feyissa Hilde Nybom Igor V. Bartish Margareta Welander 《Genetic Resources and Crop Evolution》2007,54(5):947-958
Genetic diversity within and among 12 populations of the dioecious tropical tree species Hagenia abyssinica (Bruce) J.F. Gmel. in Ethiopia was examined with eight inter simple sequence repeat (ISSR) primers. A total of 104 clearly
scorable bands were generated, among which 84 (81%) were polymorphic. Jaccard similarity coefficient was calculated for pairwise
comparisons among all 120 individuals and ranged from 0.30 to 0.88 while average within-population similarity ranged from
0.53 to 0.66. Within-population variability was estimated as percentage polymorphic loci (ranging from 52% to 87%), Shannon’s
information index (0.30–0.50) and Nei’s genetic diversity (0.21–0.35). The highest variability values were obtained for one
recently planted population and for one wild population growing in an undisturbed primary forest area. Significant overall
differentiation among populations was detected by both Shannon’s information index (0.26) and G
ST (0.25). Relatedness among samples was estimated with a principal coordinate analysis, and relatedness among populations was
estimated with a cluster analysis (UPGMA). A Mantel test indicated a significant association between genetic and geographic
distances, and an autocorrelation analysis showed significant evidence of gene flow over distances up to 30 km. This study
is the first of its kind for H. abyssinica, which has decreased recently in Ethiopia and now must be regarded as an endangered species. Both within-population and between-population
diversity estimates are typical of outcrossing, longlived and late successional species, suggesting that recent anthropogenic
disturbances have not yet had much impact on population genetic parameters. DNA marker data can, however, be used to identify
the most suitable sites for in situ conservation and for collection of material for establishment of genebanks and plant improvement programs. 相似文献
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Kebede Gezahagn Feyissa Fekede Assefa Getnet Alemayehu Mengistu Mengistu Alemayehu 《Journal of Crop Science and Biotechnology》2020,23(3):215-228
Journal of Crop Science and Biotechnology - Vetch is an annual forage legume and accessions of its species performed differently under different soil conditions. Twenty accessions of five vetch... 相似文献
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Abreham Bekele Tileye Feyissa Kassahun Tesfaye 《Genetic Resources and Crop Evolution》2014,61(3):707-719
Anchote (Coccinia abyssinica) is plant endemic in Ethiopia with a high calcium content grown for its edible tuberous roots. In spite of its importance as food security crop, there is no information available on molecular genetic diversity of this crop. Therefore, the aim of this study was to assess genetic diversity within and among 12 populations of anchote using ISSR markers. Using nine ISSR primers, a total of 87 scorable bands was generated of which 74 were polymorphic. Within population diversity based on polymorphic bands ranged from 13.8 to 43.53 % with a mean of 33.05 %, Nei’s genetic diversity of 0.04–0.156 with a mean of 0.12, Shannon information index of 0.07–0.23 with a mean of 0.175 and analysis of molecular variation (AMOVA) of 51.4 % were detected. With all diversity parameters, the highest diversity was obtained from Gimbi, Bedele and Ale populations, whilst the lowest was from Manna. AMOVA showed a 48.56 % between populations variability and significantly lower than that of within population variation. Population differentiation with FST was 48.56 %. From Jaccard’s pairwise similarity coefficient, Decha and Nedjo were most related populations exhibiting 0.76 similarity and Manna and Nedjo were the most distantly related populations with similarity of 0.52. The only pentanucliotide primer used in the study, Primer 880 (GGAGA)3, showed a unique band in some individuals that appeared to be associated with morphological quantitative traits (lowest seed number, high protein content, largest fruit size and smallest vine length). Illubabor and Gimbi populations exhibited highest genetic diversity so that the populations should be considered as the primary sites in designing conservation areas for this crop. 相似文献