Trait variations in 28-year-old teak (Tectona grandis) provenance field trials in Ghana,West Africa

Stem straightness, axis persistence, presence/absence of protuberant buds and epicormics, diameter and height have profound influence on timber quality and volume of teak (Tectona grandis). Provenance trials of teak were established in the 1970s in Ghana, as part of the Food and Agriculture Organization (FAO) International Series of Provenance Trials, with the view of selecting teak germplasm for sites with specific environmental conditions. Two field trials were located in dry semi-deciduous (dry) and moist semi-deciduous (moist) ecological zones of Ghana. They consisted of 13 provenances, including four landraces each from Ghana and Indonesia, and two and three provenances from India and Laos, respectively. Trees were assessed at 9, 17 and 28 years to (1) quantify the potential variation in quality and timber volume production, (2) examine possibilities for determining early selection of parameters of superior provenances and (3) select provenances for sites with particular environmental conditions. Production traits were higher on the moist site than the dry site. Mean height was 23.2 and 20.2 m tree^?1, stem cross-sectional area at breast height was 0.0896 and 0.0474 m² tree^?1, and stem volume was 0.75 and 0.34 m³ tree^?1 for the moist and dry sites, respectively. Nilambur provenance from moist India had the highest mean stem straightness score of 19% above average, whereas Savannakhet from Laos had the best protuberant bud score with 18% of the trees above average. Indonesian landraces performed better in the dry zone, whereas provenances from India and Laos performed better in the moist zone. Phenotypic correlations between age 9 and 28 years were moderate (r 0.54–0.90) to high (r > 0.90) for production and qualitative characteristics, indicating feasibility of early assessment for identification of superior provenances. Nilambur and Savannakhet II provenances proved to be favourable choices for the moist zone, whereas the Temandsang provenance from Indonesia was found to be the best choice for the dry site.     

Efficacy of local eradication treatments against the sudden oak death epidemic in Oregon tanoak forests

Phytophthora ramorum, cause of sudden oak death, has been distributed widely across the United States in horticultural situations, but is not established in forests outside of California and Oregon. Here, it has triggered widespread concern and, especially in Oregon, an intensive disease management programme. Now, we provide the first systematic evaluation of the efficacy of that effort. This paper evaluates four measures of the efficacy of Sudden Oak Death (SOD) local eradication treatments: inoculum availability; inoculum from tree species other than tanoak; disease spread from treated areas; and cumulative infested area with and without treatment. We conclude that local treatments demonstrably reduce local inoculum levels. Eradication of SOD from infested sites is difficult but not impossible. The disease usually does not persist after cutting infected trees but spread on the landscape continues because the pathogen may be present on undetected new infections for a year or two before whole tree symptoms are visible. This limits early detection and coupled with delays in completing eradication treatments, prolongs the chances for long‐distance aerial dispersal.     

Farmers’ objectives toward their woodlands in the upper Midwest of the United States: implications for woodland volumes and diversity

This paper reports the results of a study that explores the relationship between farm woodland owners’ stated intentions for owning woodland, and the structure and composition of these woodlands in the states of Illinois, Indiana and Iowa in the upper Midwest of the United States. Data from two sample-based inventories conducted by the USDA Forest Service, Forest Inventory and Analysis (FIA) program were combined for this analysis—the FIA forest resources inventory and the National Woodland Owner Survey (NWOS). We looked for relationships between product value and investment in woodlands, as reflected in volumes and tree quality. We also examined whether measures of diversity reflected specific management focus. Our results partially supported our hypotheses. Woodland-focused ownership reasons were found to have larger volumes and individual tree sizes. We found that a passive woodland ownership reason—that woods were “part of the farm”—generally had lower volumes per hectare. Although we were not able to differentiate between different forest product classes and measures of volume, we did find that those landowners who harvested veneer had more volume than those who harvested for firewood. Woodland owners who salvage-harvested their woodlands—a harvesting reason that is more reactive than proactive—exhibited lower volumes per hectare than those who harvested for more proactive, product-focused reasons. Biodiversity was also found to be related to the ownership focus and harvest intent. Generally, there was lower diversity in overstory species when the woodland was viewed merely as “part of the farm,” when the product harvested was fence posts and when timber was harvested for salvage or land clearing. The small sample size limits our analysis, but we can conclude that focusing the woodland owners on management of their woodlands—regardless of what the specific management goals might be—should increase productivity and biodiversity of those woodlands.

Edge effects for songbirds vary with forest productivity

We hypothesized that edge density more strongly influences species abundances in more productive environments. To test this hypothesis we collected songbird point count data across broad biophysical gradients and gradients in forest patch edge density in the west and east slopes of the Cascade Mountains of Oregon and Washington, U.S.A., which differ in ecological productivity. We then analyzed bird response (75 species) at both the species and community level to gradients in edge density (m/ha) of open and closed-canopy forest within 1-km radius landscapes. We found that (1) differences in vegetation and structural conditions between open and closed-canopy stands were significantly greater at a highly productive landscape than a landscape with intermediate levels of productivity; (2) more bird species responded to changes in edge density in more productive west-slope Cascade forests than less productive east-side Cascade forests; (3) pooled abundance data from both sites showed that 25 of the 60 most abundant bird species responded significantly to the interaction between forest productivity and changes in landscape-level edge density; and, (4) at the community level, ordinations showed that bird community similarity in the productive west-slope Cascade forests differed across low and high levels of edge density whereas no such differentiation occurred in harsh, east-side Cascade forests. These results provide some of the first evidence supporting the hypothesis that edge effects are more pronounced in productive west-side forests where higher levels of edge density benefit generalist and open-canopy species while negatively influencing closed-canopy species. Consequently, forest management aimed at supporting species diversity will be most effective if tailored to ecosystem productivity.     

An Automated Near‐Infrared System for Selecting Individual Kernels Based on Specific Quality Characteristics

An automated sorting system was developed that nondestructively measured quality characteristics of individual kernels using near‐infrared (NIR) spectra. This single‐kernel NIR system was applied to sorting wheat (Triticum aestivum L.) kernels by protein content and hardness, and proso millet (Panicum miliaceum L.) into amylose‐bearing and amylose‐free fractions. Single wheat kernels with high protein content could be sorted from pure lines so that the high‐protein content portion was 3.1 percentage points higher than the portion with the low‐protein kernels. Likewise, single wheat kernels with specific hardness indices could be removed from pure lines such that the hardness index in the sorted samples was 29.4 hardness units higher than the soft kernels. The system was able to increase the waxy, or amylose‐free, millet kernels in segregating samples from 94% in the unsorted samples to 98% in the sorted samples. The portion of waxy millet kernels in segregating samples was increased from 32% in the unsorted samples to 55% after sorting. Thus, this technology can be used to enrich the desirable class within segregating populations in breeding programs, to increase the purity of heterogeneous advanced or released lines, or to measure the distribution of quality within samples during the marketing process.     

Identification and Characterization of U.S. Wheats Carrying Null Alleles at the wx Loci

Granule-bound starch synthase (GBSS) is the primary enzyme responsible for the synthesis of amylose in amyloplasts of cereal endosperm cells. Bread wheats, due to their hexaploid genetic system, carry three genes (wx loci) encoding GBSS. Purification and separation of GBSS from more than 200 North American hexaploid wheats allowed the identification of genotypes that carry null alleles at either the wx-A1 and wx-B1 loci. In addition, the cultivar Ike carried both wx-A1 and wx-B1 null alleles. No wx-D1 nulls were detected. Null alleles were found in 10% of the hard winter wheats tested, but in only 2% of the sampled soft winter wheats. Amylose contents of wheats carrying single null alleles at either the wx-A1 or wx-B1 loci often were lower than those of wild type wheats, but greater reduction in amylose content was observed in Ike. Monoclonal antibodies were used to quantify water-extractable GBSS in both wild-type and null genotypes. Gene dosage compensation was evident, although GBSS content, as measured by ELISA, was significantly lower in Ike than in all other wheats. The identification of null alleles in adapted genotypes suggests the development of wheats with a wide range of amylose contents will be possible by simple genetic crossing and selection.     

Anaesthesia of Atlantic cod (Gadus morhua) — Effect of pre-anaesthetic sedation, and importance of body weight, temperature and stress

The efficacy of the anaesthetic agents benzocaine, metacaine (MS-222), metomidate and 2-phenoxyethanol was studied in Atlantic cod (Gadus morhua) with average body weights of 10 ± 4 g, 99 ± 33 g and 1022 ± 274 g at water temperatures of 8 °C and 16 °C. The agents were tested individually and as combination anaesthesia comprising pre-anaesthetic sedation with a low dosage of metomidate or 2-phenoxyethanol followed by anaesthesia with benzocaine or MS-222. All agents were administered through bath immersion with an exposure time of 5 min. The different treatments resulted in average induction and recovery times ranging from 52 ± 6 s to 182 ± 16 s and 77 ± 26 s to 659 ± 46 s respectively. Induction and recovery times varied in relation to water temperature and were generally shorter at 16 °C for all weight groups and treatments compared to 8 °C. For benzocaine and MS-222 induction and recovery times were found to increase with increasing body weight. For metomidate the recovery time increased with increasing weight whereas there were no weight related differences in induction time. No differences in either induction or recovery times associated to body weight were found for 2-phenoxyethanol. Acute stress prior to anaesthesia with MS-222 resulted in significantly shorter induction time and prolonged recovery time, as well as deeper anaesthetised fish. The dosage of MS-222 had to be reduced in order to avoid mortality in fish subjected to acute stress. Combination anaesthesia allowed a reduction of the dosages used for inducing anaesthesia and produced markedly reduced recovery times compared to agents administered individually.     

Genetic population structure and variation at phenology-related loci in anadromous Arctic char (Salvelinus alpinus)

The Arctic will be especially affected by climate change, resulting in altered seasonal timing. Anadromous Arctic char (Salvelinus alpinus) is strongly influenced by sea surface temperature (SST) delimiting time periods available for foraging in the sea. Recent studies of salmonid species have shown variation at phenology-related loci associated with timing of migration and spawning. We contrasted genetic population structure at 53 SNPs versus four phenology-related loci among 15 anadromous Arctic char populations from Western Greenland and three outgroup populations. Among anadromous populations, the time period available for foraging at sea (>2°C) ranges from a few weeks to several months, motivating two research questions: (a) Is population structure compatible with possibilities for evolutionary rescue of anadromous populations during climate change? (b) Does selection associated with latitude or SST regimes act on phenology-related loci? In Western Greenland, strong isolation by distance at SNPs was observed and spatial autocorrelation analysis showed genetic patch size up to 450 km, documenting contingency and gene flow among populations. Outlier tests provided no evidence for selection at phenology-related loci. However, in Western Greenland, mean allele length at OtsClock1b was positively associated with the time of year when SST first exceeded 2°C and negatively associated with duration of the period where SST exceeded 2°C. This is consistent with local adaptation for making full use of the time period available for foraging in the sea. Current adaptation may become maladaptive under climate change, but long-distance connectivity of anadromous populations could redistribute adaptive variation across populations and lead to evolutionary rescue.