Development of a marker assisted selection program for cacao

ABSTRACT Production of cacao in tropical America has been severely affected by fungal pathogens causing diseases known as witches' broom (WB, caused by Moniliophthora perniciosa), frosty pod (FP, caused by M. roreri) and black pod (BP, caused by Phytophthora spp.). BP is pan-tropical and causes losses in all producing areas. WB is found in South America and parts of the Caribbean, while FP is found in Central America and parts of South America. Together, these diseases were responsible for over 700 million US dollars in losses in 2001 (4). Commercial cacao production in West Africa and South Asia are not yet affected by WB and FP, but cacao grown in these regions is susceptible to both. With the goal of providing new disease resistant cultivars the USDA-ARS and Mars, Inc. have developed a marker assisted selection (MAS) program. Quantitative trait loci have been identified for resistance to WB, FP, and BP. The potential usefulness of these markers in identifying resistant individuals has been confirmed in an experimental F(1) family in Ecuador.     

Effect of reducing dietary mineral content on growth performance, water intake, excreta dry matter content and blood parameters of broilers

1. The objective of this study was to investigate whether it is possible to reduce phosphorus (P) excretion by feeding a lower level of dietary P than that currently recommended, without compromising welfare, and whether this is sensitive to the level of dietary calcium (Ca). 2. A randomised complete block design was used with a total of 224 1-d-old male chicks of a commercial genotype in two batches. Chicks had a 10-d adaptation period. After this, they were moved to cages and allocated to one of 4 dietary treatments (4 and 3 birds per cage in batch 1 and 2, respectively). A standard level of Ca and P (8.3 and 6.6 g/kg, respectively) was compared with three lower levels of Ca (7.3, 6.3 and 5.3 g/kg) all at the same reduced level of P (5.5 g/kg). Records were made of live weight of birds on an individual basis and feed and water consumption on a cage basis. Every 7 d, the dry matter (DM) content of a sample of mixed excreta from each cage was measured. Birds were slaughtered and samples taken for analysis of plasma mineral content, retention of N, Ca and P and tibia bone strength. 3. The initial reduction in dietary mineral level did not adversely affect performance or bone strength. However, decreasing dietary Ca level below 7.3 g/kg, at constant P, led to reduced feed consumption and bone strength. Dietary treatment had no significant overall effect on water intake, water : feed ratio, excreta DM content, Ca and P retention or metabolisability of DM. There was no significant correlation between mean plasma Ca or P level and DM content of rectal digesta. 4. In conclusion, reducing dietary P from 6.6 to 5.5 g/kg to reduce potential environmental impact of broiler production had an adverse effect on bird welfare when the level of Ca was reduced below 7.3 g/kg, as a result of decreased feed intake in the early growth period and reduced skeletal strength.     

Comparison of larval thermal maxima between <Emphasis Type="Italic">Fundulus heteroclitus</Emphasis> and <Emphasis Type="Italic">F. grandis</Emphasis>

Fundulus heteroclitus and F. grandis are resident salt marsh fishes that overlap in distribution over a narrow range in northeastern Florida. The objective of the present study was to examine whether the limits of the species’ ranges could be explained by differences in thermal tolerance. Two populations of each species were collected and then spawned in the laboratory, and 9-day-old larvae were used for critical thermal maxima trials. Mean LOE temperatures of larvae ranged from 43.04 to 43.65°C and showed little difference between species. Therefore, differences in high temperatures experienced cannot account for the differences of the distributions of the two species. Condition-specific competition may play a greater role in determining the observed range of the two species.     

Estimation of the effect of lead and cadmium ions on fluctuating asymmetry in leaves of the common bean (Phaseolus vulgaris L.)

The effect of lead and cadmium ions on the fluctuating asymmetry of the side leaflets’ central veins of the common bean (Phaseolus vulgaris L.) was estimated. The impact of heavy metals on the parameter with the lead or cadmium content in the ground in the concentration of 650 mg/kg or 10 mg/kg respectively was not revealed.     

Influence of variety on the within-plant distribution of cassava green spider mite (Acari: Tetranychidae), and leaf anatomical characteristics and chemical components in relation to varietal resistance

The within-plant distribution of the cassava green spider mite, Mononychellus tanajoa Bondar, and the anatomical characteristics and the chemical components relating to varietal resistance of cassava, were studied using 11 cassava genotypes with varying levels of resistance for two dry seasons and one wet season. The results show that M. tanajoa aggregates on the top leaves of cassava at low levels of resistance as compared with a more even within-plant distribution at higher levels of resistance. Thus, for accurate sampling of mite populations, it might be important to consider young and old leaves, not just the young leaves, in fields containing resistant and susceptible cassava genotypes. Correlations between the anatomical characteristics and mite population density and damage scores were not consistent across months, either within or over seasons. This suggests that leaf anatomical characteristics may not be important in the varietal resistance of cassava to M. tanajoa. During the dry season, mite population density was positively correlated with leaf nitrogen, potassium and phosphorus and negatively correlated with leaf calcium and fat. Only calcium was negatively associated with mite damage at the peak of the dry season (January 1993 and 1994). Breeding cassava genotypes with high levels of leaf calcium and fat, and low levels of leaf nitrogen, potassium and phosphorus, may improve the level of resistance to M. tanajoa.     

Contamination of soil with Toxocara eggs in urban (Prague) and rural areas in the Czech Republic

Contamination of soil with feline and canine ascarid eggs in public parks, backyards and sand pits in Prague, Czech Republic was investigated in this work. Soil samples from shelters and rural areas were also collected. The comparison of soil from different areas (urban, rural, backyards and shelters) exhibited significant difference (chi(2)=32.16, d.f.=3 and p<0.0001). The highest rate of contamination (45%) was found in backyards inhabited by feral cats. The eggs of Toxocara spp. were found in 20.4% of parks, 10% of shelters and 5% of rural samples. Mean egg density per sample from Prague parks was 6.2 eggs/100g of soil. In 126 composite samples from children's and pits, the prevalence of Toxocara eggs was 11.90%. The number of eggs in positive samples varied from 2 to 22 (per 100g). A high proportion (46.9%) of eggs was fully embryonated. There was no difference between the sand pits with or without formal exclusion of dogs (chi(2)=0.6, d.f.=1 and p<0.0001).     

Effect of liming on extractable Zn, Cu, Fe and Mn in selected Scottish soils

Ten naturally acidic Scottish soils have been limed with CaCO₃ at 0,0.25, 0.50, 0.75, 1.00 and 1.25 times the recommended lime requirement, and then subjected to three cycles of alternate wetting to field capacity at 20°C for 1 month and drying for 1 month. The Zn, Cu, Fe and Mn extracted by DTPA solution, both at pH 7.3 and also after adjustment to match the final soil pH, were measured by flame AAS. The same elements were determined in ammonium acetate extracts, for extractants buffered at pH 4.8, pH 7.0 or at the final soil pH. The effect of extractant pH upon the amounts of trace elements removed is discussed for the two extractants, with particular reference to Zn. The influence of soil pH upon the amounts of trace elements extracted is also considered. There appears to be a distinct relationship between rate of decrease of DTPA-extractable Fe with increasing soil pH and the effect of pH upon DTPA-extractable Zn, high rates of decrease of extractable Fe being associated with a more continuous decline in extractable Zn with increasing soil pH. Possible reasons for this relationship are discussed, in the light of an experiment conducted to examine the effect of Fe and A1 on loss of Zn from solution at high pH. DTPA-extractable Cu varied little with increasing soil pH.     

Genotyping Common Bean for the Potyvirus Resistance Alleles I and bc-1(2) with a Multiplex Real-Time Polymerase Chain Reaction Assay

ABSTRACT A multiplex real-time polymerase chain reaction (PCR) assay was developed to simultaneously genotype plants for the I and bc-1(2) alleles, which condition resistance in beans to Bean common mosaic virus and Bean common mosaic necrosis virus. A segregating F(2) population was derived from the cross between pinto bean breeding line P94207-189A (bc-1 bc-1 I I) and Olathe (bc-12 bc-1(2) i i). Real-time PCR assays were developed that were specific for each allele, and a multiplex PCR reaction could unambiguously assign F(2) plants to one of nine genotypes. Remnant F(1) plants were used as a comparative reference sample. PCR results among this sample fit a normal distribution for both real-time PCR assays, and 99% probability distributions were determined for heterozygotes. F(2) plants were genotyped based on results relative to the probability distributions for heterozygotes. F(2) plants also were genotyped for the I and bc-1(2) alleles by performing F(3) family progeny tests for virus resistance. Agreement between the two methods was 100% (198/198) for the bc-1(2) allele, and 92.4% (183/198) for the I allele. Erroneous genotyping was due to recombination between the amplicon and the I allele. Realtime PCR assays provide a robust method for genotyping seedlings and, in some cases, may eliminate the need for progeny testing.     

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