Abundance and distribution of the white shark in the Mediterranean Sea

Conservation of apex predators is a key challenge both in marine and terrestrial ecosystems. The white shark is a rare but persistent inhabitant of the Mediterranean Sea and it is currently assessed as “critically endangered” in the region. However, the population trends and dynamics of this species in the area are still unknown. Little is known about white shark distribution, habitat use and population abundance trends, aspects that are critical for conservation and management. In this study, we built the most comprehensive database of white shark occurrence records in the region. We collected 773 different records from different sources and used them to characterize the spatial and temporal patterns of abundance of Mediterranean white sharks between 1860 and 2016. We analysed these data by using generalized additive models and used spatially disaggregated information on human population abundance as a proxy of observation effort. Our results suggest a complex trajectory of population change characterized by a historical increase and a more recent reduction (61%, range 58%–72%) since the second half of the 20th century. In particular, analyses reveal a 52% (range 37%–88%) to 96% (range 92%–100%) overall decline in different Mediterranean sectors and a contraction in spatial distribution. Here, we provide the first reconstruction of abundance trends and offer new hypotheses regarding the drivers of change of white sharks in the Mediterranean. Our approach can be broadly applied to data‐poor contexts to reconstruct change and inform the conservation of endangered top predators in the Mediterranean Sea and other intensely used marine regions.     

Digestibility of feed ingredients for the striped surubim Pseudoplatystoma reticulatum

Knowledge on apparent digestibility coefficients (ADC) is necessary to maximize the feed efficiency, thus lessening dietary nutrient and energy losses. This study tasks the determination of apparent digestibility of selected feedstuff to striped surubim Pseudoplatystoma reticulatum, a carnivorous, South American catfish of economic importance for fisheries and fish culture alike. Juvenile striped surubim (82.4 ± 17.7 g and 23.0 ± 1.6 cm) was distributed in 21 cylindrical, plastic cages (80 L), housed in seven 1000 L feeding tanks under constant water flow and aeration and conditioned to a two daily meals (20h00m and 22h00m) feeding regimen on a practical, reference diet (RD) (460.0 g kg^?1 crude protein (CP); 19.23 kJ g^?1 gross energy (GE)]. Test diets were obtained by adding of 1 g kg^?1 chromium III oxide and 300 g kg^?1 of one the following feedstuffs: fish meal (FM), meat and bone meal (MBM), poultry by‐product meal, feather meal, blood meal, soybean meal, wheat bran, corn and corn gluten meal to the RD. After the last daily meal, fish were transferred to cylindrical, conical‐bottomed aquaria (200 L) under aeration and continuous water exchange, coupled to refrigerated plastic bottles for faeces collection by sedimentation. Best ADC of protein (99.36%) and energy (86.25%) were recorded for poultry by‐product meal and MBM, respectively, which are thus deemed ideal surrogate feedstuffs to FM in the formulation and processing of diets for striped surubim.     

Absorption and Synthesis of Immunoglobulins G in Newborn Calves

Newborn calves (n=19) got 4.5 liters of pooled colostrum within three feedings in the first 14 hours post natum (p.n.). The immunoglobulin G1 (IgG1) and IgG2 concentrations in the colostrum pool were 54.9 mg/ml and 4.2 mg/ml. The precolostral serum IgG concentrations in calves were 0.15 mg/ml (IgG1; SD 0.24) and 0.06 mg/ml (IgG2; SD 0.14). The highest serum IgG levels p.n. were measured 12 hours after the first colostrum feeding (9.3 mg IgG1/ml (SD 4.0), 0.8 mg IgG1/ml (SD 1.0). Thereafter, the mean IgG1 level was reduced continuously to the significant lowest concentration of 4.9 mg/ml (SD 2.3) at day 28 p.n. and then increased continuously to the significant highest concentration of 9.0 mg/ml (SD 4.8) on day 77 p.n. The mean concentration of IgG2 was lowest on day 11 p.n. (0.5 mg/ml; SD 0.4) and highest on day 77 p.n. (1.2 mg/ml; SD 0.6).
In blood from 198 calves, housed in Germany and sampled between day 4 and 6 p.n., the IgG concentration averaged 4.9 mg/ml serum (SD 3.3). From 93 dams of these calves a sample of the first colostrum could be obtained showing a mean concentration of 22.0 mg IgG/ml (SD 11.0). IgG levels in the colostrum and in the serum showed a correlation of r=0.37.
In Kenia IgG levels of three week old calves from two farms were measured. The calves were always with mother for the first 24 hours. The mean serum IgG concentrations of the calves were 22.5 mg IgG/ml (n=7, SD 6.8) and 15.2 mg IgG/ml (n=15; SD 6.3). Comparing to the serum IgG levels found in calves of our studies in Germany there were significant differences.     

Natural food intake by juvenile Arapaima gigas during the grow‐out phase in earthen ponds

In carnivorous fish species, zooplankton is one of the main food items in the early life stages and some fish species continue feeding on such food items further along the life stages even in the farming environment. In this study, the intake of natural food items was assessed in juvenile pirarucu Arapaima gigas reared in earthen ponds. Juvenile pirarucu (12.2 ± 4.32 g and 12.1 ± 1.13 cm) were stocked in fertilized earthen ponds (240 m²). For the analysis of the fish stomach content and plankton in the pond water, the fish and pond water were sampled weekly for 75 days and biweekly until the fish reached a mean weight of 750 g. Although artificial feed was used, pirarucu also ingested the natural food available in the pond water. Among the zooplankton, pirarucu demonstrated feeding preference for cladocerans despite the abundance of rotifers and copepods. Cladocerans were present in more than 80% of the stomach contents of fish up to 300 g and in 65%, 45% and 17% of fish of 301–500 g, 501–700 g and 701–900 g respectively. Copepods were present only in fish up to 500 g at low abundance. High ingestion of insects and plant material was observed in the stomach content of fish of all size classes. The results demonstrate that juvenile pirarucu ingest natural food available in the farming pond and suggests that the adoption of pond fertilization practices may have positive effects on fish growth performance.     

Efficient Transgene Expression in IVF and Parthenogenetic Bovine Embryos by Intracytoplasmic Injection of DNA–Liposome Complexes

Transgenic animals constitute an important tool with many biotechnological applications. Although there have been advances in this field, we propose a novel method that may greatly increase the efficiency of transgenic animal production and thereby its application. This new technique consists of intracytoplasmic injection of liposomes, in bovine oocytes and zygotes, to introduce exogenous DNA. In the first experiment, we evaluated embryo development and EGFP expression in In Vitro Fertilization (IVF) embryos injected with different concentrations of exogenous DNA–liposome complexes (0.5, 5, 50, 500 ng pCX‐EGFP/μl). The highest EGFP‐embryos rates were obtained using 500 ng pCX‐EGFP/μl. In the second experiment, we evaluated embryo development and EGFP expression following the injection of DNA–liposome complexes into pre‐fertilized oocytes and presumptive zygotes, 16 and 24 h post‐fertilization. Approximately 70% of the cleaved embryos and 50% of the blastocysts expressed EGFP, when egfp–liposome was injected 16 h post‐fertilization. The percentages of positive embryos for the 24‐h post‐fertilization and pre‐fertilization groups were 30.1 and 6.3, respectively. Blastocysts that developed from injected zygotes were analysed by PCR, confirming the presence of transgene in all embryos. Finally, we examined the embryo development and EGFP expression of parthenogenetic embryos that resulted from the injection of egfp–liposome complexes into pre‐activated oocytes, and 3 and 11 h post‐activated oocytes. The group with the highest expression rate (48.4%) was the one injected 3 h post‐activation. In summary, this study reports the efficient, reproducible and fast production of IVF and parthenogenetic embryos expressing EGFP, by the intracytoplasmic injection of liposomes to introduce the foreign DNA.     

Fingerprinting Hydrocarbons in a Contaminated Soil from an Italian Natural Reserve and Assessment of the Performance of a Low-Impact Bioremediation Approach

An environmentally friendly procedure suitable to restore a protected area was evaluated at laboratory scale. Soil contaminated by high molecular weight (C > 10) aliphatic hydrocarbons and by chromium was withdrawn from the study site and a qualitative study of soil hydrocarbon components was first performed in order to assess the potential source of contamination. To this aim, a number of characteristic diagnostic ratios of hydrocarbon components were derived by processing chromatographic data, and were used as indicators for distinguishing anthropogenic from natural hydrocarbons. Then, the efficiency of landfarming for soil remediation was tested by comparing the effect of a few selected amendments and by monitoring the fate of chromium. Soil microbial abundance and activity were also evaluated. Results showed that soil hydrocarbons were mainly of anthropogenic origin and land treatment allowed effective degradation by native microbial populations even in the absence of amendments. The investigated procedures had no effect on the mobilisation of chromium that remained in its stable form of Cr(III). Conventional land treatment may therefore be an effective and safe procedure for the removal of hydrocarbons even in the presence of chromium, and may be applied to areas where low-impact procedures are strictly required.     

Photopolymerization and Mass-Independent Sulfur Isotope Fractionations in Carbon Disulfide

Irradiation of gaseous carbon disulfide [CS2(g)] at 313 nanometers produces a dark brown aerosol of (CS2)x. Its thermal decomposition products include disulfur (S2), carbon monosulfide (CS), and (CS)x. The photopolymerization process is accompanied by a large mass-independent isotopic fractionation of sulfur (a 5 to 10 per mil sulfur-33 excess and a 61 to 84 per mil sulfur-36 deficit). Excess sulfur-33 has been observed in several classes of meteorites. Photochemical production of (CS2)x may be important in the origin and evolution of cosmochemical environments such as the presolar nebula, meteorites, asteroids, and planetary atmospheres.     

Peanut yield,nutrient uptake and nutrient requirements in different regions of China

Nutrient balance is essential for attaining high yield and improving profits in agricultural farming systems, and crop nutrient uptake ratio and stoichiometry can indicate crop nutrient limitations in the field. We collected a large amount of field data to study the variations in yield, nutrient uptake and nutrient stoichiometry of peanut(Arachis hypogaea L.) in Southeast China(SEC), North-central China(NCC), and Northeast China(NEC), during 1993 to 2018. Peanut pod yield gradually increased from 1993 to 2018, with average yields of 4 148, 5 138, and 4 635 kg ha–1 in SEC, NCC, and NEC, respectively. The nitrogen(N) internal efficiency(NIE, yield to N uptake ratio) was similar among the three regions, but phosphorus(P) IE(PIE, yield to P uptake ratio) changed from low to high among regions: NCCSECNEC, while potassium(K) IE(KIE, yield to K uptake ratio) portrayed a different pattern of SECNCCNEC. Based on the nutrient IE, to produce 1 Mg of pod yield, the average N, P, and K requirements of the above-ground parts of peanut were roughly 47.2, 5.1, and 25.5 kg in SEC, 44.8, 5.7, and 20.6 kg in NCC, and 44.6, 4.4, and 14.7 kg in NEC, respectively. The N/P ratio changed in the sequence NCCSECNEC, and the N/K ratio was similar in NEC and NCC, but lower in SEC. The N harvest index(HI) and KHI declined with increasing nutrient uptake across all regions under high nutrient uptake. The low PIE and N/P ratios in NCC could be explained by the high P accumulation in stover, and high KIE and N/K ratios in NEC may be attributed to the low soil K supply. The frontier analysis approach provides a practical framework and allows documentation of a decline in nutrient HI as nutrient uptake increases. Lastly, this study reveals the limitation and surplus of nutrients of peanut in different regions of China.     

Assessment of phosphorus bioavailability in cultivated Andisols from a long-term fertilization field experiment using chemical extractions and soil enzyme activities

Various chemical extraction methods have been used to evaluate soil phosphorus (P) availability in different ways, and therefore inconsistent results are often obtained. This study examined the usefulness of the resource allocation model for extracellular enzymes for evaluating P availability in soils from a more biological perspective. Potential P availability was evaluated using the Truog and Bray-2 tests, the Hedley sequential extraction procedure, and enzyme activity assessments in cultivated Andisols from a 70-year-old fertilization experiment. Both the ratio of acid phosphatase to β-D-glucosidase activities and the ratio of alkaline phosphatase to β-D-glucosidase activities showed significant negative correlations with potentially available inorganic P, suggesting that microorganisms preferentially expended resources in the form of phosphatase production rather than β-D-glucosidase production to acquire P. Additionally, crop P content had a significant negative relationship to the ratio of alkaline phosphatase to β-D-glucosidase activities. These results suggest that the resource allocation model for extracellular enzymes is useful for evaluating P availability in Andisols.     

Contribution of forest floor fractions to carbon storage and abundance patterns of arbuscular mycorrhizal fungal colonisation in a tropical montane forest

Forest floor carbon stocks, which include different components of litter, hemic and sapric materials, have not been empirically quantified in tropical montane forest, although they influence soil carbon (C) pools. To date, the contribution of arbuscular mycorrhizae in C sequestration potentials in tropical montane forests have not been clearly investigated. This study determined the amount of C stocks in the different decomposing layers of forest floor, mainly litter, hemic and sapric materials. The abundance of arbuscular mycorrhizal root colonisation differed among forest floor fractions. Forest floor was measured for depth, area density, dry mass and carbon fraction separately in Sungai Kial Forest Reserve, Pahang, Malaysia to calculate C stocks. Percentages of root colonisation in the hemic and sapric materials were investigated. The results showed that forest floor C stocks were significantly higher in hemic (5 Mg C ha^?1) and sapric (7.7 Mg C ha^?1) compared with the litter fragments (1.5 Mg C ha^?1). Mycorrhizal root colonisation was significantly higher (75%) in the toeslope compared with the summit area in the hemic materials. Segregation of forest floor layers provided greater accuracy in forest floor C stocks reporting.