Molecular characterization of potentially zoonotic isolates of Giardia duodenalis in horses

Giardia isolates from eight horses from New York State (NY), USA and two horses from Western Australia (WA) were genetically characterized at the SSU-rDNA and triose-phosphate isomerase (TPI) genes. Phylogenetic analysis of the TPI gene provided strong support for the placement of both isolates of Giardia from horses in WA and a single isolate from a horse in NY within the assemblage AI genotype of G. duodenalis. Another two isolates from horses in NY placed within the assemblage AII genotype of G. duodenalis. Phylogenetic analysis of the TPI gene also provided strong bootstrap support for the placement of four G. duodenalis isolates from horses in NY into a potentially host-specific sub-assemblage of assemblage BIV. The results of this study are consistent with previous studies showing that assemblages AI and AII of G. duodenalis provide the greatest potential zoonotic risk to humans. Horses may therefore constitute a potential source for human infection of Giardia either directly or via watersheds.     

Temperature and plant age drive downy mildew disease epidemics on oilseed <Emphasis Type="Italic">Brassica napus</Emphasis> and <Emphasis Type="Italic">B. juncea</Emphasis>

Studies were undertaken on the effects of temperature (14/10 °C and 22/17 °C day/night) and plant age (15, 23, 31 and 40 day-old-plants) on the severity of downy mildew (Hyaloperonospora parasitica) on oilseed Brassica cultivars (temperature: Brassica juncea Montara, B. napus Atomic, ATR-Hyden, Hyola 432, Hyola 450 TT, Thunder TT; plant age: B. juncea Dune, B. napus Surpass 402 and Hyola 450 TT). For temperature studies, there were significant (P?<?0.001) effects of temperature, cultivar, and cultivar x temperature interaction. On cotyledons of susceptible cultivars (B. napus Hyola 450 TT and Thunder TT), plants were symptomatic at 22/17 °C by 48 h post inoculation (hpi) and with abundant sporulation evident by 72 hpi, and with all cotyledons of B. napus Thunder TT collapsed by 7 days post inoculation (dpi). However, at 14/10 °C, there were no symptoms on the same cultivars until 5 dpi, and sporulation only observed at 7 dpi. Percent disease index values (DI%) at 22/17 °C of B. juncea Montara and B. napus ATR-Hyden, Hyola 432, Atomic, Hyola 450 TT and Thunder TT were 4.5, 49.0, 51.4, 65.8, 86.3 and 96.0, respectively, with all except B. juncea Montara having significantly lower (P?<?0.001) disease at 14/10 °C with DI% values of 2.8, 30.4, 27.9, 31.1, 44.4 and 76.4, respectively. For plant age studies, there were significant (P?<?0.001) effects of plant age, cultivar, and cultivar x plant age interaction. DI% was significantly higher at 15 compared to 40 day-old-plants (dop) across all cultivars. B. juncea Dune showed greatest resistance, particularly on 40 dop, with DI% values of 25.8, 24.6, 22.9 and 7.5, for 15, 23, 31 and 40 dop, respectively. B. napus Surpass 402 showed high susceptibility on cotyledons of 15 dop but moderate resistance on leaves of other ages, with DI% values of 59.0, 31.2, 27.1 and 26.2 for 15, 23, 31 and 40 dop, respectively. B. napus Hyola 450 TT showed very high susceptibility at the cotyledon stage on 15 dop, but some resistance on 23 dop and more so on 31 and 40 dop, with DI% values of 84.0, 41.2, 35.4 and 32.9 for 15, 23, 31 and 40 dop, respectively. Together, these findings explain for the first time why development of downy mildew epidemics on susceptible cultivars occurs early in the growing season when warmer seasonal temperatures in autumn coincide with presence of seedlings; in contrast to later in the growing season on less susceptible older plants coinciding with cooler and less favourable winter temperatures. Increasing maximum and minimum temperatures associated with climate change have likely fostered the increased severity of downy mildew over the past 15 years.     

第四纪红土发育的水稻土微团聚体特性的初步研究

赣中丘陵地区广泛分布着由第四纪红土发育的水稻土,它是重要的产粮地区,也是低产田分布较广的地区。提高低产的红壤性水稻土的肥力,一向是大家所关心的问题,各有关单位做了不少的研究。关于红壤性水稻土的结构特性及胶结物质等曾有研究^[1,9],但对结构形成具有重要意义的微团聚体的特性及其与农业措施的关系,研究较少。土壤微团聚体质和量的研究,可分别土壤肥力的高低,也可阐明輪作、耕作和施肥等措施在培肥中的作用。作者^[4,6]曾进行中性水稻土有机矿质复合体的研究,在此基础上,本文拟就红壤性水稻土中微团聚体¹⁾的特性及其与土壤肥力的关系作一初步了解,为进一步开展这方面的研究提供线索。     

The potential for combining living wall and vertical farming systems with aquaponics with special emphasis on substrates

Aquaponics is a method of food production, growing fish and vegetables in a recirculating aquaculture system. Aquaponics uses the water from the fish to feed the plants in a totally natural way and like hydroponics, aquaponics is considered to be more sustainable as more plants can be grown per square metre compared to normal agriculture. However, as is the case with normal agriculture, in aquaponics plants are grown within horizontally. In aquaponics, using the UVI system, the ratio between fish tanks:filters:plant tanks is 2:1:5 which means that the plant tanks are occupying close to half of the production space. In order to reduce the spatial requirement for plants, which would make production even more sustainable, this research investigates aspects of combining living wall and vertical farming technologies in aquaponics. It is considered that by growing the plants vertically less space would be required. In this research living wall system is investigated but the main focus is on the potentials of using various inert substrates in the living wall systems for vertical aquaponics. The results showed that a pot system performs better in terms of management of the systems. With regard to substrates, horticultural grade coconut fibre and horticultural grade mineral wool outperformed other substrates.     

Optimization of the stocking parameters for mud spiny lobster Panulirus polyphagus (Herbst, 1793) capture‐based aquaculture in tropical open sea floating net cages

Mud spiny lobsters, Panulirus polyphagus (Herbst, 1793), were reared at four different stocking sizes and stocking densities in open sea cages to evaluate their effects on growth performance. To evaluate the effect of stocking size on the growth performance, the lobsters were segregated into four different treatment groups according to size and were stocked at a density of 300 animals per cage. To evaluate the effect of stocking density on the growth performance, lobsters of 81–100 g were stocked in four different stocking densities, i.e. 16/m², 24/m², 32/m² and 40/m². The results showed that the growth rate of (60–80 g) size group, was significantly higher compared to the size groups, i.e. 101–120 g and 121–140 g comprising of larger individuals. The final body weight, though significantly higher in 81–100 g as compared to 60–80 g, the growth performance (i.e. weight gain percentage (WG %) and specific growth rate (SGR)) were not significantly different. The density‐dependent influence on growth performance was evident in this study. The WG % and SGR during 90 days’ culture period was significantly higher in 24/m² compared to other groups. This study provides crucial information about the appropriate stocking density and stocking size of lobsters at the field level, which would help to promote sustainable lobster cage farming by maximizing the production potential of the system.     

Nitrogen and Phosphorus Use Efficiency in Improved Potato (<Emphasis Type="Italic">Solanum tuberosum</Emphasis> L.) Cultivars in Southern Ethiopia

Use of nutrient efficient crop species or cultivars within species in combination with improved crop production practices offer the best option for meeting the future food requirements of growing world populations. Efficiency improvement has a key role for nutrient use and it improves both productivity of yield and minimizes risks of losses that potentially harm the environment. To improve nutrient use efficiency (NUE), one strategy is to select cultivars of crops with high NUE. Both nitrogen (N) and phosphorus (P) are among essential macronutrients commonly applied to agricultural crops to optimize yields. Evaluation of potato cultivars with high N and P efficiency is essential for sustainable production of the crop. In Ethiopia, however, little research has been done to elucidate better NUE of potato crop until recently. This study was, thus, designed to evaluate selected potato cultivars (Belete, Gudene, Jalene, Marachere and one local check) for NP use efficiency under low levels of the nutrients in Wolaita Sodo University, Ethiopia during 2014 and 2015. Factorial combination of 3 levels of each N (0, 55.5 and 111 kg N ha^?1 ) and P (0, 19.5 and 39 kg P ha^?1 ) were assigned to the main plots and the 5 cultivars to subplots of split-plot design in three replications. Efficiency indices such as agronomic efficiency, physiological efficiency and recovery efficiency were computed for combined NP nutrients. Results showed that agronomic nitrogen use efficiency, apparent phosphorus use efficiency and phosphorus use efficiencies were significantly influenced by the interaction effect of rates of NP nutrition and variety. Application of NP more than 55.5:19.5 kg ha^?1 will not beneficial due to their less or equal use and recovery efficiencies to 55.5:19.5 kg NP ha^?1. Belete was the most NP efficient variety followed by Jalene and Gudene in all efficiency indices. Therefore, Belete, Jalene and Gudene return better for NP at 55.5:19.5 kg ha^?1 for economical use of fertilizes while obtaining satisfactory yield. It can be concluded that yield response variation of the varieties was related to their differences in NP uptake and use efficiencies; and the improved potato varieties were superior to local check in using NP nutrients efficiently.     

海南西番莲茎腐病病原的分离与鉴定

为解决若干病原菌引起的西番莲茎基腐病症状类似,难从症状方面辨别病原菌的问题,采用经典方法即常规鉴定法,对引起海南省琼海市西番莲基腐的病原菌进行鉴定。配制选择性PDA、PDA、V-8、选择性V-84种培养基,对样本中的病原物进行分离、纯化,根据分离菌的各项形态特征描述和分离菌株的主要生长温度测定结果,以及有关文献提供的原理方法进行该分离菌鉴定。结果表明:①分离到1种疫霉菌菌株;②该菌株在选择性PDA、PDA、选择性V-8培养基生长的诸方面特征一样。菌落圆形均一,气生菌丝不丰富。孢子囊形态为侧梨形、柠檬形或椭圆形,基部钝圆,长×宽为24.5～44.3μm×22.8～34.5μm,冷冻后释放游动孢子,未见厚垣孢子。③菌株最低生长温度8～10℃,最适生长温度28℃,最高生长温度36～40℃。④28℃下,分离菌在V-8上日生长量为16.2mm,而在PDA上则为13.7mm。⑤该病原物疫霉菌属于[Phytophthora nicotianae Breda de Haan(parasitica Dastur)]。     

Methanotrophy-driven accumulation of organic carbon in four paddy soils of Bangladesh

Biological methane oxidation is a crucial process in the global carbon cycle that reduces methane emissions from paddy fields and natural wetlands into the atmosphere.However,soil organic carbon accumulation associated with microbial methane oxidation is poorly understood.Therefore,to investigate methane-derived carbon incorporation into soil organic matter,paddy soils originated from different parent materials(Inceptisol,Entisol,and Alfisol) were collected after rice harvesting from four major rice-producing regions in Bangladesh.Following microcosm incubation with 5%(volume/volume)¹³ CH₄,soil¹³ C-atom abundances significantly increased from background level of 1.08% to 1.88%–2.78%,leading to a net methane-derived accumulation of soil organic carbon ranging from 120 to 307 mg kg^-1.Approximately 23.6%–60.0% of the methane consumed was converted to soil organic carbon during microbial methane oxidation.The phylogeny of¹³ C-labeled pmoA(enconding the alpha subunit of the particulate methane monooxygenase) and 16 S rRNA genes further revealed that canonical α(type II) and γ(type I) Proteobacteria were active methane oxidizers.Members within the Methylobacter-and Methylosarcina-affiliated type Ia lineages dominated active methane-oxidizing communities that were responsible for the majority of methane-derived carbon accumulation in all three paddy soils,while Methylocystis-affiliated type IIa lineage was the key contributor in one paddy soil of Inceptisol origin.These results suggest that methanotroph-mediated synthesis of biomass plays an important role in soil organic matter accumulation.This study thus supports the concept that methanotrophs not only consume the greenhouse gas methane but also serve as a key biotic factor in maintaining soil fertility.     

cDNA cloning and complete primary structures of myosin heavy chains from brushtooth lizardfish Saurida undosquamis and wanieso lizardfish S. wanieso fast skeletal muscles

ABSTRACT:   The complete cDNA sequences encoding predominant types of myosin heavy chain (MYH) in the fast skeletal muscle were determined for brushtooth lizardfish Saurida undosquamis and wanieso lizardfish S. wanieso , which are used as materials for preparing high-quality surimi-based products. The cDNA consisted of 5973 and 5987 bp, respectively, and both encompassed an open reading frame encoding a polypeptide of 1936 amino acid residues. Brushtooth and wanieso lizardfish MYH showed the amino acid sequence identity of 92–93% to white croaker MYH, which was higher than that of 90% to walleye pollack MYH. The putative binding sites for ATP, actin, and regulatory and essential light chains in the subfragment-1 region of brushtooth lizardfish MYH exhibited a high identity with white croaker counterparts as well as the sequences of subfragment-2 and light meromyosin. In contrast, phylogenetic tree, constructed by the neighbor-joining method based on mitochondrial 16S rRNA gene, revealed that the two lizardfish species formed a cluster with walleye pollack, which was paraphyletic with white croaker. Therefore, a good reputation for lizardfish and white croaker to have a high thermal-gel forming ability seemed to be reflected by MYH rather than biological similarity as revealed by the mitochondrial 16S rRNA gene.