Phenotypic and genetic parameter estimates for reproductive traits in Zandi sheep

This study reports on the phenotypic and genetic (co)variance components for reproductive traits in Zandi sheep, using between 1,859 and 2,588 records obtained from 577 ewes. The data were collected from the Khojir Breeding Station of Zandi sheep in Tehran, Iran from 1994 to 2008. The basic traits were litter size at birth (LSB), litter size at weaning (LSW), litter mean weight per lamb born (LMWLB), and litter mean weight per lamb weaned (LMWLW), and the composite traits were total litter weight at birth (TLWB) and total litter weight at weaning (TLWW). Genetic analyses were carried out using the restricted maximum likelihood method that was explored by fitting the additive direct genetic effects and permanent environmental effects of the ewes as random effects and the ewe age at lambing and lambing year as fixed effects for all of the investigated traits. Akaike’s information criterion was used to choose the most appropriate model. LSB, LSW, LMWLB, LMWLW, TLWB, and TLWW direct heritability estimates were 0.07, 0.05, 0.12, 0.10, 0.08, and 0.14, respectively. The estimated fractions of variance due to the permanent environmental effects of the ewe ranged from 0.03 for LMWLB to 0.08 for LMWLW and TLWW. Corresponding repeatability estimates ranged from 0.10 for LSW to 0.22 for TLWW. Direct genetic correlations varied from ?0.61 for LSB–LMWLB to 0.88 for LSB–LSW and LSB–TLWB. Results indicate that genetic change depends not only on the heritability of traits, but also on the observed phenotypic variation; therefore, improvement of non-genetic factors should be included in the breeding programs.     

Effect of soil matric water potentials on germination of ascospores of Monosporascus cannonballus and colonization of melon roots by zoospores of Olpidium bornovanus

Results document, for the first time, the role of soil moisture on a unique, tripartite, host-specific rhizosphere interaction (i.e., Cucumis melo-Monosporascus cannonballus-Olpidium bornovanus). Specifically, colonization of cantaloupe roots by zoospores of O. bornovanus and germination of ascospores of M. cannonballus were highest at a soil matric potential of ?0.001 MPa but significantly inhibited at a matric potential of only ?0.01 MPa. Matric water potentials of ?0.01 MPa or drier are characteristically inhibitory to the motility of zoosporic microbes but not hyphal growth of filamentous fungi like M. cannonballus. These results support our previous conclusion that germination of ascospores of M. cannonballus, a destructive root pathogen of cantaloupe is mediated by O. bornovanus, an obligate, zoosporic fungus.     

Separation of Ag(I) Ions from Lepidium draba L. Plant and Water and Standard Samples by Carrier Element-Free Coprecipitation Method Prior to their Flame Atomic Absorption Spectrometric Determination

In this work, silver iodide (Ag(I)) ions were separated via the carrier element-free coprecipitation (CEFC) method using an organic coprecipitating agent, 1,6-diamino-4-(4-chlornphenyl)-2-oxo-1,2-dihydropyridine-3,5-dicarbonitrile [DCODD] prior to its determination by ?ame atomic absorption spectrometry (FAAS). Analytical parameters including pH of aqueous solution, amount of DCODD, standing time, centrifugation rate and time, and sample volume were studied and optimized. Under the best experimental conditions, it was found that extraction can be performed from the sample volume of 500.0 for silver ion (preconcentration factor of 100.0). Linearity was maintained between 0.006 and 1.50 µg.mL^?1 for silver. Detection limit for silver based on 3Sb was 1.60 ng.mL^?1. The relative standard deviation of eight replicate measurements of 0.20 µg.mL^?1of silver was 2.10%. Finally, the developed method was successfully applied to extraction and determination of the silver ions in the Lepidium draba L plant, water and standard samples and satisfactory results were obtained.     

Effects of freeze and cold stress on certain physiological and biochemical traits in sensitive and tolerant barley (Hordeum vulgare) genotypes

An experiment was performed as a split-plot design based on a randomized complete block (RCB) with three replicates. The aim was to explore physiological traits, catalase (CAT) and peroxidase (POD) activity associated with cold and freeze stress in four barley genotypes (two stress-tolerant genotypes and two sensitive genotypes). The genotypes were regarded as sub-plots and five temperature levels (namely 20, 4, 0, ?4, ?8°C) as main plots. The results revealed that the hydrogen peroxide (H₂O₂) and malondialdehyde (MDA) content increased through freeze and cold stress from 20 to 4°C. This increase was more in the sensitive genotypes than in the tolerant ones. Subsequent to the increase in lipid peroxidation, the membrane stability index (MSI) decreased, thereby increasing the electrolyte leakage. The sensitive genotypes demonstrated greater reduction in the studied parameters. Upon the increase in the H₂O₂ content, the antioxidant enzymes CAT and POD also increased in order to collect and prevent H₂O₂ from damaging the cell and the plant. Compared with the sensitive ones, the tolerant genotypes indicated more increase in the enzymes. The H₂O₂ and MDA content decreased from ?4 to ?8°C, which could be due to intracellular freezing in the sensitive genotypes, but due to the detoxifying of the antioxidant enzymes in the tolerant genotypes. Compared with the POD content, the increase in the CAT content through cold stress was more, which could mean that it was possibly CAT which acted as the main inhibitor of H₂O₂ in cold stress in the barley plant.     

Soil microbial response to tillage systems and fertilization in a sunflower rhizosphere

Tillage systems and fertilization have important effects on soil microorganism activity. Information regarding the simultaneous evaluation of long-term tillage and fertilization on soil microbial traits in sunflower fields is not available. Therefore, this study was conducted to determine the best tillage and fertilization system for soil microbial parameters. The experimental design was a split plot based on a randomized complete block design with three replications. Main plots consisted of the long-term tillage systems (1999–2011) including: no tillage (NT), minimum tillage (MT) and conventional tillage (CT). Six methods of fertilization, including farmyard manure (N1), compost (N2), chemical fertilizers (N3), farmyard manure + compost (N4); farmyard manure + compost + chemical fertilizers (N5), and control (N6) were arranged in subplots. Results showed that the highest amount of microbial biomass was observed in treatment NTN4. The highest and lowest values of enzyme activities (acid, alkaline phosphatase, urease, dehydrogenase and protease) were found in organic fertilizers + NT and chemical fertilizers + CT plots, respectively. Highest basal and induced respiration values were found for NTN4 treatment. Correlation coefficients between enzyme activity, respiration and microbial biomass carbon were significant.     

Enhanced colonization and pathogenicity of Erwinia amylovora strains transformed with the near‐ubiquitous pEA29 plasmid on pear and apple

Three plasmid‐free strains of Erwinia amylovora, the causal agent of fire blight disease of pome trees, one from Iran, one from Egypt and one from Spain, were transformed with the near‐ubiquitous nonconjugative pEA29 plasmid from a wild‐type strain and characterized. The plasmid‐deficient strains were levan‐ and slime‐positive, motile, chemotaxis‐positive, induced HR on Nicotiana tabacum var. xanthi but produced several‐fold less amylovoran and were weakly pathogenic on pear slices and apple seedlings compared to plasmid‐bearing wild‐type strains. When inoculated onto wounded young apple (cv. Royal Gala) leaves, the plasmid‐free strains labelled with green fluorescent protein gene (gfp) were mainly restricted to the inoculation site at the leaf tips, in contrast to the plasmid‐carrying wild‐type strains that moved into the midrib xylem vessel and colonized the adjacent parenchyma cells. Upon introduction of the transposon‐labelled pEA29 plasmid, amylovoran production, degree of oozing and tissue necrosis on pear slices were significantly elevated in all three strains, whilst the levels of levan and levansucrase declined. Only the strains from Iran and Egypt gained the ability to invade and colonize the young apple leaves following the introduction of pEA29. It is concluded that acquisition of the nonconjugative near‐ubiquitous plasmid may not necessarily confer increasing pathogenicity in all bacterial strains.     

Tillage effects on soil properties and wheat cultivars traits

Information regarding the evaluation of tillage effects on soil properties and rainfed wheat (Triticum aestivum L.) cultivars of Iranian fields is not available. Therefore, this research was conducted in Sanandaj (west of Iran) using a randomized complete block design in a split-plot arrangement. Three types of tillage including conventional tillage (moldboard plow to soil depth of 30 cm plus disk harrow twice), minimum tillage (chisel plow to soil depth of 15 cm plus disk harrow once) and no-tillage are assigned to the main plots. Wheat cultivars (Sardari and Azar2) were randomly distributed within the subplots in each tillage system. Results showed that the greatest bulk density and cone index were found in the minimum tillage and no tillage systems. The highest rate of grain yield was obtained in the minimum tillage system. The grain yield of Sardari cultivar (1624.1 kg ha^?1) was significantly greater than that of Azar2 (1572 kg ha^?1). Minimum tillage improved soil physical properties and wheat growth compared with the other tillage systems. No tillage increased microbial biomass carbon and bacteria number in soil compared with the other tillage systems. We conclude that using minimum tillage for Sardari cultivar will be more effective compared with other treatments.     

Assessing geopedological soil mapping approach by statistical and geostatistical methods: A case study in the Borujen region,Central Iran

Geopedology, using geomorphologic and supervised classification bases, has been proposed as a soil surveying method. It undertakes a systematic approach to map soilscapes. This approach tries to reduce the budget of accomplishing soil surveys as well as increasing the purity of mapping units. But to what extent it has been succeeded is the question. The main objective of this research was to validate the geopedological mapping methodology by statistical and geostatistical methods in the Borujen region, Central Iran. After a primary interpretation of the study area on air photos (1:20 000 scale), 94 pedons were excavated on a 125 m square sampling grid in the sample area for geostatistical studies. To achieve the statistical aims, a geomorphic unit which encompassed the maximum surface of the sample area (and also the study area) was selected and the biggest delineation of this unit with 19 pedons was considered. The credibility of generalizing the results of the geopedological approach for the studied unit was tested by comparison with 15 pedons in a similar unit outside the sample area, named the validation area. Properties of the soils, including percentage of clay, rock fragments (2–75 mm) and total carbonates in the soil family control section, percentage of organic matter in the A horizon and its thickness, were selected for statistical and geostatistical analyses. Univariate and multivariate statistical analyses obtained from the units in the sample and the validation areas, showed that the means of soil variables were similar. A high difference between A horizon thickness variances in the sample area and the validation area affected the significance of the variation test in the univariate and multivariate results. Our study demonstrated that, when comparing the same factors from sample and validation areas, the spatial distribution and spatial dependency level of soil attributes were different. Therefore, although the geopedological approach tries to distinguish more homogeneous soil mapping units, it is still not able to fully define and represent the real variability of soil properties and show the chaotic behavior or nature of the soils. We recommend further investigations on different techniques of stratifying the landscape in order to better analyze and understand the soil-forming processes and the nature of soil variability and to improve sampling and mapping approaches. We suggest that the additional determination of the phases of landforms and phases of soil series will improve mapping in the future.     

Distribution of Cr,Ni and Co in soils and rocks of Neyriz area (Iran): the influence of ophiolitic formations

Neyriz area, on south of Neyriz ophiolite complex, is one of the most important areas in fruit production. However, no study has been yet performed to assess the contamination status of soils in this region. The objective of the present study was to explore soil pollution by Cr, Ni and Co. Three landforms (ophiolite hills, alluvial fan and playa) were selected along a transect. Seven pedons were excavated and soil and rock samples were obtained. The total concentration of Cr, Ni and Co, Enrichment Factor (EF) and Geo-accumulation index (I_geo) were determined. Results showed that soils over ophiolite hills and alluvial fan were extremely polluted by Cr and Ni (I_geo=3–6). The EF Index confirmed that heavy metals originated from ophiolite rocks in the region. Both indices showed a descending trend from ophiolite hills to playa that related to deposit transportation processes during landforms evolution. It was also observed a decreasing vertical trend in metal contents in the soils over alluvial fan which can be attributed to the long-time irrigation and plant uptake as affected by land use. Further investigation is needed to understand the contamination status of ground-water and orchards of the region to achieve sustainable management.     

Magnetic Solid-Phase Extraction Based on Modified Iron Oxide Nanoparticles for the Preconcentration of Ultra-Trace Amounts of Copper Ions in the Environmental and Plant Samples and its Determination Using FAAS

In the present work, magnetic iron oxide nanoparticles (MIONPs) coated with sodium dodecyl sulfate (SDS) and modified with 1-(2-pyridylazo)-2-naphthol (PAN) as a new nanoparticle were prepared and used as an adsorbent for the extraction and preconcentration of copper ions. After adsorption, copper ions were desorbed with nitric acid (HNO₃), followed by determination with flame atomic absorption spectrometry (FAAS). The extraction conditions0. were investigated systematically. The linear range 3.0–500.0 ng mL^?1 and the detection limit of 0.6 ng mL^?1 were obtained. The relative standard deviation (RSD) of the method for seven replicate determinations of 0.1 µg mL^?1 of Cu(II) was 2.2%. The method was applied for the determination of Cu(II) in different water samples with good trueness. The accuracy was also evaluated through analyses of a certified reference material (CRM TMDW-500).