QTL identification of yield-related traits and their association with flowering and maturity in soybean

Two soybean recombinant inbred line populations, Jinpumkong 2 × SS2-2 (J × S) and Iksannamulkong × SS2-2 (I x S) showed population-specific quantitative trait loci (QTLs) for days to flowering (DF) and days to maturity (DM) and these were closely correlated within population. In the present study, we identified QTLs for six yield-related traits with simple sequence repeat markers, and biological correlations between flowering traits and yield-related traits. The yield-related traits included plant height (PH), node numbers of main stem (NNMS), pod numbers per plant (PNPP), seed numbers per pod (SNPP), 100-seed weight (SW), and seed yield per plant (SYPP). Eighteen QTLs for six yield-related traits were detected on nine chromosomes (Chrs), containing four QTLs for PH, two for NNMS, two for PNPP, three for SNPP, five for SW, and two for SYPP. Two highly significant QTLs for PH and NNMS were identified on Chr 6 (LG C2) in both populations where the major flowering gene, E1, and two DF and DM QTLs were located. One other PNPP QTL was also located on this region, explaining 12.9% of phenotypic variation. Other QTLs for yield-related traits showed population-specificity. Two significant SYPP QTLs potentially related with QTLs for SNPP and PNPP were found on the same loci of Chrs 8 (Satt390) and 10 (Sat_108). Also, highly significant positive phenotypic correlations (P < 0.01) were found between DF with PH, NNMS, PNPP, and SYPP in both populations, while flowering was negatively correlated with SNPP and SW in the J × S (P < 0.05) and I × S (P < 0.01) populations. Similar results were also shown between DM and yield-related traits, except for one SW. These QTLs identified may be useful for marker-assisted selection by soybean breeders.     

Varietal difference in physicochemical properties of pigmented rice varieties

The physicochemical properties of pigmented (Midorimochi, Jeokjinjubyeo, and Heukmichalbyeo) and non-pigmented (Hwayoungbyeo) rice varieties were investigated. Starch from non-pigmented rice consisted mainly of large polyhedral granules that were more loosely packed than those of the non-pigmented sample. Pigmented rice showed higher linoleic acid content (36–40%) and hydrolysis rate (63–79%) but lower oleic acid content (35–39%), blue value (0.05–0.17), and viscosity values than the non-pigmented one. Significantly higher mineral content, blue value, and pasting and viscosity values were observed in the Jeokjinjubyeo sample compared to those of the other pigmented rice samples. The Midorimochi variety, on the other hand, exhibited the highest total amino acid (816.82 ng mg⁻¹) and sugar (0.15–3.35 μg g⁻¹) contents and the lowest pasting and viscosity values. No substantial difference in the X-ray diffraction pattern was observed among the samples. Results of this study could serve as baseline information for the quality evaluation of three pigmented rice cultivars and provide a better understanding of their potential uses and food industry applications.     

Modelling scenarios to identify a combined sediment-water management strategy for the large reservoirs of the Tuyamuyun hydro-complex

This paper introduces a combined modelling approach using a simple water budget model (THC-model) and a 3D reservoir sedimentation model (MOHID Water) to adapt reservoir operation and visualise their effects on the sediment deposition. By this, an effective combined sediment-water management can be identified under semi-arid conditions for dry, median and wet years. Results are presented for the reservoirs of the Tuyamuyun Hydro-Complex (THC), which is located in the lower Amu Darya River. The determination of the actual and usable reservoir storage volume shows that siltation will significantly adversely affect the ability of the in-stream Channel Reservoir to regulate seasonal demand for both irrigation and municipal water supply. However, modelling scenarios results confirm the effectiveness of adapted operation rules for the THC reservoirs and show that the operation of large dams could be modified according to a combined sediment-water management. The experience gained during this study emphasizes the fact that the concept of a combined reservoir management of sediments as well as water can be an efficient measure to improve the sustainable long-term use of reservoirs and to contribute towards a safe water supply in water crisis regions.     

The illusion of control: industrialized agriculture,nature, and food safety

I explore the role of nature in the agrifood system and how attempts to fit food production into a large-scale manufacturing model has lead to widespread outbreaks of food borne illness. I illustrate how industrial processing of leafy greens is related to the outbreak of E. coli 0157:H7 associated with spinach in the fall of 2006. I also use this example to show how industry attempts to create the illusion of control while failing to address weaknesses in current processing systems. The leafy greens industry has focused efforts on sterilizing the growing environment and adopting new technologies, while neglecting to change the concentrated structure of processing systems. Repeated breakdowns in these systems illustrate a widening fault line between attempted and failed control of nature in industrial food production.

Improved remote sensing detection of wheat powdery mildew using dual-green vegetation indices

In this study, we investigated the possibility of using ground-based remote sensing technology to estimate powdery mildew disease severity in winter wheat. Using artificially inoculated fields, potted plants, and disease nursery tests, we measured the powdery mildew canopy spectra of varieties of wheat at different levels of incidence and growth stages to investigate the disease severity. The results showed that the powdery mildew sensitive bands were between 580 and 710 nm. The best two-band vegetation index that correlated with wheat powdery mildew between 400 and 1000 nm wavelength were the normalized spectrum 570–590 and 536–566 nm bands for the ratio index, and 568–592 and 528–570 nm for the normalized difference index. The coefficients of determination (R ²) for both were almost the same. The optimum dual-green vegetation index was constructed based on a calculation of the ratio and normalized difference between the normalized spectrum within the two green bands. The coefficients of determination (R ²) of DGSR (584, 550) (dual-green simple ratio) and DGND (584, 550) (dual-green normalized difference) were both 0.845. The inverse models of disease severity performed well in the test process at the canopy scale, and indicated that, compared with the traditional vegetation indices of Lwidth, mND705, ND (SDr, SDb), SIPI, and GNDVI, the novel dual-green indices greatly improved the remote sensing detection of wheat powdery mildew disease. Following these results, combined disease severity and canopy spectra were shown to be of enormous value when applied to the accurate monitoring, prevention, and control of crop diseases.     

Conserving copalillo: The creation of sustainable Oaxacan wood carvings

Most accounts of the effect of the global marketplace on deforestation in Africa, Asia, and Latin America emphasize the demand for timber used in industrial processes and the conversion of tropical forests to pastures for beef cattle. In recent years, numerous scholars and policymakers have suggested that developing a market for non-timber forest products (NTFPs) might slow the pace of habitat destruction. Although increased demand for NTFPs rarely results in massive deforestation, the depletion of the raw materials needed to make particular products is common. Many rural households in the Mexican state of Oaxaca have prospered over the past three decades through the sale of brightly-painted, whimsical wood carvings (alebrijes) to international tourists and the owners of ethnic arts shops in the United States, Canada, and Europe. This paper examines a promising project aimed at providing Oaxacan alebrije-makers with a reliable, legal, and sustainable supply of wood. The ecologists, artisans, merchants, and forest owners involved in the project face formidable obstacles. Gaining permission to harvest wood from land belonging to Oaxacan communities requires the negotiation of a complex social, legal, economic, and political landscape. Artisans’ decisions about where to obtain wood rest largely on price, quality, and reliability of the supplier; they are willing to pay a premium for ecologically sustainable wood only if the additional cost can be passed on to consumers. Nonetheless, a group of carvers has begun to buy sustainably harvested wood. This arrangement has economic advantages for both the alebrije-makers and the owners of the forests where the wood is produced. Michael Chibnik is Professor of Anthropology at the University of Iowa. He has conducted fieldwork in Belize, Peru, Mexico, and in various parts of the United States. His research interests include economic anthropology, artisans, work organization, agricultural decision-making, and political ecology. He is the author of Crafting Tradition: The Making and Marketing of Oaxacan Wood Carvings (University of Texas Press, 2003) and Risky Rivers: The Economics and Politics of Floodplain Farming in Amazonia (University of Arizona Press, 1994), and editor of Farm Work and Fieldwork: American Agriculture in Anthropological Perspective (Cornell University Press, 1987). Dr. Silvia E. Purata is a Mexican ethnoecologist based in Xalapa, Veracruz. She is a member of People and Plants International, an organization that works to integrate conservation and the use of natural resources. Purata has conducted research on the methods indigenous peoples use to extract non-timber forest products (NTFPs) in tropical forests and the fate of such systems in varying socioeconomic circumstances. She has also been working on the promotion of forest certification in the Selva Maya.     

Multiple glassy states in a simple model system

Experiments, theory, and simulation were used to study glass formation in a simple model system composed of hard spheres with short-range attraction ("sticky hard spheres"). The experiments, using well-characterized colloids, revealed a reentrant glass transition line. Mode-coupling theory calculations and molecular dynamics simulations suggest that the reentrance is due to the existence of two qualitatively different glassy states: one dominated by repulsion (with structural arrest due to caging) and the other by attraction (with structural arrest due to bonding). This picture is consistent with a study of the particle dynamics in the colloid using dynamic light scattering.     

Consumption strategies in Mexican rural households: pursuing food security with quality

Food quality is an important issue on the global agenda, particularly in high- and middle-income economies, but of little concern in designing Mexico’s food policy. Food policy has focused on quantity and in the case of maize, on satisfying domestic demand by supporting large commercial agriculture and importing from abroad. However, and as argued in this paper, obtaining a food staple (maize-tortilla) of quality is also an important issue for rural households and contributes to motivating continued smallholder production. Based on case studies in the rural district of Atlacomulco, in the state of Mexico, as well as in two regions of the state of Chiapas, this paper analyzes the production and consumption strategies of rural households. We focus on goals of food security and quality and note differential trends among households of varying characteristics and local contexts. We find that the motivation of small-scale producers to grow maize should be supported by Mexico’s food policy.     

Action research on alternative land tenure arrangements in Wenchi,Ghana: learning from ambiguous social dynamics and self-organized institutional innovation

This study reports on action research efforts that were aimed at developing institutional arrangements beneficial for soil fertility improvement. Three stages of action research are described and analyzed. We initially began by bringing stakeholders together in a platform to engage in a collaborative design of new arrangements. However, this effort was stymied mainly because conditions conducive for learning and negotiation were lacking. We then proceeded to support experimentation with alternative arrangements initiated by individual landowners and migrant farmers. The implementation of these arrangements too ran into difficulties due to intra-family dynamics and ambiguities regarding land tenure. Further investigations to find out how ambiguities could be tackled revealed that the local actors themselves had taken initiatives towards developing institutional innovations to reduce ambiguities. However, there is still considerable scope for further development of these self-organized innovations. The article ends with a reflection on inter-disciplinary action research, where it is argued that making “mistakes” is an inherent and necessary characteristic in action research that aims to address complex social issues.

Is it economically feasible to harvest by management zone?

The economics of harvesting wheat based on input management zones in the northern wheatbelt of Western Australia was studied using a simulated field of regular dimensions with varying zone sizes and layouts. Fertilizer application rates and crop yield and quality data from field trials of input management were used to estimate the gross crop revenue and harvesting costs from the different field layouts and zone combinations. As a general observation there was no consistency in the results; harvesting by zone generated more gross income in some combinations of field layout and yield quantity scenarios, but not in others. However, there were key factors in determining whether it was profitable to harvest by zone. These were prior knowledge of the potential yield and quality characteristics of grain from each zone in a field, and the layout of zones within a field.