New molecular markers linked to qualitative and quantitative powdery mildew and scald resistance genes in barley for dry areas

A partial genetic linkage map was constructed on 71 doubled-haploid lines derived from a cross between the barley lines Tadmor and WI2291 with 181 molecular markers. The segregating population was used to detect markers linked to the gene Mlg conferring resistance to powdery mildew (Erysiphe graminis f. sp. hordei) and to genes for quantitative resistance to scald (Rhynchosporium secalis). The gene Mlg on chromosome 4H was flanked by two AFLP markers at a distance of 2.0 and 2.4 cM, respectively. QTLs for resistance to scald were detected on chromosomes 2H and 3H. This association of molecular markers with qualitative and quantitative disease resistance loci represents a valuable starting-point for marker-assisted selection. This revised version was published online in July 2006 with corrections to the Cover Date.     

Recycling endosomes supply AMPA receptors for LTP

Long-term potentiation (LTP) of synaptic strength, the most established cellular model of information storage in the brain, is expressed by an increase in the number of postsynaptic AMPA receptors. However, the source of AMPA receptors mobilized during LTP is unknown. We report that AMPA receptors are transported from recycling endosomes to the plasma membrane for LTP. Stimuli that triggered LTP promoted not only AMPA receptor insertion but also generalized recycling of cargo and membrane from endocytic compartments. Thus, recycling endosomes supply AMPA receptors for LTP and provide a mechanistic link between synaptic potentiation and membrane remodeling during synapse modification.     

Side-on copper-nitrosyl coordination by nitrite reductase

A copper-nitrosyl intermediate forms during the catalytic cycle of nitrite reductase, the enzyme that mediates the committed step in bacterial denitrification. The crystal structure of a type 2 copper-nitrosyl complex of nitrite reductase reveals an unprecedented side-on binding mode in which the nitrogen and oxygen atoms are nearly equidistant from the copper cofactor. Comparison of this structure with a refined nitrite-bound crystal structure explains how coordination can change between copper-oxygen and copper-nitrogen during catalysis. The side-on copper-nitrosyl in nitrite reductase expands the possibilities for nitric oxide interactions in copper proteins such as superoxide dismutase and prions.     

Chondrules with peculiar REE patterns: implications for solar nebular condensation at high C/O

Rare earth element (REE) data from two ordinary chondrite chondrules show distinct negative chondrite-normalized concentration anomalies of samarium, europium, and ytterbium. The peculiar patterns may be the result of REE gas/solid fractionation at an oxygen fugacity lower than has been assumed for the canonical solar nebula. We suggest that the two ordinary chondrite chondrules acquired the fractionated REE patterns by incorporation of highly reduced, ultrarefractory condensates in their precursors. This interpretation implies that high-temperature condensation processes occurred in nebular environments with a strong deficit in oxygen, such as regions with an enhanced carbon/oxygen ratio.     

Are landscapes over-irrigated in Southwest Florida? A spatial�Ctemporal analysis of observed data

Monthly water billing records for eleven cities in Hillsborough County Florida were available from 2001 through 2007. Irrigation was estimated from total water use based on two different methods to estimate basic indoor water use and assumed impervious areas. Estimated irrigation use was compared with a calculated irrigation requirement by a water balance to test if homeowners were over-irrigating. Results showed that on average, the mean estimated irrigation was lower than the calculated irrigation requirements in most of the cities and years given the uncertainties in this analysis. The calculated irrigation ranged from 612 to 744 mm year⁻¹, whereas the average estimated irrigation ranged from 264 to 684 mm year⁻¹. However, there were some homeowners that greatly exceeded the calculated irrigation requirement. The estimated irrigation increased temporarily in areas under urban development, which was evidenced by built landscape expansion. Good correlation was found between the annual estimated irrigation and the annual calculated irrigation requirements, when the per capita method was used, but not between the annual estimated irrigation and the annual rainfall. Future conservation programs can use this methodology to identify users where substantial opportunity for water savings exists.     

Bahiagrass crop coefficients from eddy correlation measurements in central Florida

Bahiagrass (Paspalum notatum) is a warm-season grass used primarily in pastures and along highways and other low maintenance public areas in Florida. It is also used in landscapes to some extent because of its drought tolerance. Bahiagrass can survive under a range of moisture conditions from no irrigation to very wet conditions. Its well-watered consumptive use has not been reported previously. In this study, bahiagrass crop coefficients (K _c) for an irrigated pasture were determined for July 2003 through December 2006 in central Florida. The eddy correlation method was used to estimate crop evapotranspiration (ET_c) rates. The standardized reference evapotranspiration (ET_o) equation (ASCE-EWRI standardization of reference evapotranspiration task committee report, 2005) was applied to calculate ET_o values using on site weather data. Daily K _c values were estimated from the ratio of the measured ET_c and the calculated ET_o. The recommended K _c values for bahiagrass are 0.35 for January–February, 0.55 for March, 0.80 for April, 0.90 for May, 0.75 for June, 0.70 for July–August, 0.75 for September, 0.70 for October, 0.60 for November, and 0.45 for December in central Florida. The highest K _c value of 0.9 in May corresponded with maximum vapor pressure deficit conditions as well as cloud free conditions and the highest incoming solar radiation as compared to the rest of the year. During the summer (June to August), frequent precipitation events increased the cloud cover and reduced grass water use. The K _c annual trend was similar to estimated K _c values from another well-watered warm-season grass study in Florida.     

Diazaquinomycins E–G,Novel Diaza-Anthracene Analogs from a Marine-Derived Streptomyces sp.

As part of our program to identify novel secondary metabolites that target drug-resistant ovarian cancers, a screening of our aquatic-derived actinomycete fraction library against a cisplatin-resistant ovarian cancer cell line (OVCAR5) led to the isolation of novel diaza-anthracene antibiotic diazaquinomycin E (DAQE; 1), the isomeric mixture of diazaquinomycin F (DAQF; 2) and diazaquinomycin G (DAQG; 3), and known analog diazaquinomycin A (DAQA; 4). The structures of DAQF and DAQG were solved through deconvolution of X-Ray diffraction data of their corresponding co-crystal. DAQE and DAQA exhibited moderate LC₅₀ values against OVCAR5 of 9.0 and 8.8 μM, respectively. At lethal concentrations of DAQA, evidence of DNA damage was observed via induction of apoptosis through cleaved-PARP. Herein, we will discuss the isolation, structure elucidation, and biological activity of these secondary metabolites.     

Whole farm implications on the application of variable rate technology to every cropped field

In the last 10 years precision agriculture has evolved and it is now possible to manage cropping inputs at the sub field scale. However, the expected return generated by these management practices varies with the amount and predictability of the spatial variation in crop yield across the field and may vary from field to field across the farm. We analysed the spatial variation of crop yield from 20 fields totalling 2832 ha from a 5200 ha farm in Western Australia at the field and the sub field scale to determine the economic value of introducing variable rate management (VRT) strategies to fields across the entire farm. In this case study, 6 out of 20 fields generated an additional economic payoff of AU$15/ha when managed with VRT over uniform management. Sensitivity analysis found that the starting levels of soil fertility were an important driver of the payoff for managing a field with VRT. If starting soil fertility was low and uniform across the field, then no fields generated an economic return of more than AU$7.00/ha when managed with VRT. Other factors, including commodity price, fertiliser price, amount of variation in crop yield within the field moderately increased the value of adopting VRT across fields within farm the value of VRT increased if fertiliser budgets were constrained, particularly if the yield distribution of the field was negatively skewed. While VRT does add value to many fields across the farm, the gains are small and the technology must be implemented cheaply for it to be viable.     

Collaboration and distances between German immunological institutes – a trend analysis

Background

The hypothesis that distance matters but that in recent years geographical proximity has become less important for research collaboration was tested. We have chosen a sample–authors at German immunological institutes–that is relatively homogeneous with regard to research field, language and culture, which beside distance are other possible factors influencing the willingness to co-operate. We analyse yearly distributions of co-authorship links between institutes and compare them with the yearly distributions of distances of all institutes producing papers in journals indexed in the Science Citation Index, editions 1992 till 2002. We weight both types of distributions properly with paper numbers.

Results

One interesting result is that place matters but if a researcher has to leave the home town to find a collaborator distance does not matter any longer. This result holds for all years considered, but is statistically most significant in 2002. The tendency to leave the own town for collaborators has slightly increased in the sample. In addition, yearly productivity distributions of institutes have been found to be lognormal.

Conclusion

The Internet did not change much the collaboration patterns between German immunological institutes.