Isotopic signature of N(2)O produced by marine ammonia-oxidizing archaea

The ocean is an important global source of nitrous oxide (N(2)O), a greenhouse gas that contributes to stratospheric ozone destruction. Bacterial nitrification and denitrification are thought to be the primary sources of marine N(2)O, but the isotopic signatures of N(2)O produced by these processes are not consistent with the marine contribution to the global N(2)O budget. Based on enrichment cultures, we report that archaeal ammonia oxidation also produces N(2)O. Natural-abundance stable isotope measurements indicate that the produced N(2)O had bulk δ(15)N and δ(18)O values higher than observed for ammonia-oxidizing bacteria but similar to the δ(15)N and δ(18)O values attributed to the oceanic N(2)O source to the atmosphere. Our results suggest that ammonia-oxidizing archaea may be largely responsible for the oceanic N(2)O source.     

Climate‐induced vulnerability of fisheries in the Coral Triangle: Skipjack Tuna thermal spawning habitats

We investigated projected changes in sea surface temperature (SST) and the associated impacts on spawning habitat for skipjack tuna (Katsuwonus pelamis) in the Coral Triangle region (CT). A multimodel aggregate of SST CMIP5 models for the CT region, based on a comprehensive skill validation assessment, was used to identify the five best performing of 36 models tested for inclusion in a regional multimodel ensemble. Monthly 1° SST multimodel aggregate projections for the CT region under RCP8.5 show that increases in SST, as high as 2.8°C (mean value), will likely occur by the end of this century. Using these estimates of SST change, we applied three parameterizations of skipjack tuna spawning temperatures to assess the potential for change in spawning habitat within the CT region. The three spawning temperature parameterizations were as follows: (a) a square‐wave function derived from catch data with boundaries at 26 and 30°C; (b) a symmetric Gaussian function derived from the SEAPODYM models; and (c) an asymmetric Gaussian function that modifies the SEAPODYM curve in (b) to include the results of relevant physiological experiments. All three parameterizations show similar geographic patterns, with the amount of favourable spawning habitat decreasing throughout the central, equatorial CT region and increasing at higher latitudes. However, the three parameterizations show marked differences in the modelled magnitude of change, with an asymmetric Gaussian function (ASGF) showing a regionwide average of 66.1% decline in favourable spawning habitat between 2015 and 2099. These projected changes in tuna spawning habitats are likely to have important consequences on local and regional fisheries management in the CT region.     

Spawning, early development and first feeding in the gobiid fish Priolepis nocturna

The reproductive behavior, embryonic development and early larvae of Priolepis nocturna are described. Three pairs of P. nocturna began spawning 41 days after acquisition and maintained a 5–10 day spawning cycle lasting beyond several months. Spawning was initiated by the female who signaled her readiness to spawn by displaying to the male. Egg clutch size averaged 1578 ± 51.23 eggs and ranged from 268 to 3121. Egg length averaged 0.82 ± 0.01 mm total length (TL) and ranged from 0.75 to 0.90 mm. Egg width averaged 0.51 ± 0.51 mm total width (TW) and ranged from 0.49 to 0.52 mm. Fertilized eggs were ovoid in shape and attached to the ceiling of provided shelters via adhesive filaments at the proximal end. Hatching rates averaged 97.3 ± 0.51% and ranged from 91.9 to 99.8%. Larvae measuring 1.89 ± 0.04 mm TL hatched 121 ± 0.5 h post fertilization and did not rotate position prior to hatching. Skeletal elements of the chondrocranium were simplistic and dominated by the hyoid, hyomandibulosymplectic cartilage, ethmoid and Meckel's cartilage in first feeding larvae. No elements were added to the cranial architecture by 5 days post hatch (DPH) when larvae measured 2.05 ± 0.04 mm TL. First feeding larvae consumed only dinoflagellates and tintinnids suggesting that feeding was constrained by a poorly developed feeding mechanism. Embryology and larval development are described to 5 DPH.     

THE DIGESTIBILITY AND VOLUNTARY INTAKE OF S22 AND H.1 RYEGRASS, S170 TALL FESCUE, S48 TIMOTHY, S215 MEADOW FESCUE AND GERMINAL COCKSFOOT

Pure swards of S22 Italian ryegrass, H.1 hybrid ryegrass, S170 tall fescue, S48 timothy, S215 meadow fescue and Germinal cocksfoot were each harvested at several stages of maturity during first growth in the spring, and in the subsequent regrowths. Each batch of herbage was fed to sheep in a digestion trial under conditions of voluntary intake. Results from the first growth herbages showed the expected fall in digestibility with increasing maturity. However, the digestibility of S22, H.1, S170 and S48 began to fall well before ear emergence, whereas the digestibility of Germinal fell only slowly up to the time of ear emergence, as had been found previously with S24 and S23 ryegrass and S37 cocksfoot. The rate of fall of digestibility in H.1 and S48 (0.4 units/day) also appeared to be lower than with the perennial ryegrasses and cocksfoot (0.5 units/day). The monthly regrowths within each herbage were of similar digestibility, but the mean digestibility of regrowths differed between herbages, being highest for S215 and lowest for Germinal and S170. The grasses with highest digestibility in the early Spring, in particular S22 ryegrass, were not, however, always the most digestible in the subsequent regrowths. The numbers of sheep fed on each herbage were insufficient to show whether there were significant differences in voluntary intake between different herbage species of the same digestibility. It is suggested that an intake/digestibility relationship, based on data from more animals, should be developed for each herbage species. Only if different relationships are found can it be concluded that factors other than level of digestibility have an effect on intake.     

Using knowledge of behaviour and optic physiology to improve fish passage through culverts

Culverts reduce connectivity for aquatic animals by being both a hydraulic and physical barrier. However, altered light intensity may also be a behavioural barrier to fish movement, especially for diurnal species that have adapted to moving when it is light. We propose that knowledge of optical physiology and fish behaviour, two important mechanisms underpinning movement, can inform efforts to improve fish movement through culverts. We firstly review the sensory systems of fish with reference to visual sense and explore how this affects fish movement. We then highlight theoretical knowledge that can help us understand fish behaviour and the potential mismatch between the conditions under which fish have evolved and altered conditions within culverts. We describe potential knowledge gaps and directions for future research to improve our understanding of how culverts may affect fish movement. Finally, we explore the potential costs and ecological benefits of different mitigation options to identify those with the most promise for managing the light environment in culverts to facilitate movement. For researchers and managers exploring this subject, we suggest an approach that: (a) identifies light requirements for movement by different species, (b) tests movement under different light conditions and (c) considers an integrative assessment method for testing fish behaviour around culverts. Understanding how optical physiology, fish behaviour and culvert design influence fish movement can improve connectivity for a range of species.     

Multiple watershed alterations influence fish community structure in Great Plains prairie streams

Stream fish distributions are commonly linked to environmental disturbances affecting terrestrial landscapes. In Great Plains prairie streams, the independent and interactive effects of watershed impoundments and land cover changes remain poorly understood despite their prevalence and assumed contribution to declining stream fish diversity. We used structural equation models and fish community samples from third‐order streams in the Kansas River and Arkansas River basins of Kansas, USA to test the simultaneous effects of geographic location, terrestrial landscape alteration, watershed impoundments and local habitat on species richness for stream‐associated and impoundment‐associated habitat guilds. Watershed impoundment density increased from west to east in both basins, while per cent altered terrestrial landscape (urbanisation + row‐crop agriculture) averaged ~50% in the west, declined throughout the Flint Hills ecoregion and increased (Kansas River basin ~80%) or decreased (Arkansas River basin ~30%) to the east. Geographic location had the strongest effect on richness for both guilds across basins, supporting known zoogeography patterns. In addition to location, impoundment species richness was positively correlated with local habitat in both basins; whereas stream‐species richness was negatively correlated with landscape alterations (Kansas River basin) or landscape alterations and watershed impoundments (Arkansas River basin). These findings suggest that convergences in the relative proportions of impoundment and stream species (i.e., community structure) in the eastern extent of both basins are related to positive effects of increased habitat opportunities for impoundment species and negative effects caused by landscape alterations (Kansas River basin) or landscape alterations plus watershed impoundments (Arkansas River basin) for stream species.     

Movement patterns of Brook Trout in a restored coastal stream system in southern Massachusetts

Coastal Brook Trout (Salvelinus fontinalis) populations are found from northern Canada to New England. The extent of anadromy generally decreases with latitude, but the ecology and movements of more southern populations are poorly understood. We conducted a 33‐month acoustic telemetry study of Brook Trout in Red Brook, MA, and adjacent Buttermilk Bay (marine system) using 16 fixed acoustic receivers and surgically implanting acoustic transmitters in 84 individuals. Tagged Brook Trout used the stream, estuary (50% of individuals) and bay (10% of individuals). Movements into full sea water were brief when occurring. GAMM models revealed that transitions between habitat areas occurred most often in spring and fall. Environmental data suggest that use of the saline environment is limited by summer temperatures in the bay. Movements may also be related to moon phase. Compared to more northern coastal populations of Brook Trout, the Red Brook population appears to be less anadromous overall, yet the estuarine segment of the system may have considerable ecological importance as a food resource.     

Orthopedic Infections in Equine Long Bone Fractures and Arthrodeses Treated by Internal Fixation: 192 Cases (1990–2006)

Objective: To determine the rate of postoperative infection (POI) for internal fixation repaired equine long bone fractures and arthrodeses and identify associated risk factors. Study Design: Case series. Animals: Horses (n=192) with fracture repair of the third metacarpal and metatarsal bones, radius, ulna, humerus, tibia, and femur, or arthrodesis with internal fixation. Methods: Medical records (1990–2006) were reviewed for signalment, anatomic location, fracture classification and method of repair, technique and surgical duration, bacterial species isolated, postoperative care, onset of POI, and outcome. Results: Of 192 horses (171 [89%] closed, 21 [11%] open fractures), 157 (82%) were discharged from the hospital. Infection occurred in 53 (28% horses), of which 31 (59%) were discharged. Repairs without POI were 7.25 times more likely to be discharged from the hospital. Closed fractures were 4.23 times more likely to remain uninfected and 4.59 times more likely to be discharged from the hospital compared with open fractures. Closed reduction and internal fixation was associated with a 2.5‐fold reduction in rate of POI and a 5.9 times greater chance for discharge from the hospital compared with open reduction and internal fixation. Females had a strong trend for increased POI when compared with colts and stallion but not geldings. Conclusions: Overall rate of POI was 28%. Fracture classification, method of repair, gender, and surgical duration were significant risk factors.