Impacts of exotic forest pathogens on Mediterranean ecosystems: four case studies

Mediterranean ecosystems are hotspots of biodiversity. Because of a coincidence of high species richness and human presence, Mediterranean biodiversity is particularly threatened by processes such as habitat degradation, fragmentation and loss, pollution, climate change and introduction of invasive species. Invasive tree pathogens are among the problematic exotic species of California, Chile, the Mediterranean, South Africa and Australia. In this review, we provide an update on a selection of non-native tree pathogens currently posing a threat in Mediterranean ecosystems. The impact of exotic forest pathogens range from large-scale tree and shrub mortality in native ecosystems (Phytophthora ramorum on the West Coast of the USA) to disruption of plantations of exotic (e.g., Seiridium cardinale on planted Monterey cypress in California, Fusarium circinatum on Monterey pine worldwide) and native trees (introduction of the North American Heterobasidion irregulare in stone pine woodland in Italy). Genetic analyses are instrumental in improving our understanding and management of these outbreaks. There is a need for more empirical data on how novel pathosystems are likely to develop under novel climates, as well as interdisciplinary collaborations among forest pathologists, theoretical modellers and climatologists. The magnitude of the observed effects of some exotic tree diseases makes it important to try and minimize the risk of the inadvertent movement of plant pathogens when planning assisted migration activities to enable plant species to cope with rapid climate change.     

Glorious past, uncertain present, bad future? Assessing effects of land-use changes on habitat suitability for a threatened farmland bird species

Land-use changes have strong impacts on biological communities. Among them, land abandonment is threatening a large number of conservation-concern species associated with semi-natural habitats shaped by ‘traditional’ farming. We focused on the red-backed shrike as a model for investigating the effect of land abandonment on a threatened bird species, and used historical data to model dynamic scenarios. We explored variations in habitat suitability from the 1950s to the present and predicted possible future variations. After investigating local habitat preferences of the species, we formulated a spatially explicit model of habitat suitability for shrikes according to current land-use types; then, we evaluated past habitat suitability, by applying the model to three known past scenarios, and simulated the habitat changes after land abandonment. By combining a habitat-association approach with past and future land use scenarios, we assessed and predicted the effects of habitat changes caused by abandonment. Shrike occurrence was favoured by the cover of four types of grassland and of shrubland with trees, and negatively affected by broadleaved woodlands. The current average habitat suitability is less than half of what it was in the 1950s. Future predictions in a complete abandonment scenario suggest that important decrease could be expected 10 or 20 years after abandonment, and that after 30 years the red-backed shrike would be completely extinct. Alternative scenarios involving partial abandonment suggested that subsidy policies may mitigate the effects of abandonment. Knowing land-use dynamics allowed the exploration of effects of land-use changes and corroborated the importance of low-intensity farming for conservation.     

A preliminary investigation of the relationship between the “moment of resistance” of the canine spine, and the frequency of traumatic vertebral lesions at different spinal levels

The aims of this work were to re-evaluate the moments of resistance (MoRs) of the vertebral column proposed by Slijper (1946) in the dog and to study the relationship between the MoRs and the frequency distribution of vertebral traumas in the same species. The spine (C2-L7) of four dogs was measured to obtain MoRs and subsequently scanned with a dual-energy X-ray absorptiometer (DXA). These findings were then analysed retrospectively the frequency distribution of canine vertebral fractures and luxations, diagnosed radiographically at a referral practice. The highest percentage of vertebral injuries affected the T9-L7 tract. This study confirmed that this segment was characterized by a rising trend of the MoR curves and presumably bore the major bending forces. The significant correlation between T9-L1 MoRs and DXA values supports the Slijper’s hypothesis suggesting the posterior thoracic region as the weakest segment of the body-axis.     

Human IgE binding to the glycosidic moiety of bovine kappa-casein

IgE ability for recognizing milk proteins was assayed in the serum of an adult atopic patient who outgrew cow milk allergy in early childhood. A number of protein species included in casein from bovine milk were detected by human IgE in immunoblotting experiments. Comparing these results with those obtained from an analysis using antibody preparations specifically directed toward the different casein fractions, IgE-reactive bands were identified as isoforms of kappa-casein. IgE-reactive protein was not present in neither bovine cheese, regardless of cheese-making technology and time ripening, nor milk from any other dairy animal, such as ewe, goat, and water buffalo. Chemical deglycosylation of protein bands immobilized onto nitrocellulose proved that the glycosidic moiety of bovine kappa-casein was principally involved in IgE recognition.     

Differentiation of extractive and synthetic salicin. The 2H aromatic pattern of natural 2-hydroxybenzyl alcohol

The natural abundance deuterium NMR characterization of four commercially available samples (Kahlbaum, Aldrich, Fluka, and Extrasynthese) of salicin 1 in comparison with two extractive samples from Salix humboldiana and Salix purpurea L. and with a synthetic material, performed on the pentaacetate derivative 2 and on diacetyl salicyl alcohol 4, is reported. Product 2 from S. humboldiana and the sample from salicin Kahlbaum show mean (D/H)aromatic values of 117 and 121 ppm, whereas, for the remaining, values of 146, 154, 153, and 150 ppm are observed, thus suggesting that salicin Kahlbaum is from extractive origin. The (D/H) values at positions 5' and 6' of the sugar moiety suggest a hypothesis on the origin of the glucose residue discriminating between those deriving from C3 or C4 plants. The analysis of 4, obtained from 3, formed in the beta-glucosidase hydrolysis of salicin 1, reveals in the natural samples from S. purpurea and from Kahlbaum the trend (D/H)4(para) > (DH)3(meta) approximately (D/H)5(meta) > (D/H)6(ortho), the first example of deuterium pattern of an ortho-oxygen-substituted phenylpropanoid. The three samples derived from commercial 1 (Aldrich, Fluka, and Extrasynthese) and the synthetic sample show almost identical deuterium content at positions 4 and 6 (around 153 ppm), whereas for the two meta positions (D/H)3 > (D/H)5 (ca. 162 and 140 ppm, respectively). Product 4, obtained from 3 submitted to acid-catalyzed deuteration, shows different deuterium incorporations in the two meta positions (which are ortho/para to the activating phenolic hydroxyl group), suggesting that possibly the deuterium abundance at the two meta positions may be affected by exchange phenomena with the medium.     

Genetic parameters estimation in an Italian horse native breed to support the conversion from agricultural uses to riding purposes

Horses are nowadays mainly used for sport and leisure purposes, and several local breeds, traditionally used in agriculture, are exposed to the risk of extinction. The long-term survival of local horse breeds depends on strategies to both monitor their genetic diversity and to find their sustainable role in the equine market. Thus, several local horse breeds need to adapt their breeding objective to allow a modernization process. The Bardigiano is an example of such horse breeds; we, therefore, studied the existing evaluation protocol from a genetic standpoint to assess the protocol's suitability to convert the Bardigiano from an agricultural to a riding horse. To this end, we estimated genetic parameters for four conformation measurements, ten grading traits and 23 linear traits. For conformation measurements, the heritabilities ranged from 0.31 for cannon bone circumference to 0.63 for height at withers. For conformation and attitude grading traits, the highest heritability (0.34) was estimated for development and the lowest (0.09) for gaits. The heritabilities for linear traits ranged from 0.05 for the leg straightness to 0.32 for the coat colour. Genetic correlations between linear traits and corresponding grading traits varied considerably, ranging from −0.42 to 0.98. This study showed that the current evaluation protocol in the Bardigiano horse is appropriate for genetic evaluation. Genetic parameters estimation can, in turn, be used to develop novel breeding values to help this conversion. Our study paves the way to optimize the Bardigiano horse breeding programme, and it may help several other local horse breeds experiencing similar issues.     

Will all the trees fall? Variable resistance to an introduced forest disease in a highly susceptible host

Although tanoak (Notholithocarpus densiflorus syn. Lithocarpus densiflorus) is the species most affected by the introduced pathogen Phytophthora ramorum, with demonstrable risk of extirpation, little is known about the origin, range or structuring of the tree's susceptibility. We examined variation in resistance to P. ramorum using a wound inoculation assay of detached leaves from trees at five geographically separated sites, and a non-wound inoculation assay on twigs from trees at two sites. The structure of variation in resistance was compared to the structure at nine nuclear microsatellite markers.Resistance varied quantitatively, with 23% and 12% of the variation among individuals and populations, respectively. There was a significant correlation between resistance in detached leaves and lesion size in non-wounding twig inoculations. Among-population genetic diversity at nine microsatellite loci was weakly structured but significantly non-zero, with 9.5% of variation among populations. Within-population neutral genetic diversity was a poor predictor of resistance, and estimates of phenotypic distances for resistance were no greater than neutral genetic distances.The limited phenotypic and genetic structure we found indicates that tanoaks at all study sites are susceptible, and there is no evidence of prior selection for disease resistance. We conclude that tanoak populations across the species’ range are at risk, but local disease dynamics will depend on both host genetics and environmental conditions.     

Hydrologic controls on water chemistry, vegetation and ecological patterns in two mires in the South-Eastern Alps (Italy)

We examined how hydrology influenced water chemistry, vegetation, nutrient status, aboveground net primary production (ANPP) and litter decomposition rates in two mires on the South-Eastern Alps of Italy. One of the mires had a modest hydraulic gradient and prevalently acted as a recharge system, although there were short phases of vertical flow reversal during dry periods. This mire was, therefore, prevalently fed by rainwater and was covered by bog-like vegetation, mainly hummocks and scrubs with a ground layer rich in Sphagnum mosses. The other mire presented a steeper hydraulic gradient, with the surface being fed by mineral water either by surface runoff or by vertical, upwards directed ground water flow. Compared to the bog-dominated mire, the pore water was less acidic and richer in telluric cations. This mire was covered by fen-like vegetation, prevalently fen meadows. Nitrogen (N) content in the vegetation was very similar in the two mire sites, while phosphorus (P) content was lower in the fen-dominated site. Contrary to our expectations, ANPP did not differ significantly between the two mire sites while litter decomposition rates were significantly lower in the fen-dominated mire, presumably because of P limitation of decomposers. This suggests that the development of ombrogenous mires in this region need not be due to increased accumulation of peat during succession from mineralwater-fed to rainwater-fed conditions.