Trophic dynamics in two South American estuaries encompassing industrial development and a biodiversity hotspot

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Economic assessment of commercial-scale Edwardsiella ictaluri vaccine trials in U.S. catfish industry

Abstract

Enteric Septicemia of Catfish (ESC) is a ruinous bacterial disease affecting the U.S. catfish industry. Previous attempts to develop ESC vaccines have failed to achieve industry acceptance, largely attributed to difficulties in delivering the vaccine to immunocompetent fish. Recently, a live attenuated ESC vaccine has been developed, coupled with a mechanized platform designed to accurately deliver measured doses of vaccine with feed. This delivery scheme for vaccine-feed admixture has shown tremendous promise under controlled research settings. This study evaluated the economic effects of on-going commercial-vaccination trials on catfish fingerling operations in Mississippi. Commercial-vaccination trials for both channel and hybrid catfish demonstrated significant improvement in survival, growth, feed consumption, feed conversion and gross yield. At a realistic vaccination cost of $750/ha, the net economic benefits to channel and hybrid catfish fingerling-production phases were $3199 and $6145/ha, respectively. Whole-farm models showed additional profit ranging from $71,758 to $133,887/400-ha on farms that integrate fingerling production to their production strategies due to appropriation of more of the otherwise incumbent fingerling production acreage into foodfish production. Commercial adoption of the oral-vaccination platform would greatly enhance profitability while laying the foundation for development and delivery of polyvalent vaccines against other catfish diseases.     

Unmanned aerial vehicle canopy reflectance data detects potassium deficiency and green peach aphid susceptibility in canola

There is growing evidence that potassium deficiency in crop plants increases their susceptibility to herbivorous arthropods. The ability to remotely detect potassium deficiency in plants would be advantageous in targeting arthropod sampling and spatially optimizing potassium fertilizer to reduce yield loss due to the arthropod infestations. Four potassium fertilizer regimes were established in field plots of canola, with soil and plant nutrient concentrations tested on three occasions: 69 (seedling), 96 (stem elongation), and 113 (early flowering) days after sowing (DAS). On these dates, unmanned aerial vehicle (UAV) multi-spectral images of each plot were acquired at 15 and 120 m above ground achieving spatial (pixel) resolutions of 8.1 and 65 mm, respectively. At 69 and 96 DAS, field plants were transported to a laboratory with controlled lighting and imaged with a 240-band (390–890 nm) hyperspectral camera. At 113 DAS, all plots had become naturally infested with green peach aphids (Hemiptera: Aphididae), and intensive aphid counts were conducted. Potassium deficiency caused significant: (1) increase in concentrations of nitrogen in youngest mature leaves, (2) increase in green peach aphid density, (3) decrease in vegetation cover, (4) decrease in normalized difference vegetation indices (NDVI) and decrease in canola seed yield. UAV imagery with 65 mm spatial resolution showed higher classification accuracy (72–100 %) than airborne imagery with 8 mm resolution (69–94 %), and bench top hyperspectral imagery acquired from field plants in laboratory conditions (78–88 %). When non-leaf pixels were removed from the UAV data, classification accuracies increased for 8 mm and 65 mm resolution images acquired 96 and 113 DAS. The study supports findings that UAV-acquired imagery has potential to identify regions containing nutrient deficiency and likely increased arthropod performance.     

Utilization of common ditch vegetation in the reduction of fipronil and its sulfone metabolite

BACKGROUND: Fipronil, a phenylpyrazole insecticide, and its oxidative sulfone metabolite are two potential pollutants from treated rice and cotton production. A consequence of these pollutants occurring in surface runoff is degradation of downstream aquatic ecosystems. Utilization of primary intercept drainage ditches as management practices to reduce fipronil concentrations and loads has not been examined. This study used ditch mesocosms planted with monospecific stands of common emergent wetland vegetation to determine if certain plant species were more proficient in fipronil mitigation. RESULTS: Three replicates of four plant species were compared against a non-vegetated control to determine differences in water column outflow concentrations (microg L(-1)) and loads (microg). There were no significant differences between vegetated and control treatments in outflow concentrations (F = 0.35, P = 0.836) and loads (F = 0.35, P = 0.836). The range of fipronil reduction was 28-45% for both concentration and load. Unlike fipronil, fipronil sulfone concentrations and load increased by 96-328%. CONCLUSION: The increase in fipronil sulfone was hypothesized as a direct consequence of oxidation of fipronil within each mesocosm. The type of ditch vegetation had no effect on fipronil reduction. Future research needs to examine initial concentrations and hydraulic retention times to examine potential changes in reduction capacities.     

Evolving and devolving bycatch reduction devices in an Australian penaeid-trawl fishery

Since bycatch reduction devices (BRDs) were first tested in Australian penaeid-trawl fisheries almost 20 years ago, there have been ongoing refinements to a discrete range of legislated designs; mostly in response to dynamic fishery-specific operational requirements. This study assesses the relative utility of the latest versions of two generic BRDs that have evolved/devolved in an estuarine fishery. Compared with a codend containing no BRD, a simplified Nordmøre-grid and radial escape section significantly reduced the total weight of bycatch by 74 and 36%, respectively. Catches of the targeted school prawns (Metapenaeus macleayi) were also reduced by 4 and 11%, respectively, although, at least for the Nordmøre-grid, these losses were apparently offset by the practicality of the revised design in terms of a simpler and cheaper construction. The presence of large quantities of displaced submerged plants (e.g. Egeria densa and Hydrilla verticillata) on the trawl grounds at certain times (which preclude using the Nordmøre-grid) may similarly compensate for the reduced efficiency of the radial escape section. In addition to quantifying the performance of the revised BRDs, the results provide direction for their future refinement in this and other similar fisheries.     

Population Diversity of Puccinia graminis is Sustained Through Sexual Cycle on Alternate Hosts

A high degree of virulence diversity has been maintained in the population of Puccinia graminis f. sp. tritici （Pgt） in northwestern United States. Although Berberis vulgaris is present in the region and Pgt has been isolated from aecial infections on B. vulgaris, the population is too diverse to be explained by the limited presence of B. vulgaris alone. Since 2008, we have isolated P. graminis from aecial infections on fruits of Mahonia repens and Mahonia aquifolium from northwestern United States. These two native woody shrub species, widely distributed in western North America, were once classified as resistant to P. graminis based on artificial inoculations. By isolating P. graminis from aecia, we established that M. repens and M. aquifolium along with B. vulgaris （albeit infrequent） serve as the alternate hosts ofP. graminis in the region. The isolates of P. graminis from Mahonia of North America had diverse virulence patterns and most of the isolates could be differentiated on Morocco, Line E, Chinese Spring, Little Club, LMPG-6, Rusty, and other genotypes that are considered to be universally susceptible to most Pgt isolates. This discovery explained the persistence of virulence diversity of Pgt observed in isolates derived from uredinia on cereal crops in the region. In addition to cereal crops, uredinial stage of the P. graminis population is sustained by wild grasses, especially Elymus glaucus, a native grass sharing the same habitat with the rusted Mahonia spp. Although virulence to some important stem rust resistance genes was observed in some isolates derived from Mahonia of North America when tested against single stem rust resistance gene stocks, the overall virulence is very limited in these isolates. This is likely a result of limited selection pressure on the rust population. In contrast to northwestern United Sates, the Pgt population in east of the Rocky Mountains of North America has declined steadily with a single race, QFCSC, being predominant in the last decade. This decline is likely due to a combination of factors, of which a lack of sexual recombination in the region is perhaps the most important one.     

Mitigating unaccounted fishing mortality from gillnets and traps

Gillnets and traps often are considered to have fewer holistic environmental impacts than active fishing gears. However, in addition to the targeted catches, gillnets and traps still cause unwanted mortalities due to (i) discarding, (ii) ghost fishing of derelict gear, (iii) depredation, (iv) escaping or dropping out of gear, (v) habitat damage, and potentially (vi) avoiding gear and predation and (vii) infection of injuries sustained from most of the above. Population‐level concerns associated with such ‘unaccounted fishing mortalities’ from gillnets and traps have been sufficient to warrant numerous attempts at mitigation. In this article, we reviewed relevant research efforts, locating 130 studies in the primary literature that concomitantly quantified mortalities and their resolution through technical modifications, with the division of effort indicating ongoing concerns. Most studies (85) have focused on discard mortality, followed by ghost‐fishing (24), depredation (10) and escape (8) mortalities. The remaining components have been poorly studied (3). All problematic mortality components are affected by key biological (e.g. species), technical (e.g. fishing mechanisms) and/or environmental (e.g. temperature) factors. We propose that these key factors should be considered as part of a strategy to reduce impacts of these gears by first assessing modifications within and then beyond conventional configurations, followed by changes to operational and handling practices. Justification for this three‐tiered approach is based not only on the potential for cumulative reduction benefits, but also on the likely ease of adoption, legislation and compliance.     

Scenarios for global biodiversity in the 21st century

Quantitative scenarios are coming of age as a tool for evaluating the impact of future socioeconomic development pathways on biodiversity and ecosystem services. We analyze global terrestrial, freshwater, and marine biodiversity scenarios using a range of measures including extinctions, changes in species abundance, habitat loss, and distribution shifts, as well as comparing model projections to observations. Scenarios consistently indicate that biodiversity will continue to decline over the 21st century. However, the range of projected changes is much broader than most studies suggest, partly because there are major opportunities to intervene through better policies, but also because of large uncertainties in projections.