Fitting growth with the von Bertalanffy growth function: a comparison of three approaches of multivariate analysis of fish growth in aquaculture experiments

Three approaches for multivariate analysis of fish growth in aquaculture experiments with Nile tilapia (Oreochromis niloticus niloticus L.) based on the von Bertalanffy growth curve are presented and compared. The approaches are: an extended Gulland‐and‐Holt (GH) plot, a forced extended GH plot and a multilinear regression analysis for the growth parameter K. All three models provide valuable insight into the major environmental factors influencing the daily growth rate and explain 28–46% of the variance of the observed daily growth rate of the used data set. For all three methods, the modelled parameter is significantly related to the net yield of Nile tilapia and can, therefore, be used for the predictive modelling of management scenarios. The extended GH plot loads the influence of environmental parameters upon L_∞, while the forced extended GH plot and Direct fitting of K load the influence on the growth parameter K. The latter is more in the tradition of aquaculture research. But the forced extended GH plot and Direct fitting of K can only be applied if L_∞ of the cultured species is known, as the selected L_∞ influences the variance in the regression variables.     

Effects of no‐take area size and age of marine protected areas on fisheries yields: a meta‐analytical approach

Marine protected areas (MPAs) are often promoted as tools for biodiversity conservation as well as for fisheries management. Despite increasing evidence of their usefulness, questions remain regarding the optimal design of MPAs, in particular concerning their function as fisheries management tools, for which empirical studies are still lacking. Using 28 data sets from seven MPAs in Southern Europe, we developed a meta‐analytical approach to investigate the effects of protection on adjacent fisheries and asking how these effects are influenced by MPA size and age. Southern European MPAs showed clear effects on the surrounding fisheries, on the ‘catch per unit effort’ (CPUE) of target species, but especially on the CPUE of the marketable catch. These effects depended on the time of protection and on the size of the no‐take area. CPUE of both target species and the marketable catch increased gradually by 2–4% per year over a long time period (at least 30 years). The influence of the size of the no‐take area appeared to be more complex. The catch rates of the entire fishery in and around the MPA were higher when the no‐take areas were smaller. Conversely, catch rates of selected fisheries that were expected to benefit most from protection increased when the no‐take area was larger. Our results emphasize the importance of MPA size on its export functions and suggest that an adequate, often extended, time frame be used for the management and the evaluation of effectiveness of MPAs.     

Inherent bias in using aggregate CPUE to characterize abundance of fish species assemblages

We have analyzed the practice of assessing an assemblage of fish species in a multispecies fishery on the basis of aggregate catch per unit effort (CPUE), which is the summed catch of all species per unit of effort. We show that at the onset of fishing or of a large positive or negative change in fishing effort, aggregate CPUE will be hyper-responsive, that is, relative change of aggregate CPUE will be greater than that of aggregate abundance. We also show that as the fishery reaches equilibrium, the aggregate CPUE in most circumstances will continue to be hyper-responsive, with a greater relative change from its value at the start than the aggregate abundance. However, there are less likely circumstances in which the aggregate CPUE will be hyper-stable compared to aggregate abundance. The circumstances leading to hyper-responsiveness or hyper-stability depend on the distribution of productivity and fishery vulnerability parameters among the species in the aggregation.     

To pool or not to pool? Guidelines for pooling samples for use in surveillance testing of infectious diseases in aquatic animals

Samples from multiple animals may be pooled and tested to reduce costs of surveillance for infectious agents in aquatic animal populations. The primary advantage of pooling is increased population‐level coverage when prevalence is low (<10%) and the number of tests is fixed, because of increased likelihood of including target analyte from at least one infected animal in a tested pool. Important questions and a priori design considerations need to be addressed. Unfortunately, pooling recommendations in disease‐specific chapters of the 2018 OIE Aquatic Manual are incomplete and, except for amphibian chytrid fungus, are not supported by peer‐reviewed research. A systematic review identified only 12 peer‐reviewed aquatic diagnostic accuracy and surveillance studies using pooled samples. No clear patterns for pooling methods and characteristics were evident across reviewed studies, although most authors agreed there is a negative effect on detection. Therefore, our purpose was to review pooling procedures used in published aquatic infectious disease research, present evidence‐based guidelines, and provide simulated data examples for white spot syndrome virus in shrimp. A decision tree of pooling guidelines was developed for use by peer‐reviewed journals and research institutions for the design, statistical analysis and reporting of comparative accuracy studies of individual and pooled tests for surveillance purposes.     

Selection of taxa as indicators of river and freshwater wetland quality in the UK

• 1. To assess the efficacy of environmental management policies and practices, there is a progressive transition from monitoring of activities towards assessment of their outcomes for the environment.
• 2. Population trends of key taxonomic groups can serve as useful indicators of broader environmental integrity and health. Several necessary and desirable criteria for selecting meaningful and suitable indicators are discussed. The attributes of a range of taxa and survey methods used for their assessment are discussed with reference to these criteria.
• 3. Survey methods, data holdings and analytical methods for populations of wild birds at present provide a good basis for developing indicators of the quality of fresh waters at a landscape scale. Other taxa are not necessarily any less appropriate; however, survey design and data representativeness are often limiting factors to the use of other taxa for assessing geographic and temporal trends.
• 4. Taxonomic science and ecological monitoring are necessary for determining society' progress with sustainable development and for informing appropriate enhancements to policy and management practice, particularly so for fresh waters.

Copyright © 2007 John Wiley & Sons, Ltd.     

Effects of cage netting colour and density on the skin pigmentation and stress response of Australian snapper Pagrus auratus (Bloch & Schneider, 1801)

The unnaturally dark pigmentation of cultured Australian snapper Pagrus auratus can be improved through dietary astaxanthin supplementation and by holding fish in tanks with a white background. The practical application of these laboratory‐based findings was examined with two experiments to establish if the advantages of transferring fish to light coloured tanks before harvest could be achieved on‐farm using white cages and to determine the effects of fish density on skin colour. For the first experiment, snapper (mean TL=29.7 cm) were transferred from a commercial snapper sea cage to black or white netted cages and fed diets supplemented with unesterified astaxanthin (supplied as Lucantin^® Pink, BASF) at 0 or 39 mg kg^?1 for 42 days. Skin colour was measured using the CIE (black–white), (green–red), (blue–yellow) colour scale. Snapper held in white netting cages became significantly lighter (higher ) than snapper held in black cages; however, values were not as high as previous laboratory‐based studies in which snapper were held in white plastic‐lined cages. Snapper fed astaxanthin displayed significantly greater and values, and total carotenoid concentrations after 42 days. In addition, total carotenoids were higher in fish from black than white cages. The second experiment was designed to investigate whether density reduced the improvements in skin colour achieved by holding fish in white coloured cages and whether cage colour affected stress. Snapper (mean weight=435 g) were acclimated to black cages and fed 39 mg kg^?1 astaxanthin for 44 days before transferring to black or white plastic‐lined cages at 14 (low), 29 (mid) or 45 (high) kg m^?3 for 7 days after which time skin colour, plasma cortisol and plasma glucose concentrations were measured. Skin lightness () was greater in snapper transferred to white plastic‐lined cages with the lightest coloured fish obtained from the lowest density after 7 days. Density had no effect on plasma cortisol or glucose levels after 7 days, although plasma cortisol was elevated in snapper from black cages. For improved skin colouration we recommend feeding unesterified astaxanthin at 39 mg kg^?1 for approximately 6 weeks and transferring snapper to white plastic‐lined cages or similar at low densities for short periods before harvest rather than producing fish in white netting sea cages subject to biofouling.     

Effects of dietary astaxanthin concentration and feeding period on the skin pigmentation of Australian snapper Pagrus auratus (Bloch & Schneider, 1801)

A single‐factor experiment was conducted to investigate the effects of dietary astaxanthin concentration on the skin colour of snapper. Snapper (mean weight=129 g) were held in white cages and fed one of seven dietary levels of unesterified astaxanthin (0, 13, 26, 39, 52, 65 or 78 mg astaxanthin kg^?1) for 63 days. Treatments comprised four replicate cages, each containing five fish. The skin colour of all fish was quantified using the CIE L^*, a^*, b^* colour scale after 21, 42 and 63 days. In addition, total carotenoid concentrations of the skin of two fish cage^?1 were determined after 63 days. Supplementing diets with astaxanthin strongly affected redness (a^*) and yellowness (b^*) values of the skin at all sampling times. After 21 days, the a^* values increased linearly as the dietary astaxanthin concentration was increased before a plateau was attained between 39 and 78 mg kg^?1. The b^* values similarly increased above basal levels in all astaxanthin diets. By 42 days, a^* and b^* values increased in magnitude while a plateau remained between 39 and 78 mg kg^?1. After 63 days, there were no further increases in measured colour values, suggesting that maximum pigmentation was imparted in the skin of snapper fed diets >39 mg kg^?1 after 42 days. Similarly, there were no differences in total carotenoid concentrations of the skin of snapper fed diets >39 mg kg^?1 after 63 days. The plateaus that occurred in a^* and b^* values, while still increasing in magnitude between 21 and 42 days, indicate that the rate of astaxanthin deposition in snapper is limited and astaxanthin in diets containing >39 mg astaxanthin kg^?1 is not efficiently utilized. Astaxanthin retention after 63 days was greatest from the 13 mg kg^?1 diet; however, skin pigmentation was not adequate. An astaxanthin concentration of 39 mg kg^?1 provided the second greatest retention in the skin while obtaining maximum pigmentation. To efficiently maximize skin pigmentation, snapper growers should commence feeding diets containing a minimum of 39 mg unesterified astaxanthin kg^?1 at least 42 days before sale.     

Comparative Study of the Adsorption Selectivity of Cr(VI) onto Cationic Hydrogels with Different Functional Groups

Two types of hydrogels with different functional groups, trimethylamine on quaternary ammonium and dimethylethoxyamine on quaternary ammonium, were synthesized. Type 1 and type 2 hydrogels were characterized with Fourier transform infrared, X-ray photoelectron spectroscopy and zeta potential analysis. The anion selectivity of these two hydrogels was investigated. The surface charges of the type 2 hydrogel were lower than those of type 1, probably because of the presence of the hydroxyl group in the ethoxy group. The Cr(VI) removal capacity of type 2 hydrogel was, therefore, less than that of type 1 hydrogel, although their adsorption rates were similar. The anion selectivity of the hydrogels was found to have a similar order: Cr(VI) > sulphate > bromide > As(V). Under the co-presence of Cr(VI) and sulphate conditions, type 2 hydrogel shows a higher selectivity towards Cr(VI). The higher hydrophobicity was caused by the presence of the ethoxy group on the quaternary ammonium in type 2 hydrogel and thus increased in selectivity towards monovalent ions (i.e. HCrO₄⁻). In addition, the hydrogels have a high reusability. Compared with type 1 hydrogel, type 2 hydrogel has an advantage for applications in Cr(VI) removal and recovery processes.     

Phytochemicals and antioxidant activity of milled fractions of different wheat varieties

The health-promoting effects of whole-grain consumption have been attributed in part to their unique phytochemical contents and profiles that complement those found in fruits and vegetables. Wheat is an important component of the human diet; however, little is known about the phytochemical profiles and total antioxidant activities of milled fractions of different wheat varieties. The objectives of this study were to investigate the distribution of phytochemicals (total phenolics, flavonoids, ferulic acid, and carotenoids) and to determine hydrophilic and lipophilic antioxidant activity in milled fractions (endosperm and bran/germ) of three different wheat varieties, two of which were grown in two environments. Grain samples of each of the wheat varieties were milled into endosperm and bran/germ fractions. Each fraction was extracted and analyzed for total phenolics, ferulic acid, flavonoids, carotenoid contents, and hydrophilic and lipophilic antioxidant activities. Total phenolic content of bran/germ fractions (2867-3120 micromol of gallic acid equiv/100 g) was 15-18-fold higher (p < 0.01) than that of respective endosperm fractions. Ferulic acid content ranged from 1005 to 1130 micromol/100 g in bran/germ fractions and from 15 to 21 micromol/100 g in the endosperm fractions. The bran/germ fraction flavonoid content was 740-940 micromol of catechin equiv/100 g. On average, bran/germ fractions of wheat had 4-fold more lutein, 12-fold more zeaxanthin, and 2-fold more beta-cryptoxanthin than the endosperm fractions. Hydrophilic antioxidant activity of bran/germ samples (7.1-16.4 micromol of vitamin C equiv/g) was 13-27-fold higher than that of the respective endosperm samples. Similarly, lipophilic antioxidant activity was 28-89-fold higher in the bran/germ fractions (1785-4669 nmol of vitamin E equiv/g). Hydrophilic antioxidant activity contribution to the total antioxidant activity (hydrophilic + lipophilic) was >80%. In whole-wheat flour, the bran/germ fraction contributed 83% of the total phenolic content, 79% of the total flavonoid content, 51% of the total lutein, 78% of the total zeaxanthin, 42% of the total beta-cryptoxanthin, 85% of the total hydrophilic antioxidant activity, and 94% of the total lipophilic antioxidant activity. Our results showed that different milled fractions of wheat have different profiles of both hydrophilic and lipophilic phytochemicals. These findings provide information necessary for evaluating contributions to good health and disease prevention from whole-wheat consumption.     

Impacts of lost fishing gear on coral reef sessile invertebrates in the Florida Keys National Marine Sanctuary

The Florida Keys coral reef ecosystem supports multimillion-dollar commercial and recreational fisheries. The ecological effects caused by fishing gear that is lost when cut or broken after snagging on the bottom is a growing concern to managers and scientists. Few data exist, however, to assess the impacts of lost fishing gear to benthic organisms and habitat structure. In this study, 63 offshore coral reef and hard-bottom sites were surveyed during 2001 to quantify the impacts of lost fishing gear to coral reef sessile invertebrates. Lost hook-and-line fishing gear accounted for 87% of all debris (N=298 incidences) encountered and was responsible for 84% of the 321 documented impacts to sponges and benthic cnidarians, predominantly consisting of tissue abrasion causing partial individual or colony mortality. Branching gorgonians (Octocorallia) were the most frequently affected (56%), followed by milleporid hydrocorals (19%) and sponges (13%). Factors affecting the impacts of lost fishing gear include sessile invertebrate density, the density of lost fishing gear, and gear length. While lost hook-and-line fishing gear is ubiquitous in the Florida Keys, less than 0.2% of the available milleporid hydrocorals, stony corals, and gorgonians in the habitats studied are adversely affected in terms of colony abrasions and partial mortality.