Increased abundance of patatins,lipoxygenase and miraculins in a thaxtomin A-habituated potato Russet Burbank somaclone with enhanced resistance to common scab

Potato common scab caused by the actinobacterium Streptomyces scabiei is characterized by the formation of corky lesions on tubers that reduce their marketability. Management of common scab is very complex and often ineffective under various environmental conditions. Using potato varieties that are more resistant to common scab remains one of the most efficient strategies to control this disease. However, very little is known about the factors associated with resistance to common scab. Somaclone RB9 regenerated from thaxtomin A-habituated potato Russet Burbank calli produced tubers more resistant to common scab than the original variety. Comparison of the RB9 tuber proteome with that of Russet Burbank using label-free quantitative proteomic analysis revealed changes in the accumulation of defence-related proteins from the patatin and lipoxygenase (LOX) families, which are involved in the metabolism of lipids, and of two miraculins of the Kunitz-type protease inhibitors family. The implication of LOX during common scab infection was studied using synchronized minitubers developed from leaf-bud cuttings. S. scabiei infection stimulated the accumulation of LOX in both Russet Burbank and RB9 minitubers, but this accumulation was intensified in RB9 minitubers. Infection also increased LOX activity in Russet Burbank and RB9 minitubers. However, LOX activity measured in noninfected RB9 minitubers was similar to that of infected Russet Burbank minitubers, indicating endogenous activation of LOX activity in RB9 minitubers. We discuss how increased LOX abundance and activity in the somaclone RB9 may contribute to improving tuber defence against common scab.     

The dietary value for sea-bass larvae (Dicentrarchus labrax) of the rotifer Brachionus plicatilis fed with or without a laboratory-cultured alga

Rotifers were fed on a laboratory-cultured alga, Platymonas (= Tetraselmis) suecica, and/or a diet composed of commercial single-cell proteins. They were given to sea-bass larvae up to day 15–20 after hatching, while Artemia nauplii were supplied from day 9–13. At day 21, the survival rate of fish obtained with rotifers fed on compound diet ranged between 32 and 82%, and their mean weight between 5.0 and 7.8 mg. When rotifers were fed either only on algae or on a mixture of 33% algae and 67% compound diet, the growth and survival rates of sea-bass were not clearly different to those obtained with rotifers fed on compound diet. No significant difference was observed when these rotifers were enriched with nutrients just before distributing them to fish. However, these rates appeared to be quite high in comparison to those obtained by several other authors. We can therefore recommend rotifers fed on compound diet as being, even without enrichment, convenient and low-cost food for sea-bass larvae.     

Sex change and the genetic structure of marine fish populations

The interaction between environmental forces and dispersal characteristics is largely responsible for the patterns of population structure in marine fish. Yet, crucial gaps in knowledge on life-histories and the relative contributions of numerous environmental factors still hinder a thorough understanding of marine population connectivity. One life-history trait so far overlooked by most fish population geneticists is sequential hermaphroditism, whereby individuals first mature as one sex and later in life reverse into the other sex. Population genetic theory predicts that sex-changing fish will present a higher potential for more spatially structured populations than gonochoristic species, as a result of their naturally skewed sex ratio, which is expected to reduce effective population size and hence increase genetic drift. We gathered published data on genetic population structure in marine fish, as summarized by the popular F _ST index, and – after controlling for several potentially confounding factors – we tested the hypothesis that sex-changing species are more genetically structured than gonochoristic ones. Although we found no evidence to support the theoretical expectations, our results suggest new working hypotheses that can stimulate new research avenues at the intersection between physiology, genetics and fisheries science.     

Assessing the sublethal impacts of anthropogenic stressors on fish: An energy‐budget approach

Fish are increasingly exposed to anthropogenic stressors from human developments and activities such as agriculture, urbanization, pollution and fishing. Lethal impacts of these stressors have been studied but the potential sublethal impacts, such as behavioural changes or reduced growth and reproduction, have often been overlooked. Unlike mortality, sublethal impacts are broad and difficult to quantify experimentally. As a result, sublethal impacts are often ignored in regulatory frameworks and management decisions. Building on established fish bioenergetic models, we present a general method for using the population consequences of disturbance framework to investigate how stressors influence ecologically relevant life processes of fish. We partition impact into the initial energetic cost of attempts to escape from the stressor, followed by the energetic impacts of any injury or behavioural change, and their consequent effects on life processes. As a case study, we assess the sublethal effects of catch and release angling for the European sea bass (Dicentrachus labrax, Moronidae), a popular target species for recreational fishers. The energy budget model described is not intended to replace existing experimental approaches but does provide a simple way to account for sublethal impacts in assessment of the impact of recreational fisheries and aid development of robust management approaches. There is potential to apply our energy budget approach to investigate a broad range of stressors and cumulative impacts for many fish species while also using individual‐based models to estimate population‐level impacts.     

Selecting the hologenome to breed for an improved feed efficiency in pigs—A novel selection index

Most traits in animal breeding, including feed efficiency traits in pigs, are affected by many genes with small effect and have a moderately high heritability between 0.1 and 0.5, which enables efficient selection. Since the microbiota composition in the gastrointestinal tract is also partly heritable and was shown to have a substantial effect on feed efficiency, the host genes affect the phenotype not only directly by altering metabolic pathways, but also indirectly by changing the microbiota composition. The effect of the microbiota composition on the breeding value of an animal is the conditional expectation of its breeding value, given the vector with microbiota frequencies, that is The breeding value of an animal can therefore be decomposed into a heritable contribution that arises from an altered microbiota composition and a heritable contribution that arises from altered metabolic pathways within the animal, so Instead of selecting for breeding value , an index comprising the two components and with appropriate weights, that is , can be used. The present study shows how this breeding strategy can be applied in pig genomic selection breeding scheme for two feed efficiency traits and daily gain.     

Comparison of thermal dilution and electrical impedance dilution methods for measurement of cardiac output in standing and exercising horses

OBJECTIVE: To compare cardiac output measured in the pulmonary artery and a carotid artery by use of thermal and electrical impedance dilution. Animals-7 fit, clinically normal Standardbreds between 2 and 5 years of age. PROCEDURE: Transient changes in electrical impedance and temperature of blood were induced by bolus injections of ice-cold saline hypertonic (6% and 9% NaCl) solutions. Cardiac output was calculated by applying Stewart-Hamilton principles to the indicator dilution transients. Measurements were made during sequential exercise episodes on a level treadmill over approximately an 8-fold range of cardiac output values. RESULTS: We detected agreement between cardiac output determined by use of electrical impedance dilution at the pulmonary artery and carotid artery. Cardiac output from thermal dilution measured at the carotid artery exceeded that measured at the pulmonary artery. Cardiac output from the thermal dilution technique exceeded cardiac output from the electrical impedance dilution technique at both locations. CONCLUSIONS AND CLINICAL RELEVANCE: The electrical impedance indicator is conserved on first transit; therefore cardiac output measured by electrical impedance dilution at the carotid artery is reliable over a large range of values. Thermal dilution provides a larger estimate of cardiac output, compared with the electrical impedance dilution technique, probably because of a loss of indicator. The transpulmonary electrical impedance dilution technique may have potential for clinical application, particularly in animals in which catheterization of the pulmonary artery is not appropriate or blood loss must be minimized.     

Rice Straw Composting and Its Effect on Soil Properties

In Egypt, recycling rice straw and organic wastes is of great concern as well as improvement of soil properties. Rice straw compost could improve both organic waste recycling and soil quality. The aim of this study was to evaluate the effect of the rice straw compost, with or without water treatment residuals (WTR), on soil chemical properties and dry weight of canola. The results showed that the addition of rice straw compost and WTR decreased soil salinity and increased Ca⁺², K⁺ and organic matter. The addition of compost and WTR (2:1 wet weight ratio) at level of 10 g dry weight kg^?1 dry soil gave the best reduction in soil salinity compared to compost or WTR only or for level 10 g dry weight kg^?1 dry soil. The results also showed that the available P decreased with the application of WTR while it increased with the application of compost. The study demonstrated that the dry weight and relative increase (R.I %) of dry weight of canola plants increased with the application of WTR and compost to soil. Combinations of WTR and compost to soils had a greater effect on increasing yield and improved the efficiency of WTR on soil properties.