Correct equations for comparing models in diallel analysis

SUMMARY: Correct equations are given to express the parameter estimates of four models for complete diallels as a function of the parameter estimates in the model of Eisen et al. (1983). In recent literature these equations have been partly incorrect. ZUSAMMENFASSUNG: Korrekte Gleichungen für den Vergleich von Modellen in der Diallelanalyse Für die Darstellung der Parametersch?tzwerte von vier Modellen für vollst?ndige Diallele als Funktion der Parametersch?tzwerte des Modells von Eisen et al. (1983), die in der Literatur teilweise fehlerhaft erfolgte, werden korrekte Formeln angegeben.     

Utilizing the accuracy of estimated breeding values to improve selection response

SUMMARY: Stochastic simulation was used to evaluate the increase in selection response by incorporating accuracies of estimated breeding values (ebvs) in an index to form indexed breeding values (ibvs). Simulations were made using a standard population with a selected proportion of 5%, with 10 000 selection candidates and an average accuracy of breeding value determination, r? = 0.4 with variance, σ(r) (2) = 0.075(2) . In the standard population, candidates selected on ibvs showed an 8.4 % increase in average true breeding values (tbvs) compared to selection using ebvs. Using the same standard population, but changing the proportion selected to 1.0 % and 10 %, the relative increase in the average tbvs from ibv selection was 13.5 % and 5.5 % respectively. Similarly, changing r? to 0.22, 0.32 and 0.55, the relative increase from ibv selection was 48 %, 19 % and 1.3 % respectively. As σ(r) was changed to 0.025 and 0.125, the relative increase from ibv selection was 0.6 % and 24 % respectively. In general, the average accuracy in candidates chosen for selection using ibvs was lower than that from selection using ebvs. In the standard population the accuracy was 0.38 from ibv selection and 0.43 from ebv selection. As a result the increase in inbreeding will be lower with ibv than with ebv selection. ZUSAMMENFASSUNG: Verwendung von Genauigkeiten gesch?tzter Zuchtwerte zur Verbesserung des Selektionserfolges Durch stochastische Simulation wurde Steigerung des Selektionserfolges durch Einschlu? von Genauigkeiten gesch?tzter Zuchtwerte (ebvs) in einen Index indizierter Zuchtwerte (ibvs) untersucht. Simulationen wurden mit einer Standardpopulation 5% selektierter von 10 000 Kandidaten und einer durchschnittlichen Genauigkeit der Zuchtwertsch?tzung r = 0.4; σ(r) (2) = 0.075(2) durchgeführt. In der Standardpopulation hatten Kandidaten, mit ibvs selektiert, eine Steigerung des durchschnittlichen wahren Zuchtwertes (tbvs) von 8.4 % verglichen mit Selektion auf ebvs-Basis. Bei Verwendung derselben Standardpopulation, aber Remontierung von 1 % bzw. 10 %, war der relative Zuwachs im durchschnittlichen tbvs bei ibvs-Selektion 13.5 und 5.5%. Die relative Zunahme von der ibvs-Selektion, mit r von 0.22, 0.32 oder 0.55, war 48 %, 19 % und 1.3 %. Bei Ver?nderungen von σ(r) auf 0.25 und 0.125 betrug die relative Zunahme 0.6 und 24 %. Im allgemeinen waren die durchschnittlichen Genauigkeiten bei Selektionskandidaten auf der Basis von ibvs geringer als bei Verwendung von ebvs. In der Standardpopulation waren diese Genauigkeiten 0.38 bei ibvs und 0.43 bei ebvs. Daher sollte die Zunahme der Inzucht mit ibvs geringer sein als mit ebvs.     

Characterisation of a maize-infecting potyvirus from Spain

In order to characterise and classify an unknown maize-infecting potyvirus isolated from fields in northeast Spain, the entire coat protein gene and the C-terminal twothirds of the large nuclear inclusion protein (NIb) gene were cloned and sequenced. Protein sequencing enabled the cleavage site between the two proteins to be deduced and also revealed that on storage the viral coat protein undergoes a specific degradation in which the N-terminal 39 amino acids are removed. Comparison of the nucleotide sequence of the 3 non-coding region of the viral RNA and the predicted amino acid sequence of the coat protein with the equivalent regions of other members of the potyvirus group revealed that the Spanish virus is closely related to maize dwarf mosaic virus strain A.     

Prevalence and spatial distribution of bovine tuberculosis in brushtail possums on a forest-scrub margin

Tuberculosis caused by Mycobacterium bovis was diagnosed in 36 of 68 (53%) brushtail possums (Trichosurus vulpecula) trapped in August 1992 from a population of exceptionally low density (trap catch <3%) on a forest-scrub margin in Westland, New Zealand. The prevalence of tuberculosis in possums, based solely on gross lesions, was at least twice that previously recorded in New Zealand, and was about seven times that recorded from the same population in 1980. More male (66%) than female (33%) possums had grossly visible tuberculous lesions. The distribution of infection appeared continuous along the forest-scrub margin. Both stoats (Mustela erminea) and one of six hares (Lepus europaeus occidentalis) trapped were also infected with M. bovis.     

Observations on three outbreaks of Leptospira interrogans serovar pomona infection in lambs

Sickness and deaths associated with leptospirosis were reported in three lamb flocks in the Manawatu region. The clinical, pathological and serological features of Leptospiru interrogans serovar pomona infection are described. The mucous membranes of affected animals were pale and jaundiced. Haemoglobinuria, haemoglobinaemia and centrilobular hepatocellular necrosis were also consistent findings. All clinically sick lambs had very high titres in the microscopic agglutination test for L. pomona. Circumstantial evidence of pigs being the source of infection was found in one of the three cases.     

A formal method of determining the dietary amino acid requirements of laying‐type pullets during their growing period

1. The amino acid requirements of laying type pullets during the growing period can be estimated by measuring the growth of different components of the body and making use of nutritional constants that define the amount of each amino acid that is required for the production of the tissues being formed.

2. In this experiment, carcase analyses of each of three breeds of pullets were conducted at weekly intervals throughout the growth of the pullets, to 18 weeks of age. Measurements were made of body weight, gut‐fill and feather weight, and chemical analyses consisted of water, protein, lipid and ash measurements of both the body and the feathers. Each age group comprised 10 birds of each breed.

3. Gompertz functions accurately estimated the growth of both body protein and feather protein, to 18 weeks of age, from which the rate of growth of these two components of the body could be estimated. The mature weight of pullets was overestimated by the Gompertz growth curve, which may indicate that a pullet ceases to increase in body protein content once sexual maturity has been reached.

4. Using allometric relationships between the chemical components of the body and of feathers, all the components of growth could be estimated from the growth of body protein and feather protein. These components were then added together to determine the growth rate of the body as a whole.

5. The daily amino acid requirements for 4 functions were calculated, namely, those for the maintenance of body protein and feather protein, and for the gain in body protein and feather protein. These requirements were then summed to determine the requirement of pullets on each day of the growing period.

6. Using the ‘effective energy’ system, the amount of energy required by these pullets was calculated for each day of the growing period, from which the desired daily food intake of the pullets could be predicted. By dividing the amino acid requirement by this daily food intake it was possible to determine the concentration of amino acids that would be needed in the diet in order to meet the requirements of a pullet.

7. The results indicate that the ratio between the requirement for lysine and for methionine and cysteine changes dramatically during the growing period, negating the concept of a fixed ratio between all the amino acids during growth.

8. The above process is the first step in determining the optimal feeding programme for a population of pullets of a given genotype. The constraining effects, of the diet being offered and of the environment in which the pullets are housed, on the food intake and growth rate of each pullet have to be estimated, and such a theory can then be expanded to include all the individuals in the population. Only by the use: of simulation models can all these constraining effects be considered simultaneously.