Culture-independent exploration of the teat apex microbiota of dairy cows reveals a wide bacterial species diversity

Due to their close proximity to the mammary gland tissue, the bacterial communities lining the teat apex of the udders from lactating cows influence udder health. Denaturing gradient gel electrophoresis of the amplified V3 variable region of the 16S rRNA gene was used as a culture-independent method to reveal the bacterial composition of 48 samples originating from the teat apices of twelve Friesian-Holstein dairy cows suffering from clinical mastitis in one quarter. The microbiota belonged to four bacterial phyla: the Actinobacteria (32% of all genera), the Bacteroidetes (1%), the Firmicutes (42%), and the Proteobacteria (25%), encompassing 17 bacterial genera. Some differences in occurrence of these genera were seen when comparing quarters that were non-infected (n=22), subclinically infected (n=14), or clinically infected (n=12). Besides commensal skin-associated bacteria, opportunistic pathogenic bacteria, and mastitis-causing pathogens were found as well. The species diversity varied considerably among the most prevalent bacterial genera. While Corynebacterium and Staphylococcus displayed a large diversity among the recovered sequences, indicating the possible presence of a variety of different species, only a single bacterial species (represented by one sequence) was obtained for the genera Aerococcus, Acinetobacter, and Psychrobacter. In conclusion, introducing culture-independent analysis of teat apical skin swabs in mastitis research revealed an unexpected wide bacterial diversity, with variations between quarters with a different clinical status. In addition to potential mastitis-causing pathogens, it exposed the yet poorly mapped presence of skin-associated and other bacteria residing in close proximity to the mammary gland tissue. PCR-DGGE may thus be considered as a useful tool for the entanglement of animal skin microbiota, in casu the teat apices of dairy cows.     

Differences in transpiration between a forest and an agroforestry tree species in the Sudanian belt

Average population growth in the African Sudanian belt is 3 % per year. This leads to a significant increase in cultivated areas at the expense of fallows and forests. For centuries, rural populations have been practicing agroforestry dominated by Vitellaria paradoxa parklands. We wanted to know whether agroforestry can improve local rainfall recycling as well as forest. We compared transpiration and its seasonal variations between Vitellaria paradoxa, the dominant species in fallows, and Isoberlinia doka, the dominant species in dry forests in the Sudanian belt. The fallow and dry forest we studied are located in northwestern Benin, where average annual rainfall is 1200 mm. Sap flow density (SFD) was measured by transient thermal dissipation, from which tree transpiration was deduced. Transpiration of five trees per species was estimated by taking into account the radial profile of SFD. The effect of the species and of the season on transpiration was tested with a generalized linear mixed model. Over the three-year study period, daily transpiration of the agroforestry trees, V. paradoxa (diameters 8–38 cm) ranged between 4.4 and 26.8 L day^?1 while that of the forest trees, I. doka, (diameters 20–38 cm) ranged from 9.8 to 92.6 L day^?1. Daily transpiration of V. paradoxa was significantly lower (15 %) in the dry season than in the rainy season, whereas daily transpiration by I. doka was significantly higher (13 %) in the dry season than in the rainy season. Our results indicate that the woody cover of agroforestry systems is less efficient in recycling local rainfall than forest cover, not only due to lower tree density but also to species composition.     

New phenolic esters from the resinous exudate of Haplopappus taeda

Two new phenolic esters 9-trans-p-coumaroyloxy-alpha-terpineol (1) and 7-trans-p-coumaroyloxy-taedol (2), both endowed with free radical scavenger activity and cleroda-3,13 (E)-dien-15,18-diol (3) for which a cis stereochemistry at the decalin junction was found, were isolated from the resinous exudate from Haplopappus taeda upper parts.     

木材声学-超声波分等检测技术及工业应用

介绍了在应力波-超声波技术基础上发展起来的木材声学-超声波分等检测技术.通过测量超声波的传播速度以及一定时域内的传播能量,建立关系模型,对木材的抗弯弹性模量(MOE)和抗弯强度(σb)进行评估.该技术可在木结构建筑设计、木结构建筑现场调查、森林质量控制和管理等领域广泛应用.     

Spectroscopic analysis of diversity of Arabinoxylan structures in endosperm cell walls of wheat cultivars (Triticum aestivum) in the HEALTHGRAIN diversity collection

Fifty bread wheat (Triticum aestivum L.) cultivars were selected from the HEALTHGRAIN germplasm collection based on variation in their contents of total and water-extractable arabinoxylan. FT-IR spectroscopic mapping of thin transverse sections of grain showed variation in cell wall arabinoxylan composition between the cultivars, from consisting almost entirely of low-substituted arabinoxylan (e.g., T.aestivum 'Claire') to almost entirely of highly substituted arabinoxylan (e.g., T.aestivum 'Manital') and a mixture of the two forms (e.g., T.aestivum 'Hereward'). Complementary data were obtained using endoxylanase digestion of flour followed by HP-AEC analysis of the arabinoxylan oligosaccharides. This allowed the selection of six cultivars for more detailed analysis using FT-IR and (1)H NMR spectroscopy to determine the proportions of mono-, di-, and unsubstituted xylose residues. The results of the two analyses were consistent, showing that variation in the composition and structure of the endosperm cell wall arabinoxylan is present between bread wheat cultivars. The heterogeneity and spatial distribution of the arabinoxylan in endosperm cell walls may be exploited in wheat processing as it may allow the production of mill streams enriched in various arabinoxylan fractions which have beneficial effects on health.     

Humic acids buffer the effects of urea on soil ammonia oxidizers and potential nitrification

Humic acids (HAs) play an important role in the global nitrogen cycle by influencing the distribution, bioavailability, and ultimate fate of organic nitrogen. Ammonium oxidation by autotrophic ammonia-oxidizing bacteria (AOB) is a key process in ecosystems and is limited, in part, by the availability of NH₄⁺. We evaluated the impact of HAs on soil AOB in microcosms by applying urea (1.0%, equal to 10 mg urea/g soil) with 0.1% bHA (biodegraded lignite humic acids, equal to 1 mg/g soil), 0.1% cHA (crude lignite humic acids) or no amendment. AOB population size, ammonium and nitrate concentrations were monitored for 12 weeks after urea and HA application. AOB densities (quantified by real-time PCR targeting the amoA) in the Urea treatments increased about ten-fold (the final abundance: 5.02 × 10⁷ copies (g of dry soil)⁻¹) after one week of incubation and decreased to the initial density after 12 weeks incubation; the population size of total bacteria (quantified by real-time PCR with a universal bacterial probe) decreased from 1.12 × 10¹⁰ to 2.59 × 10⁹ copies (g of dry soil)⁻¹ at week one and fluctuated back to the initial copy number at week 12. In the Urea + bHA and Urea + cHA treatments, the AOB densities were 4 and 6 times higher, respectively, than the initial density of approximately 5.07 × 10⁶ copies (g of dry soil)⁻¹ at week 1 and did not change much up to week 4; the total bacteria density changed little over time. The AOB and total bacteria density of the controls changed little during the 12 weeks of incubation. The microbial community composition of the Urea treatment, based on T-RFLP using CCA (canonical correspondence analysis) and pCCA (partial CCA) analysis, was clearly different from those of other treatments, and suggested that lignite HAs buffered the change in diversity and quantity of total bacteria caused by the application of urea to the soil. We hypothesize that HAs can inhibit the change in microbial community composition and numbers, as well as AOB population size by reducing the hydrolysis rate from urea to ammonium in soils amended with urea.     

Removal of Anthracene from Recently Contaminated and Aged Soils

Water, Air, &; Soil Pollution - Suspended microplastic and black carbon (BC) particles were determined in surface waters of the Jade system, southern North Sea, including freshwater sources. On...     

Habitat selection and conservation of Sharpe's longclaw (Macronyx sharpei), a threatened Kenyan grassland endemic

Montane grassland is a severely threatened habitat in Kenya. Despite a high level of faunal endemism, it has received very little conservation attention. We investigated habitat selection in a threatened grassland endemic bird species, Sharpe's longclaw (Macronyx sharpei) (family Motacillidae), in order to understand its likely response to land-use changes. Between November 1995 and May 1996, we studied 41 territories of this species on the Kinangop Plateau in central Kenya. With an overall density of 0.4 birds ha⁻¹, longclaws lived in permanent groups of two to seven individuals. They were sedentary and territorial, with a mean home range size of 0.5 ha. The species avoided non-grassland areas entirely, and within grassland showed a strong preference for short grass with tussocks. Territory sizes and foraging ranges were smaller, and rates of pecking for food higher, in this grassland type than in open short grass or long grass. Land use changes, in particular conversion to cultivation or woodlots and ploughing up of grassland to remove tussocks, pose a serious and immediate threat to this species. Dairy farming is potentially compatible with grassland conservation, and conservation-friendly livestock rearing needs to be promoted through economic incentives, awareness-raising and technical advice.     

Bioaccessibility of tocopherols, carotenoids, and ascorbic acid from milk- and soy-based fruit beverages: influence of food matrix and processing

A study was made of the effect of high-pressure processing (HPP) and thermal treatment (TT) on plant bioactive compounds (tocopherols, carotenoids, and ascorbic acid) in 12 fruit juice-milk beverages and of how the food matrix [whole milk (JW), skimmed milk (JS), and soy milk (JSy)] modulates their bioaccessibility (%). HPP (400 MPa/40 °C/5 min) produced a significant decrease in carotenoid and ascorbic acid bioaccessibility in all three beverages and maintained the bioaccessibility of tocopherols in JW and JS while decreasing it in JSy. TT (90 °C/30 s) produced a significant decrease in tocopherol and carotenoid bioaccessibility in all three beverages and increased the bioaccessibility of ascorbic acid. With regard to the food matrix, α-tocopherol and ascorbic acid bioaccessibility was greatest in JW beverages and lowest in JSy beverages, whereas no significant differences were found among the three beverages in terms of carotenoid bioaccessibility. HPP-treated samples showed higher tocopherol and carotenoid bioaccessibility than TT-treated samples, thus indicating that HPP combined with a milk matrix positively modulates the bioaccessibility of certain types of bioactive components of food, mainly those of a lipophilic nature.