Pacific cod in the Anthropocene: An early life history perspective under changing thermal habitats

The rapid decline in Pacific cod (Gadus macrocephalus, Gadidae) biomass following multiple Gulf of Alaska marine heatwaves (2014–2016 and 2019) may be one of the most dramatic documented changes in a sustainably managed marine fishery. As such, fisheries managers are exploring new recruitment paradigms for Pacific cod under novel environmental conditions. In this review, we address the challenges of managing and forecasting Pacific cod populations in the Eastern Pacific where thermal habitats for early life stages are undergoing varying rates of change across space and time. We use observational data to examine changes in distribution, abundance and demographics of the population from 1993 to 2020, and model contemporary and future changes of thermal habitat for both spawning success and age-0 juvenile growth potential. Results indicate that reduced spawning habitat and early life stage abundance may be a precursor to regional population decline, but the recent apparent increases in size-at-age of pre-recruits will have unknown impacts on future recruitment in these regions. We contend that continued monitoring of early life stages will be necessary to track changes in phenology and growth that likely determine size-at-age and the survival trajectories of year classes into the adult population. These include complex size- and temperature-dependent energetics spanning seasonal habitats through the first winter. Climate-ready management of Pacific cod will, therefore, require new process investigations beyond single-season surveys focused on one-life stage.     

The effects of temperature on growth,development and settlement of northern rock sole larvae (Lepidopsetta polyxystra)

Northern rock sole (Lepidopsetta polyxystra) is a commercially important fish in the North Pacific and a focal species in understanding larval transport to nursery grounds in the Bering Sea. However, the temperature‐dependent vital rates and settlement dynamics for this species have not been described in detail. We reared northern rock sole larvae in the laboratory to measure growth, condition, development and settlement parameters across four temperatures (2, 4, 7 and 10°C). Both length and mass‐measured growth rates increased with temperature and were best described by non‐linear regression. Residuals of the length–mass relationships were positively related to temperature, indicating larval condition also increased with temperature. Larval development and settlement were largely size dependent, resulting in reduced larval stage duration and earlier settlement at higher temperatures owing to more rapid growth at elevated temperatures. However, larvae at colder temperatures were less developed at a given size, but more likely to settle at smaller sizes than larvae reared in warmer conditions. These temperature–response parameters can be used to refine current and future transport models for northern rock sole larvae under changing environmental conditions in the North Pacific.     

Ectomycorrhizal mats alter forest soil biogeochemistry

Dense hyphal mats formed by ectomycorrhizal (EcM) fungi are prominent features in Douglas-fir forest ecosystems, and have been estimated to cover up to 40% of the soil surface in some forest stands. Two morphotypes of EcM mats have been previously described: rhizomorphic mats, which have thick hyphal rhizomorphs and are found primarily in the organic horizon, and hydrophobic mats, which occur in the mineral horizon and have an ashy appearance. This study surveyed EcM mat and non-mat soils from eight early and late seral conifer forest stands at the H.J. Andrews Experimental Forest in western Oregon. EcM mats were classified by morphology and taxonomic identities were determined by DNA sequencing. A variety of chemical and biochemical properties, including enzymes involved in C, N, and P cycling were measured. Analysis was confined to a comparison of rhizomorphic mats colonizing the organic horizon with non-mat organic soils, and hydrophobic mats with non-mat mineral soils. Both the organic and mineral horizons showed differences between mat and non-mat enzyme profiles when compared on a dry weight basis. In the organic horizon, rhizomorphic mats had greater chitinase activity than non-mat soils; and in the mineral horizon, hydrophobic mats had increased chitinase, phosphatase, and phenoloxidase activity compared to the non-mat soil. The rhizomorphic mats had 2.7 times more oxalate than the non-mats and significantly lower pH. In the mineral horizon, hydrophobic mats had 40 times more oxalate and significantly lower pH than non-mat mineral soils. Microbial biomass C was not significantly different between the rhizomorphic mat and non-mat organic soils. In the mineral horizon, however, the hydrophobic mats had greater microbial biomass C than the non-mat soils. These data demonstrate that soils densely colonized by EcM fungi create a unique soil environment with distinct microbial activities when compared to non-mat forest soils.     

Immunology of bovine respiratory syncytial virus infection of cattle

Bovine respiratory syncytial virus (BRSV) is a respiratory pathogen of cattle that causes severe disease in calves alone and as one of several viruses and bacteria that cause bovine respiratory disease complex. Like human RSV this virus modulates the immune response to avoid stimulation of a vibrant CD8+ T cytotoxic cell response and instead promotes a Th2 response. The Th2 skew sometimes results in the production of IgE antibodies and depresses production of the Th1 cytokine interferon γ. Innate immune cells have a pivotal role in guiding the adaptive response to BRSV, with selective secretion of cytokines by pulmonary dendritic cells. Here we review some of the pertinent observations on immune responses to BRSV infection and vaccination and illustrate how experimental infection models have been used to elucidate the immunopathogenesis of BRSV infection. Recent experiments using intranasal vaccination and/or immune modulation with DNA based adjuvants show promise for effective vaccination by the stimulation of Th1 T cell responses.     

Animal production systems of small farms in the Kaski district of Nepal

The aim of this study was to describe animal production on small farms in the Kaski district of Nepal, with the goal of identifying areas where animal health and productivity could be improved. Eighty-five randomly selected farms from four different Village Development Committees were visited. Farmers were interviewed and premises and animals visually inspected on all farms. Feed samples were collected from a subset of farms. The most commonly kept species were water buffalo (used for milk and meat), cattle (used for milk and labor), and goats (used for meat). Average milk production levels were 4.7?kg/day for water buffalo and 1.9?kg/day for cattle. All animals were milked manually, no calves were weaned, and only one farm practiced artificial insemination. A majority of cattle and goats had access to pasture, and a majority of farms fed their working or producing animals concentrates; however, nutritional input was insufficient in terms of energy, protein, and micronutrient content to increase levels of production. Goat-raising was the most profitable endeavor, followed by water buffalo and cattle. We conclude that animals have the potential to contribute significantly to improved livelihoods of farmers in terms of both income generation and non-tangible benefits. However, we found that significant constraints on animal production exist, including insufficient nutritional levels and a lack of preventative care resulting in animal disease. Furthermore, cultural considerations reflecting attitudes toward cattle shape farming in ways that may limit production. Nevertheless, targeted interventions that improve animal health and productivity are possible without being cost prohibitive.     

PREOPERATIVE RADIOTHERAPY FOR VACCINE ASSOCIATED SARCOMA IN 92 CATS

Medical records for 92 cats with a vaccine associated sarcoma receiving preoperative irradiation, with or without chemotherapy, between December 1985 and September 1998 were reviewed. The purposes were to quantify response to treatment and to attempt identification of factors associated with favorable response. Variables evaluated for a relationship to outcome included signalment, tumor location, presence of gross vs. microscopic tumor, radiation field size, irradiation technique, type of surgical procedure, completeness of excision, and chemotherapy (none, carboplatin alone, and others). Time to first event was calculated for the first day of treatment until local tumor recurrence or metastasis, or the date of euthanasia or death. Median time to first event for all 92 cats was 584 days. Only completeness of surgical excision was related to the time to first event. Median time to first event in cats having complete surgical excision was 986 days compared to 292 days for cats with incomplete excision (P = 0.004). Cats requiring bone removal to effect tumor removal had earlier failure than cats having other types of surgery. There was not a significant relationship between administration of chemotherapy or chemotherapy type and time to first event although outcome in cats receiving carboplatin was better than all other treatment groups. Carboplatin addition to preoperative irradiation appears worthy of further study. Preoperative irradiation is an effective treatment for cats with vaccine associated sarcoma, especially if complete excision can be accomplished following irradiation.     

Multispecies functional responses reveal reduced predation at high prey densities and varied responses among and within trophic groups

Understanding predator–prey interactions is critical for marine fisheries and ecosystem management as they shape community structure, regulate prey populations and present energy demands critical for community sustainability. We examined multispecies functional responses of 17 fishes (48 predator‐size combinations) spanning piscivores, planktivores and benthivores for the northeast US continental shelf. Similar to previous work, linear relationships between predation and prey density (Holling type I response) were not supported, since model estimates of handling time were greater than zero for the prey considered. Instead, a clear majority of the predators sampled were Holling type III feeders (sigmoidal; prey switching or learning). For piscivores, nearly all responses were Holling type III with the exception of one being Holling type II (hyperbolic; satiation). Planktivores and benthivores exhibited a combination of type IV (feeding confusion at high prey density) and Holling type III responses. The relationships were predator‐ and prey‐dependent, which is counter to assumptions that are often made of trophic groups. Decreased predation at high prey densities (type IV response) present among planktivores and benthivores suggests an overestimation of predation can occur if ignored. This contrasts with fish and squid prey which primarily invoked a Holling type III response. Functional responses are key to modelling trophic interactions for multispecies and ecosystem models. By refining these inputs in a multispecies context with empirical data, we can advance our understanding of whole‐shelf ecology and improve decision‐making tools for resource management.