An epidemiological simulation model with three scales of spatial hierarchy

ABSTRACT An epidemiological model integrating three organizational scales of host plant populations (e.g., sites, leaves, and plants) is presented. At the lowest (site) scale, the model simulates the dynamics of vacant, latent, infectious, and removed sites. Three types of vacant sites are distinguished, depending on presence of infections at higher scales (leaf or plant). The rate of infection of each type of vacant site is computed according to ratios of autodeposition, allo-leaf-deposition, and allo-plantdeposition. At the leaf and plant scales, the rate of victimization is a function of the rate of infection of vacant sites. Sensitivity analyses showed that deposition patterns (the relative proportions of auto-, allo-leaf-, and allo-plant-depositions) and host structure (leaf size and number of leaves per plant) affected the speed of epidemics at the different scales. Model outputs conformed with results from other approaches in the case of random distribution of the disease. The model hypotheses concerning infection from autodeposited propagules, and their implications for disease epidemics, are discussed. The model can be used to derive relationships between allo-deposition ratios and disease incidences at the three scales. These relationships become simple when disease intensity is low. These relationships may be useful, e.g., to assess the potential efficiency of cultivar mixture to control epidemics. Integration of different organization scales and allo-deposition parameters enables the model to capture important features of epidemics developing in space without using explicitly spatialized variables. Such an approach could be useful to analyze other ecological processes that involve a variety of scales.     

Freezing of sheep faeces invalidates Haemonchus contortus faecal egg counts by the McMaster technique

Faecal pellets from a sheep that was artificially infected with a monoculture of Haemonchus contortus were collected over a 2-h period in the morning. In the laboratory the faeces were thoroughly mixed by hand and 48 by 1 g aliquots of the pellets were sealed in plastic bags, from which the air had gently been expressed. The faecal worm egg count of the sheep was about 14,000 g(-1). Varying numbers of the bags were either processed for faecal worm egg counting (FEC) by the McMaster technique on day 0, or were stored at one of the following temperatures: about 4 degrees C, -10 degrees C or -170 degrees C before processing. The faecal aliquots that were frozen were thawed at room temperature after having been frozen for either 2 h or 7 days, and processing of aliquots maintained at 4 degrees C proceeded shortly after the samples had been removed from the refrigerator. A dramatic reduction in egg numbers was found in all the aliquots that were frozen at -170 degrees C before faecal worm egg counts were done, as well as in those frozen for 7 days at about -10 degrees C. Numerous empty, or partially empty, egg shells were observed when performing the counts in faeces that had been frozen. In contrast, there was no significant reduction in the numbers of eggs in aliquots maintained for 7 days in a refrigerator at +/- 4 degrees C before examination, when compared with others examined shortly after collection of the faeces. Since H. contortus eggs in faeces are damaged by freezing, some methods that can be used for short term preservation are outlined. It is concluded that all nematode egg counts from cryopreserved faeces (whether in a freezer at -10 degrees C or in liquid nitrogen) should possibly be regarded as being inaccurate, unless the contrary can be demonstrated for different worm genera. However, exceptions are expected for the more rugged ova, such as those of the ascarids and Trichuris spp.     

Potential of local agricultural by-products for the rearing of African catfish Clarias gariepinus in Rwanda: effects on growth, feed utilization and body composition

This study was performed to evaluate the effect of replacing fish meal with local by‐products on Clarias gariepinus growth performance, feed utilization and body composition. A control diet contained 50% of fish meal. In four other diets, fish meal was partially replaced by vegetable and animal protein blend composed of sunflower oil cake, soybean oil cake, groundnut oil cake, bean meal, chicken viscera and blood meal. The study was conducted in a recirculating water system at a mean temperature of 23.6°C. The five test diets were compared with a commercial diet developed for African catfish. All diets were balanced to be equal in gross energy (19 kJ g⁻¹) and crude protein (40%). The experimental groups were fed in triplicate for 8 weeks, increasing fish weight from about 6.2 g at start to 52.3 g in the end. Best specific growth rate (SGR=3.4), feed efficiency (FE=1.3) and protein efficiency ratio (PER=3) were obtained with the control diet (diet 50% fish meal), although there were no significant differences between the group of fish fed the control diet and those fed diets based on groundnut oil cake or bean meal, whereas SGR (2.17), FE (0.85) and PER (1.95) were significantly (P<0.01) lower in fish fed diet containing sunflower oil cake. No significant differences (P<0.05) were found in fish fed commercial diet and diets containing bean meal or groundnut oil cake. Groundnut oil cake or bean meal can thus replace at least 50% of fish meal in the diet of Clarias fingerlings without amino acid supplementation. Because of its economic importance and its potential in animal nutrition sunflower oil cake is still an interesting feed ingredient, but its efficiency should be improved by various processing techniques. African catfish can utilize efficiently a diet with low percentage of animal protein without growth reduction.