Nitrogen and oxygen isotope enrichment factors of nitrate at different denitrification rates in an agricultural soil

ABSTRACT

Quantitative evaluation of denitrification by the dual isotope approach, which measures the stable isotope ratios of nitrogen (δ¹⁵N) and oxygen (δ¹⁸O) in nitrate, has been hampered by the wide range of values reported for the ratio of enrichment factors for ¹⁵N and ¹⁸O (¹⁵ε and ¹⁸ε, respectively) during denitrification. The objectives of this study were to determine ¹⁵ε and ¹⁸ε values at different denitrification rates under controlled conditions, and to infer possible mechanisms by which the ¹⁸ε/¹⁵ε ratio is influenced under different conditions. Column experiments were conducted at 25, 15, and 10°C, which enabled determination of ¹⁵ε and ¹⁸ε at different denitrification rates, in the absence of nitrate replenishment from ammonium oxidation and other sources. The values of ¹⁵ε and ¹⁸ε ranged from ?11.8 to ?14.9‰ and from ?8.4 to ?15.9‰, respectively, with ¹⁵ε less sensitive to changes in the denitrification rates. The resultant ¹⁸ε/¹⁵ε ratio, ranging from 0.70 to 1.17, was close to the values reported for sediment incubations, and larger than those for groundwater systems. These results are consistent with the explanations that ¹⁸ε/¹⁵ε value itself is close to unity during denitrification, and that at smaller denitrification rates, concurrent reactions including re-oxidation of nitrite to nitrate lead to smaller apparent fractionation of ¹⁸O and smaller ¹⁸ε/¹⁵ε ratios. This suggests that while linear relationships between δ¹⁸O and δ¹⁵N give a strong evidence of denitrification, apparent ¹⁸ε/¹⁵ε values are site specific and depend on the ambient conditions. In evaluating denitrification in such systems, we suggest the use of ¹⁵ε in preference to ¹⁸ε because ¹⁵ε is less sensitive to denitrification rates.     

Improved waterlogging tolerance of barley (Hordeum vulgare) by pretreatment with ethephon

ABSTRACT

Root growth into hypoxic or anoxic waterlogged soil relies on internal aeration in plants. The plant hormone ethylene helps adapt to waterlogging by inducing the formation of aerenchyma, which provides a low-resistance pathway for the transport of oxygen from the shoot to the root apex. Waterlogging-susceptible crops including barley start to form aerenchyma after suffering waterlogging stress. But waterlogging can be fatal if aerenchyma formation is not fast enough. Here, we investigated whether pre-treating barley with ethephon, an ethylene-releasing agrochemical, could improve its tolerance to mimicked waterlogging conditions (using stagnant deoxygenated agar nutrient solution). In barley growing in aerated nutrient solution, ethephon treatment enhanced aerenchyma formation at the root tips and induced the development of shorter and shallower roots. Pre-treating barley leaves also delayed waterlogging-caused whiting and increased the percentages of viable root-tips under waterlogging conditions. However, the pretreatment did not noticeably increase fresh weight or shoot length. Further studies are needed to optimize ethephon treatment conditions to improve barley production under waterlogged conditions.     

Estimation of supplementary water to paddy fields in the lower Mekong River basin during the dry season

Efficient management of water resources in paddy fields requires an understanding of the volume of supplementary water used. However, quantifying the volume is laborious due to the large amount of data that must be collected and analyzed. The purpose of our study was to estimate the volume of supplementary water used in paddy fields, based on several years of available statistical data, and to provide information on how much water can be supplied to paddy fields in each target area. In this study, the lower Mekong River basin of northeast Thailand, Laos, and Cambodia was selected as the study area. In the first step, we used agricultural statistics for each country, rainfall data acquired from the Mekong River Commission Secretariat (MRCS), and the value of virtual water required per unit of rice production. Because several years of data were used for dry season harvested areas and rice production in each country, the supplementary water to paddy fields in each province was calculated using virtual water and rainfall. This method made it possible to estimate changes in supplementary water in each province. Through this study, the supplementary water to paddy fields during the dry season in three countries was approximated from the minimum number of data sets. Moreover, for cases in which it is not possible to procure agricultural water use data for a hydrological model simulation, an alternative solution is proposed.     

Regulation of CD8+ T cell development by thymus-specific proteasomes

Proteasomes are responsible for generating peptides presented by the class I major histocompatibility complex (MHC) molecules of the immune system. Here, we report the identification of a previously unrecognized catalytic subunit called beta5t. beta5t is expressed exclusively in cortical thymic epithelial cells, which are responsible for the positive selection of developing thymocytes. Although the chymotrypsin-like activity of proteasomes is considered to be important for the production of peptides with high affinities for MHC class I clefts, incorporation of beta5t into proteasomes in place of beta5 or beta5i selectively reduces this activity. We also found that beta5t-deficient mice displayed defective development of CD8(+) T cells in the thymus. Our results suggest a key role for beta5t in generating the MHC class I-restricted CD8(+) T cell repertoire during thymic selection.     

Effects of light quality on the reproduction and morphology of sporophytes of Laminaria japonica (Phaeophyceae)

Responses of the sporophytes of Laminaria japonica to blue, red and white lights were investigated using segments, discs and whole plants. The relative growth rate with regard to the blade's length and width showed no difference among the light conditions during 2 weeks of culturing. On the contrary, the elongation rates of the stipe and the holdfast were 1.7–2.5 times higher under red light than that under white light as a control. Callus formation in the segments was also promoted more under red light conditions than under white or blue light. Blue light irradiation resulted in a 48% and 12% decrease in the relative growth rate of the stipe and the holdfast, respectively, in comparison with the control. When sporophyte discs were cultured for 10 weeks, all discs formed zoosporangial sori 2–3 weeks earlier under blue light than under white light. However, red light inhibited the formation of zoosporangia. Indoleacetic acid (IAA) oxidase activity was about two‐fold higher under blue light than under red light, suggesting that the difference in response between the blue and red light conditions is related to the internal IAA level of the tissues. The developmental, reproductive and morphological effects of blue and red lights will be useful for the artificial control of the life cycle of Laminaria plants and for the development of more efficient cultivation techniques.     

The influence of NGO involvement on local people's perception of forest management: a case study of community forestry in Nepal

Despite high expectations of nongovernmental organizations (NGOs) as project partners in bilateral-aid community forestry (CF) projects in Nepal, it remains unclear whether the NGO involvement favored by donors is efficient. This study examined the influence of NGOs on local people's perceptions of CF management by using a quantitative analysis based on a questionnaire survey. Three different forest user groups (FUGs) supported by the Nepal Swiss Community Forestry Project were selected from the Dolakha and Ramecchap districts: an FUG supported by another FUG acting as an NGO, an FUG supported by an NGO specializing in CF, and an FUG without NGO support. A structured survey examined the perception of CF management based on satisfaction, involvement, and self-reliance in 244 selected households belonging to the three FUGs. Knowledge of CF and personal information was also surveyed and analyzed. The results showed that NGO involvement influences factors such as self-reliance and knowledge of CF. FUG members who were supported by an NGO or an FUG had a significantly higher perception with respect to self-reliance and knowledge than did members without such support. This indicates that experienced FUGs can serve as adequate service providers for the CF formation procedure, in a manner similar to that of NGOs. On the other hand, the limited support from NGOs or FUGs during the formation process seemed insufficient to fulfill the expectations of aid agencies with respect to the enhancement of satisfaction and active participation on the part of FUG members. If aid agencies expect NGOs and FUGs to enhance the satisfaction and participation of members, these intermediary organizations should be assigned to support more CF activities than just the formation procedure. Aid agencies should take responsibility for strengthening the capabilities of NGOs and FUGs, as needed.     

Two independent gene loci controlling non-brittle pedicels in buckwheat

The shattering habit in buckwheat occurs because of brittle or weak pedicels. Brittle pedicels are observed in wild buckwheat but not in cultivated buckwheat. Using 2 self-compatible lines, 01AMU2 with brittle pedicels and Kyukei SC2 (KSC2) with non-brittle pedicels, produced by an interspecific cross between Fagopyrum esculentum cv Botansoba (non-brittle) andF. homotropicum (brittle), we investigated the inheritance of brittle pedicels. F₁ plants derived from crosses between Botansoba × 01AMU2 and Botansoba × KSC2 had brittle pedicels. The F₂ population derived from the cross between Botansoba × 01AMU2 showed segregation of brittle and non-brittle pedicels that fit the expected 3:1 ratio, suggesting that non-brittle pedicel in Botansoba is controlled by a single recessive gene (sht1). Another F₂ population, derived from the cross between Botansoba × KSC2, showed segregation of brittle and non-brittle pedicels that fit an expected ratio of 9:7,suggesting that non-brittle pedicel in KSC2is controlled by a different single recessive gene (sht2). Thus, brittle pedicel is achieved by 2 complementary genes Sht1 and Sht2. The sht1 locus is linked to the S locus with a recombination frequency of5.46±1.18 (%). We investigated whether common buckwheat has the allele sht2by crossing 6 common buckwheat lines withKSC2. An analysis of the preliminary data showed that some of the F₁ had brittle pedicels and others had non-brittle pedicels, suggesting that some common buckwheat lines possess both the allelesSht2 and sht2. This revised version was published online in July 2006 with corrections to the Cover Date.     

Long-term Pulmonary Responses to Quadweekly Intermittent Intratracheal Spray Instillations of Magnetite (Fe3O4) Nanoparticles for 52 Weeks in Fischer 344 Rats

Information about potential risks of iron nanomaterials is still limited, while a wide variety of applications are expected. We recently reported acute phase responses of male and female Fischer 344 rats after a single intratracheal spray instillation of Fe₃O₄ nanoparticles (magnetite), clearly showing dose-dependent pulmonary inflammatory changes (Tada et al., J Toxicol Pathol 25, 233–239, 2012). The present study assessed long-term responses of male and female Fischer 344 rats to multiple administrations of magnetite. Ten-week-old male and female Fischer 344 rats (n=20/group) were exposed to a total of 13 quadweekly intermittent intratracheal spray instillations of magnetite during the experimental period of 52 weeks, at doses of 0, 0.2 (low), 1.0 (medium) and 5.0 (high-dose) mg/kg body weight per administration. Absolute and relative lung weights of the high-dose group were significantly higher than those of the control group. Macroscopically, slight enlargement and scattered black patches were recognized in the lungs and the lung-associated lymph nodes of the high-dose group. Histopathologically, infiltration of macrophages phagocytosing magnetite (all dose groups) and of chronic inflammatory cells (medium- and high-dose males and high-dose females), alveolar bronchiolization and granuloma (high-dose group) were observed. In addition, alveolar hyperplasias were observed in some rats of the high-dose group, and cytoplasmic overexpression of β-catenin protein was immunohistochemically found in such lesions. The present results clearly show that instilled magnetite causes chronic inflammatory responses in the lung. These responses occur in a dose-dependent manner without apparent differences among sexes     

Acute Phase Pulmonary Responses to a Single Intratracheal Spray Instillation of Magnetite (Fe3O4) Nanoparticles in Fischer 344 Rats

Iron nanomaterials are of considerable interest for application to nanotechnology-related fields including environmental catalysis, biomedical imaging, drug delivery and hyperthermia, because of their superparamagnetic characteristics and high catalytic abilities. However, information about potential risks of iron nanomaterials is limited. The present study assessed pulmonary responses to a single intratracheal spray instillation of triiron tetraoxide nanoparticles (magnetite) in rats. Ten-week-old male and female Fischer 344 rats (n=5/group) were exposed to a single intratracheal spray instillation of 0 (vehicle), 5.0, 15.0 or 45.0 mg/kg body weight (BW) of magnetite. After 14 days, the rats were sacrificed, and biological consequences were investigated. The lung weights of the 15.0 and 45.0 mg/kg BW male and female groups were significantly higher than those of the control groups. The lungs of treated rats showed enlargement and black patches originating from the color of magnetite. The typical histopathological changes in the lungs of the treated rats included infiltration of macrophages phagocytosing magnetite, inflammatory cell infiltration, granuloma formation and an increase of goblet cells in the bronchial epithelium. The results clearly show that instilled magnetite causes foreign body inflammatory and granulating lesions in the lung. These pulmonary responses occur in a dose-dependent manner in association with the increase in lung weight.