Genomic variability and plasticity of Pseudomonas causing coffee leaf spots in Minas Gerais state,Brazil

Foliar spots caused by Pseudomonas coronafaciens pv. garcae (Pcg), Pseudomonas amygdali pv. tabaci (Pat) and Pseudomonas cichorii (Pch) are major bacterial diseases that can reduce coffee production. However, little is known about the genetic diversity and molecular mechanisms underlying the pathogenicity to coffee plants of these bacteria. In this study, genome sequences of Pcg, Pat and Pch strains isolated from coffee plants in Minas Gerais state, Brazil, were used to assess their variability and plasticity, and compare their type III secretion system (T3SS) and apoplastic effector repertoires as well as tabtoxin biosynthetic/detoxification genes. Genomic diversity was found for all three phytopathogens, among which Pch possesses the highest number of exclusive proteins. The Pcg genome is the most stable whereas that of Pch is the most plastic, which is related to their host ranges. When compared with those of Pseudomonas syringae pv. tomato DC3000, hrp/hrc gene sequences are more conserved in Pcg and Pat than in Pch, which also possesses the smallest T3SS and the largest apoplastic effector repertoires. The only T3SS effector family common to all three pathogens is AvrE, suggesting that, as for other plant–Pseudomonas interactions, it may play a crucial role for pathogenicity towards coffee plants. Apoplastic proteins associated with maintaining the redox balance and degrading proteins/peptides not previously described as important in plant–bacteria interactions were found. Gain/loss of the tabtoxin biosynthetic cluster with retention of the antitoxin gene was observed, indicating that tabtoxin production is not a limiting factor for the occurrence of mixed infections.     

Availability of minerals in rendered meat and bone meal for Nile tilapia: Preliminary observations

A digestibility trial was conducted with 180 Nile tilapia (32.65 ± 4.52 g) fed a reference diet containing 350 g/kg crude protein and 4,500 kcal/kg gross energy. Five different meat and bone meals (MBMs) were evaluated. The test diets compound by 70% of reference diet and 30% of each MBM were elaborated and classified according to ash content: MBM‐430, MBM‐400, MBM‐370, MBM‐340 and MBM‐310. The apparent availability coefficient (AAC) of minerals and the apparent digestibility coefficient (ADC) of dry matter (DM) were subjected to one‐way analysis of variance (p < .05). Differences among ADC and AAC were determined by Tukey's multiple range test (p < .05). When appropriate, a polynomial regression analysis was performed. Linear correlation analyses between MBM chemical composition and the AAC and ADC were performed (p < .01). Higher values of ADC_DM, AAC_Ca and AAC_P were observed in MBM‐310, while low values were observed in MBM‐430. Quadratic effects of ash, P and Ca contents on AAC_Ca, AAC_P and ADC_DM were observed. The AAC_Ca, AAC_P and ADC_DM indicated a negative correlation with ash, P and Ca contents. MBM‐310 exhibited the highest mineral AAC, which could be used as a mineral source for Nile tilapia.     

Prevalence and risk factors for anti-Toxoplasma gondii antibodies in goats of the Seridó Oriental microregion, Rio Grande do Norte state, Northeast region of Brazil

The prevalence and risk factors for anti-Toxoplasma gondii antibodies were investigated in goats of the Seridó Oriental microregion, Rio Grande do Norte state, Northeast region of Brazil. Three hundred and sixty-six blood samples from goats collected by jugular venopuncture were used. For the serologic diagnosis of Toxoplasma gondii infection, the indirect fluorescent-antibody test (IFAT) with cut-off value 1:64 was carried out. The prevalence of anti-T. gondii antibodies was 30.6% [95% CI=25.9-35.6%] with titers ranging from 1:64 to 1:16,384. The multivariate logistic regression analysis showed that the risk factors associated to anti-T. gondii antibodies were presence of cats in the herd, extensive/semi-intensive management systems and lack of mineral supplementation.     

Diagnosis of canine visceral leishmaniasis: biotechnological advances

Human visceral leishmaniasis (HVL) is endemic in the tropical and sub-tropical regions of Africa, Asia, the Mediterranean, Southern Europe and South and Central America, with approximately 500,000 new cases reported annually. As dogs are considered to be the major reservoirs for HVL, the accurate diagnosis of disease in these animals is important. Diagnosis of canine visceral leishmaniasis (CVL) is performed mainly by direct parasitological methods that can yield false-negative results, either because of the very low number of Leishmania spp. organisms in clinical samples (bone marrow and lymph nodes) or because morphological identification is difficult. In addition, these methods are invasive. Conventional serological techniques are limited by cross-reactivity with other parasitic diseases and because several technical procedures have not been standardised. The development of polymerase chain reaction based approaches and immunoassays based on the use of recombinant antigens aimed at improving the sensitivity and specificity of CVL diagnosis is discussed.     

Biosorption of macronutrients by Brazilian tropical peats

The objective of this work was to evaluate the adsorption of macronutrients calcium, potassium, magnesium, nitrogen, and phosphorus in two Brazilian tropical peat samples, investigating the effect of pH and determining the kinetics of the adsorption process. Two different Brazilian tropical peat samples were characterized using FTIR, TG, and SEM techniques. Different pH conditions were tested, as well as different mass concentrations of the peats. Differences in the chemical structures of the peat samples directly influenced the adsorptive capacities for the macronutrients. The adsorptive capacity for nitrogen was highest at pH 3, while the best adsorption of calcium and potassium was obtained at pH 6. The best fit to the data was provided by the pseudo-second-order model, which confirmed the rapid adsorption of calcium by both peats.     

Vitamin E composition of walnuts (Juglans regia L.): a 3-year comparative study of different cultivars

The tocopherol and tocotrienol composition of walnuts (Juglans regia L.) was determined for nine cultivars (cvs. Arco, Franquette, Hartley, Lara, Marbot, Mayette, Mellanaise, Parisienne, and Rego). Walnuts were harvested over three consecutive years from two different geographical origins (Bragan?a and Coimbra, Portugal), for a total of 26 samples. The methodology employed was a normal-phase high-performance liquid chromatography coupled to a series arrangement of a diode array detector followed by a fluorescence detector, allowing the simultaneous analysis of all tocopherols and tocotrienols. The analyses showed that all samples presented a similar qualitative profile composed of five compounds: alpha-tocopherol, beta-tocopherol, gamma-tocopherol, delta-tocopherol, and gamma-tocotrienol. gamma-Tocopherol was the major compound in all samples, ranging from 172.6 to 262.0 mg/kg, followed by alpha- and delta-tocopherols, ranging from 8.7 to 16.6 mg/kg and from 8.2 to 16.9 mg/kg, respectively. Multivariate analysis of the data obtained showed the existence of significant differences in composition among cultivars. These differences were also significant when cultivars were grouped by year of production, showing that besides genetic factors, the vitamin E composition was influenced by environmental factors.     

Improvement of degraded physical attributes of a saline-sodic soil as influenced by phytoremediation and soil conditioners

This study aimed to evaluate the use of phytoremediation and soil conditioners in the recovery of physical attributes of a saline-sodic Fluvic Neossol in Brazil Northeast. The applied treatments were: Atriplex nummularia L., as phytoremediation plant, due to its ability to extract salts from the soil; organic conditioners, such as bovine and sheep manure; gypsum and polymer, as chemical conditioners. Samples with preserved structure were collected at the time of the experiment installation and 18 months after in the layers 0–10 cm and 10–30 cm. The analyzed attributes were: water dispersed clay, dispersion index, bulk density, penetration resistance, soil porosity, and saturated hydraulic conductivity. The use of sheep manure, gypsum and polymer promoted an increase in saturated hydraulic conductivity in the 0–10 cm layer from 4.51 to 16.37 cm day^?1, 11.26 to 23.95 cm day^?1 and 7.24 to 22.77 cm day^?1, respectively. Gypsum increased the macroporosity in the superficial layer by 42.6%. Atriplex and polymer were more efficient at reducing soil penetration resistance. The polymer was more efficient at improving the physical properties. However, it is necessary to consider phytoremediation with Atriplex as a more sustainable alternative that can still be used as complementary fodder in animal feed.     

Anthocyanins present in selected tropical fruits: acerola, jambolão, jussara, and guajiru

Many tropical fruits are rich in anthocyanins, though limited information is available about the characterization and quantification of these anthocyanins. The identification and quantification of anthocyanin pigments in four tropical fruits were determined by HPLC-MS/MS. Fruits studied included acerola (Malphigia emarginata), jussara (Euterpe edulis), jambol?o (Syzygium cumini), and guajiru (Chrysobalanus icaco). All four fruits were found to contain anthocyanin pigments. Anthocyanidin backbones included cyanidin, delphinidin, peonidin, pelargonidin, petunidin, and malvidin. Guajiru contained several acylated forms, while acerola, jussara, and jambol?o contained only nonacylated glycosides. These results demonstrate that these tropical fruits are rich in anthocyanins and that the anthocyanins are widely ranging in anthocyanidin backbone, glycosylation, and acylation.