Cereal yield and quality as affected by nitrogen availability in organic and conventional arable crop rotations: A combined modeling and experimental approach

The effects of nitrogen (N) availability related to fertilizer type, catch crop management, and rotation composition on cereal yield and grain N were investigated in four organic and one conventional cropping systems in Denmark using the FASSET model. The four-year rotation studied was: spring barley–(faba bean or grass-clover)–potato–winter wheat. Experiments were done at three locations representative of the different soil types and climatic conditions in Denmark. The three organic systems that included faba bean as the N fixing crop comprised a system with manure (stored pig slurry) and undersowing catch crops (OF + C + M), a system with manure but without undersowing catch crops (OF ? C + M), and a system without manure and with catch crops (OF + C ? M). A grass-clover green manure was used as N fixing crop in the other organic system with catch crops (OG + C + M). Cuttings of grass-clover were removed from the plots and an equivalent amount of total-N in pig slurry was applied to the cropping system. The conventional rotation included mineral fertilizer and catch crops (CF + C + F), although only non-legume catch crops were used. Measurements of cereal dry matter (DM) at harvest and of grain N contents were done in all plots. On average the FASSET model was able to predict the yield and grain N of cereals with a reasonable accuracy for the range of cropping systems and soil types studied, having a particularly good performance on winter wheat. Cereal yields were better on the more loamy soil. DM yield and grain N content were mainly influenced by the type and amount of fertilizer-N at all three locations. Although a catch crop benefit in terms of yield and grain N was observed in most of the cases, a limited N availability affected the cereal production in the four organic systems. Scenario analyses conducted with the FASSET model indicated the possibility of increasing N fertilization without significantly affecting N leaching if there is an adequate catch crop management. This would also improve yields of cereal production of organic farming in Denmark.     

Emerging resistant microbiota from an acidic soil exposed to toxicity of Cr, Cd and Pb is mainly influenced by the bioavailability of these metals

Purpose

The effect of pollutants in soil microorganisms is an important issue in order to understand their toxic effects in the environment, as well as for developing adequate bioremediation strategies. In this sense, the main objective of this study was to assess the involvement of the indigenous microbiota of an acidic forest Mediterranean soil by artificial pollution with heavy metals, and to detect and isolate resistant microorganisms that could be useful for bioremediation.

Materials and methods

Samples from a previously unpolluted acidic forest soil were amended with Cr(VI), Cd(II) or Pb(II) at total amounts ranging from 0.1 to 5,000 mg?kg^?1. These soil microcosms were incubated under controlled laboratory conditions for 28 days. Soluble fractions of metals were determined from aqueous extracts. Both activity and composition of the microbial community were assessed, respectively, by respirometric assays and molecular analysis (polymerase chain reaction denaturing gradient gel electrophoresis). The isolation of metal-resistant microorganisms was attempted by culture plating from microcosms incubated with high concentrations of metals. Isolated strains were tested in cultures with minimal medium to check for their metal resistance and their capacity to reduce the presence of toxic Cr(VI).

Results and discussion

A decrease in the soil respirometric activity and changes in the microbial community composition were detected from 10/100 mg?kg^?1 Cr and 1,000 mg?kg^?1 Cd and Pb. Presumably resistant bacterial and fungal populations developed in most of these polluted microcosms; however, the microbiota was severely impaired at the highest additions of Cr. Even though Cr was the most damaging metal in soil microcosms, if the soluble fractions of metals are considered instead of their total added amounts, the comparison among their toxic effects suggests a similar potential toxicity of Cr and Pb. Isolated multiresistant microorganisms were related mainly to Actinobacteria, Firmicutes and Ascomycota. Some of them showed the capacity to reduce Cr(VI) concentrations between 54 % and 70 % of the initial value. These strains were affiliated to several species of Streptomyces and Bacillus.

Conclusions

The combination of respirometric assays with molecular methods has been useful to assess the effect of metals on the soil microbial community, which can greatly be explained by their differential bioavailability. Cultivation-dependent and -independent approaches have proved the presence and development of multiresistant microorganisms in a previously unpolluted soil. Due to their properties, some of the isolated strains are potentially useful for soil bioremediation.     

Thrombocytopathia and Light-Chain Proteinuria in a Dog Naturally Infected With Ehrlichia canis

A 6–year-old dog was presented for evaluation of recurrent epistaxis. Platelet counts, biochemical tests, and coagulation tests were within the normal range, but a mucosal bleeding time was prolonged; there was hyperproteinemia and a monoclonal gammopathy. Heterogeneity of light chains appeared in urine, however, thus suggesting that the gammopathy was polyclonal. Platelet aggregation tests showed decreased responsiveness to collagen. An Ehrlichia canis indirect fluorescent-antibody titer was positive (1:40). Treatment with tetracycline, melphalan, and prednisone resulted in a rapid clinical improvement that persisted for at least 3 years.     

Carbon Isotope Discrimination, Gas Exchange and Stem Growth of Four Euramerican Hybrid Poplars under Different Watering Regimes

Seasonal changes in carbon isotope discrimination (Δ) and gas exchange traits were assessed in four Populus×euramericana clones differing in growth potential. Measurements were made during the second year after establishment in the field under two watering regimes, which were defined by the time-span between flood irrigations, hence resulting in different dry-down cycles: high irrigation (conservative schedule currently applied in the Ebro Valley, Spain) and low irrigation (equivalent to about a one-fourth reduction in water inputs). Net CO₂ assimilation rate (A), stomatal conductance (g_s), intrinsic water-use efficiency (A/g_s) and other related photosynthetic traits (leaf nitrogen concentration, leaf greenness and leaf mass per area) were measured prior to watering, and Δ was analysed in water-soluble leaf extracts (Δ_s) and bulk leaves (Δ_l). Stem growth was monitored over 3 years starting at the year of establishment (1998). Data were subjected to a repeated measures ANOVA over time for a randomised block split-plot design across watering regimes. Significant differences between watering regimes were detected using a long-term estimate of photosynthetic performance such as Δ_l, in agreement with changes in soil water status and evapotranspirative demand. However, the lack of significant genotype×watering regime interactions for gas exchange traits and Δ_s suggested that water shortage imposed by low irrigation was not sufficient to reveal physiological adaptations to drought. In this regard, the reduction in water inputs brought about by low irrigation did not reduce tree growth for any of the clones, suggesting that the current irrigation scheme employed in the region is superfluous to the water consumption needs of poplars. Genotypic variation was detected in gas exchange traits, Δ_s, Δ_l and stem growth under both watering treatments. Significant correlations with stem volume for Δ_s (r = −0.60, p<0.05) and A (r = + 0.61, p<0.05) suggested that growth was improved by higher water-use efficiency (the ratio of carbon fixed to water lost, as inferred by Δ_s) due to variation in A rather than in g_s. This observation corroborated the expectation derived from current theories that a lower Δ is related to higher stem volume, as a result of changes in net CO₂ assimilation rates.     

Preparative-scale synthesis of two metabolites isolated from soil treated with zoxium fungicide and kerb herbicide.

The preparation in multigram scale of two metabolites 3-(3,5-dichloro-4-methyl-benzoylamino)-2-hydroxy-3-methyl-pentanoic acid and 3-(3,5-dichloro-benzoylamino)-3-methyl-2-oxo-butyric acid isolated from soil treated with either Zoxium fungicide or Kerb herbicide was efficiently accomplished using a common 5-step synthetic process starting from easily available raw materials.     

Phenotypic diversity and delimitation between wild and cultivated forms of the genus <Emphasis Type="Italic">Pyrus</Emphasis> in North-eastern Spain based on morphometric analyses

We investigated morphological evidence that might allow wild Pyrus spp. to be distinguished from cultivated material (Pyrus communis L.) in the North-eastern Iberian Peninsula. 134 pear trees were identified in the wild and characterized by 13 quantitative and 13 qualitative leaf–shoot and fruit traits. The trees were visually classified into two preliminary groups of wild and cultivated material and discriminant functions, based on a reference collection for allocating individuals to one of the groups, were constructed. Both classifications were compared with a near-optimal numerical classification (the two-stage Ward-MLM strategy) using two criteria. The visual assignment of trees allocated 60% of trees to the wild group and 40% to the cultivated group. The overall discrepancy rate between the field classification and the discriminant analysis was low (17.4%). In general, wild individuals had smaller leaves, shorter petioles and more rounded and smaller fruits than their cultivated counterparts. They also had small-to-intermediate petiole widths, thorns on their shoots and straight or convex fruit profiles. However, the Ward-MLM strategy always formed better groups, in terms of the two criteria used, in all the continuous and categorical variables, for both leaf–shoot and fruit traits. Likewise, the agreement between classifications (discriminant analysis and Ward-MLM strategy) was only partial, with some Ward-MLM groups composed of both wild and cultivated material in similar proportions. This result suggests a limited success in identifying genuine wild individuals based on morphometric data, which can be ascribed either to poor phenotypic diversity and lack of distinguishing traits among species or to widespread crossability and subsequent development of hybrid/introgressant populations between wild and cultivated specimens.     

Direct quantitation of fatty acids present in bacteria and fungi: stability of the cyclopropane ring to chlorotrimethylsilane

The stability of the cyclopropane ring and the fatty acid composition of microbial cells were determined using chlorotrimethylsilane as reagent with three different conditions 80 degrees C for 1 h, 60 degrees C for 1 h, and 60 degrees C for 2 h. Chlorotrimethylsilane permits a simultaneous extraction and derivatization of fatty acids. A basic method was used as reference. The bacteria, Escherichia coli, Burkholderia cepacia, and Lactobacillus brevis, and fungi Aspergillus niger and Gibberella fujikuroi were used. The stability of the cyclopropane ring on acidic conditions was tested using the cyclopropanecarboxylic acid and a commercial mixture of bacteria fatty acid methyl esters (BAME). Fisher's least significant difference test showed significant differences among the methods. The method using chlorotrimethylsilane and 1-pentanol for 1 h at 80 degrees C gave the best results in cyclopropane, hydroxyl, and total fatty acid recoveries. This procedure allows the fast and easy one-step direct extraction derivatization.     

Assessment of heavy metal tolerance in two plant species growing in experimental disturbed polluted urban soil

Purpose

Urban soil, which is strongly influenced by anthropogenic activities, receives a major proportion of trace metal wastes. The aim of this work was to determine heavy metal concentration in (a) soil, to know the degree of the soil pollution; (b) roots and leaves of two plant species, Brassica juncea as an accumulator plant and Solanum lycopersicum as a crop plant; and (c) drainage water, to evaluate the heavy metal mobility.

Materials and methods

The study area is located in Sants, a neighborhood in Barcelona (Catalonia, Spain). Thirty kilograms of two representative soil depths (0–15 and 15–40 cm) was sampled and subsequently mixed. The two studied species were cultivated for 3 weeks in greenhouse conditions, and all pots were irrigated with water weekly to field capacity with a nutrient solution (pH = 6.5). If not otherwise stated, given results are means ± standard deviation of four replicated pots each with a composite sample of 12 individual plants per treatment. X-ray fluorescence (FRX) and diethylenetriaminepentaacetic acid soil extraction (DTPA) were used for total and available metal soil contents, respectively. Weekly cumulative drainage water of each pot was collected in polyethylene bottles and stored at 4 °C until analysis.

Results and discussion

The main pollutants are Cu, Pb, and Zn with topsoil total concentrations of approximately 1355, 2230, and 6239 mg kg^?1, respectively. The same soil elements for available fractions were slightly elevated (9.6, 5.8, and 6.7% of total concentration). The concentrations of Cu, Pb, and Zn in the plants’ leaves are greater in B. juncea than in S. lycopersicum. Furthermore, they are greater in the roots than in leaves. The Pb concentrations in a crop plant exceeded the 0.10 mg kg^?1 limit established for vegetables devoted for food in the European legislation. Unusually elevated concentrations of Pb (over 10 μg L^?1) were detected in the drainage water. These values exceeded the acceptable toxic concentrations in waters, according to the Spanish legislation.

Conclusions

The urban soil studied was highly contaminated by Cu, Pb, and Zn, and this pollution is more evident in the topsoil. A great part of these heavy metals was bioavailable for plants. Thus, the two plants (S. lycopersicum and B. juncea) had an ability to transport heavy metals from the roots to the shoots, especially for Zn. Great contents of heavy metals in the drainage water after the irrigation of plants were observed.