Molecular borromean rings

The realization of the Borromean link in a wholly synthetic molecular form is reported. The self-assembly of this link, which is topologically achiral, from 18 components by the template-directed formation of 12 imine and 30 dative bonds, associated with the coordination of three interlocked macrocycles, each tetranucleating and decadentate overall, to a total of six zinc(II) ions, is near quantitative. Three macrocycles present diagonally in pairs, six exo-bidentate bipyridyl and six endo-diiminopyridyl ligands to the six zinc(II) ions. The use, in concert, of coordination, supramolecular, and dynamic covalent chemistry allowed the highly efficient construction, by multiple cooperative self-assembly processes, of a nanoscale dodecacation with an approximate diameter of 2.5 nanometers and an inner chamber of volume 250 A(3), lined with 12 oxygen atoms.     

Modulation of alpha-thrombin function by distinct interactions with platelet glycoprotein Ibalpha

Thrombin bound to platelets contributes to stop bleeding and, in pathological conditions, may cause vascular thrombosis. We have determined the structure of platelet glycoprotein Ibalpha (GpIbalpha) bound to thrombin at 2.3 angstrom resolution and defined two sites in GpIbalpha that bind to exosite II and exosite I of two distinct alpha-thrombin molecules, respectively. GpIbalpha occupancy may be sequential, as the site binding to alpha-thrombin exosite I appears to be cryptic in the unoccupied receptor but exposed when a first thrombin molecule is bound through exosite II. These interactions may modulate alpha-thrombin function by mediating GpIbalpha clustering and cleavage of protease-activated receptors, which promote platelet activation, while limiting fibrinogen clotting through blockade of exosite I.     

Detection of disease in stored potatoes by volatile monitoring

The feasibility of early disease detection in potato storages by the monitoring of volatiles was investigated usingErwinia carotovora as a model storage pathogen (soft rot) in both laboratory and commercial site tests. Volatiles were collected by cryogenic air liquefaction and concentrrated on Tenax-GC adsorbent. Analyses by gas chromatography and mass spectroscopy identified acetone, ethanol, and 2-butanone being produced in abnormal concentrations during host-soft rot incubations in a controlled environment. Preliminary comparisons between diseased and normal commercial bins at different storage sites (two cultivars) indicated soft rot infection also created abnormally high concentrations of the above three volatiles, with most notable differences in 2-butanone concentrations. The criteria of selection for volatiles for possible use as incipient disease indicators are discussed in terms of the composite rate of pathogenic destruction within a potato pile. Additional volatiles identified from potatoes inoculated withE. carotovora include: acetaldehyde, methyl acetate, ethyl acetate, propanethiol, hydrogen sulfide, methyl sulfide, methyl disulfide, n-propanol, and isobutanol.     

Characterisation of Non-Autoinducing Tropodithietic Acid (TDA) Production from Marine Sponge Pseudovibrio Species

The search for new antimicrobial compounds has gained added momentum in recent years, paralleled by the exponential rise in resistance to most known classes of current antibiotics. While modifications of existing drugs have brought some limited clinical success, there remains a critical need for new classes of antimicrobial compound to which key clinical pathogens will be naive. This has provided the context and impetus to marine biodiscovery programmes that seek to isolate and characterize new activities from the aquatic ecosystem. One new antibiotic to emerge from these initiatives is the antibacterial compound tropodithietic acid (TDA). The aim of this study was to provide insight into the bioactivity of and the factors governing the production of TDA in marine Pseudovibrio isolates from a collection of marine sponges. The TDA produced by these Pseudovibrio isolates exhibited potent antimicrobial activity against a broad spectrum of clinical pathogens, while TDA tolerance was frequent in non-TDA producing marine isolates. Comparative genomics analysis suggested a high degree of conservation among the tda biosynthetic clusters while expression studies revealed coordinated regulation of TDA synthesis upon transition from log to stationary phase growth, which was not induced by TDA itself or by the presence of the C10-acyl homoserine lactone quorum sensing signal molecule.     

A preliminary watershed scale soil quality assessment in north central Iowa, USA

Soil quality assessment has been recognized as an important step toward understanding the long-term effects of conservation practices within agricultural watersheds. Our objective was to assess soil quality within the South Fork watershed of the Iowa River using various indicators and assessment approaches. Soil samples were collected during 2003 and 2004 from 29 areas of 32 ha (80 acres) each along two transects traversing the watershed. Soil pH, Mehlich III extractable P, K, Ca and Mg, electrical conductivity (EC), total organic carbon (TOC), and total N (TN) were measured. The Soil Management Assessment Framework (SMAF) was used to compute a soil quality index (SQI), while soil loss, the soil tillage intensity rating (STIR), N-leaching potential, and soil conditioning index (SCI) were determined for each sampling area using the 2003 version of the Revised Soil Loss Equation (RUSLE2). Overall, there were no soil fertility limitations within the watershed based on an average pH of 6.96 and extractable P and K levels of 36 and 162 mg kg⁻¹, respectively. Soil loss, STIR, N-leaching, and SCI averaged 1.13 Mg ha⁻¹, 68, 3, and 0.4, respectively. The SMAF analysis indicated soils within the watershed were functioning at 87% of their full potential. The lowest indicator score was associated with TOC (0.60) because the average value was only 28.4 g kg⁻¹. The SCI and SQI indices were positively correlated although since it used measured data, the SMAF appears to provide more information about the effects of management practices within the watershed. Soils in upper landscape positions had lower TOC and C:N ratios indicating an increased risks for both erosion and for nitrate leaching. Management of soils on hilltops may be the most effective way to minimize N and P losses within the watershed.     

Impacts of weaning age on dietary needs of whey permeate for pigs at 7 to 11 kg body weight

Background:Whey permeate is an effective lactose source for nursery pigs and the most benefits are obtained when pigs are at 7 to 11 kg BW.Altering weaning ages could cause different length of early-weaner phases until 7 kg BW and thus it would influence the dietary need of whey permeate during 7 to 11 kg BW of pigs.This study aimed to evaluate if weaning ages would affect the dietary needs of whey permeate for optimum growth performance of pigs at 7 to 11 kg BW.Methods:A total of 1,632 pigs were weaned at d 21(d 21.2±1.3)or d 25(d 24.6±1.1)after birth.All pigs had a common early-weaner feeds until they reached 7 kg BW.When pigs reached 7 kg BW within a weaning age group,they were allotted in a randomized complete block design(2×4 factorial).Two factors were weaning age groups(21 and 25 d of age)and varying whey permeate levels(7.50%,11.25%,15.00%,and 18.75%).Data were analyzed using the GLM and NLIN procedures of SAS for slope-ratio and broken-line analyses to determine the growth response to whey permeate and optimal daily whey permeate intake for the growth of the pigs weaned at different ages.Results:Pigs weaned at 21 d of age had a common diet for 11 d to reach 7 kg BW whereas pigs weaned at 25 d of age needed 2 d.The G:F of pigs weaned at 25 d of age responded to increased daily whey permeate intake greater(P<0.05)than pigs weaned at 21 d of age.Breakpoints were obtained(P<0.05)at 88 and 60 g/d daily whey permeate intake or 17.0%and 14.4%of whey permeate for G:F of pigs weaned at 21 and 25 d of age,respectively.Conclusion:Pigs weaned at an older age with a short early-weaner phase had a greater growth response to whey permeate intake compared with pigs weaned at a younger age with a long early-weaner phase.Altering weaning ages affected dietary needs of whey permeate for optimum growth performance of pigs from 7 to 11 kg BW.