The evolutionary relationship between bere barley and other types of cultivated barley

Genetic Resources and Crop Evolution - We used genotyping-by-sequencing to investigate the evolutionary history of bere, the oldest barley variety still cultivated in Britain and possibly in all of...     

Electron-dense particles in wood decayed by Ganoderma applanatum

Summary Hemlock sawdust samples degraded by Ganoderma applanatum showed no electron-dense particles either in hyphae or in wood cell walls after aldehyde/OsO₄ fixation. After KMnO₄ fixation at early stage of attack, particles were in hyphae, hyphal sheath and wood cell walls. In samples prepared by a cytochemical technique which localizes cellulase activity at the ultrastructural level, particles were in hyphae, hyphal sheath and wood cell walls. The smallest diameter range of the particles lay between 3 and 7 nm which corresponds to the size of cellulases. Larger diameter particles were peresent which are probably aggregates of the smaller units. We believe that particles present in hyphal cytoplasm and hyphal sheath are cellulolytic enzymes. Whether particles present in attacked wood cell walls are enzymes or degradation products cannot be determined by this study. Nevertheles, the particles reveal the decay pattern in wood by the white-rot fungus G. applanatum.     

Habitat use of a coastal delphinid population investigated using passive acoustic monitoring

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The mineralogy and potassium supplying power of some loessial and related soils of New Zealand

Sixteen Pallic (Aqualfs, Ustalfs, Aquepts, Ochrepts) and related soils collected from the North and South Islands of New Zealand were studied to determine if variations in nonexchangeable K supply could be explained by mineralogical composition. A strong relationship was found which indicates that mica is weathering to vermiculite. Proportions of vermiculite and kandite are generally higher in the North Island than in the South Island. Dominance of either micas or vermiculite or kandite is determined by the stage of weathering and/or the nature of parent materials. Soils that supplied more nonexchangeable K (K_nex) to ryegrass plants contained more mica in the clay fraction than soils that supplied less K_nex. The results confirmed that use of a soil test that includes a measure of K_nex (i.e. acid-extractable K) may be a vital part of identifying variations in plant available K status of the soils. It is concluded that the K supplying power of the Pallic and related soils is related directly to the amounts of mica present in clay fraction and that good K supplying soils will be transformed to K depleted soils as a result of increased weathering and leaching (pedogenic factors) and K exploitation in intensive farming systems.     

In situ hybridization for the detection of rust fungi in paraffin embedded plant tissue sections

Background

Rust fungi are obligate pathogens with multiple life stages often including different spore types and multiple plant hosts. While individual rust pathogens are often associated with specific plants, a wide range of plant species are infected with rust fungi. To study the interactions between these important pathogenic fungi and their host plants, one must be able to differentiate fungal tissue from plant tissue. This can be accomplished using the In situ hybridization (ISH) protocol described here.

Results

To validate reproducibility using the ISH protocol, samples of Chrysanthemum × morifolium infected with Puccinia horiana, Gladiolus × hortulanus infected with Uromyces transversalis and Glycine max infected with Phakopsora pachyrhizi were tested alongside uninfected leaf tissue samples. The results of these tests show that this technique clearly distinguishes between rust pathogens and their respective host plant tissues.

Conclusions

This ISH protocol is applicable to rust fungi and potentially other plant pathogenic fungi as well. It has been shown here that this protocol can be applied to pathogens from different genera of rust fungi with no background staining of plant tissue. We encourage the use of this protocol for the study of plant pathogenic fungi in paraffin embedded sections of host plant tissue.

     

Requirement for cotolerogenic gene products in the clonal deletion of I-E reactive T cells

T cells that express the T cell receptor V beta 5.2 domain react with the class II major histocompatibility complex (MHC) molecule I-E, and V beta 5.2+ T cells are deleted in mouse strains that express I-E glycoproteins. By examination of genetically defined recombinant inbred (RI) mouse strains, it was found that the deletion was dependent on the expression of I-E and one of a limited number of non-MHC gene products (cotolerogens). The gene encoding one of these cotolerogens maps to chromosome 12 and is linked to the endogenous provirus Mtv-9. These observations suggest that the I-E-mediated and minor lymphocyte-stimulating antigen (Mls)-mediated deletions of alpha beta T cells from the repertoire are similar; both require the expression of a class II MHC glycoprotein and a second non-MHC gene product.