Implications of using an average relationship matrix in genetic evaluation for a population using multiple-sire matings

SUMMARY: Ambiguous paternity can be incorporated into the mixed model equations (MME) by including the average numerator relatinship matrix (average A), which averages the true sire-offspring relationship over the putative sires. A previous study has shown that some overestimation of genetic trend results from this substitution. A population of 40 breeding females and 2 breeding males was simulated 1,000 times with either random mating or sequential selection continuing for 8 breeding cycles. In the selection case candidates were ranked on estimated breeding values (EBVs) calculated from the MME with an animal model and the average A. Variances of the EBVs and prediction errors were computed. The results showed the average A incorrectly perceives both the variance of family sizes among males and the variance loss due to selection to be smaller. This will lead to an overestimation of genetic trend. ZUSAMMENFASSUNG: Folgerungen aus der Anwendung einer durchschnittlichen Verwandtschaftsmatrix bei der Zuchtwertsch?tzung für eine Population mit mehreren V?tern in einer Paarungsgruppe In den Mischmodellgleichungen kann eine unklare v?terliche Abstammung durch die Verwendung einer durchschnittlichen Verwandtschaftsmatrix, die die Abstammung zu gleichen Teilen über die m?glichen V?ter aufteilt, berücksichtigt werden. Eine frühere Arbeit hat gezeigt, da? diese Ma?nahme zu einer gewissen übersch?tzung des genetischen Fortschritts führt. Eine Population mit 40 weiblichen und 2 m?nnlichen Tieren wurde 1000mal über 8 Paarungsperioden simuliert und zwar mit und ohne gerichteter Selektion. Im Falle der Selektion wurden die Tiere aufgrund der mit einem Tiermodell und der durchschnittlichen Verwandtschaftsmatrix gesch?tzten Zuchtwerte geordnet. Die Varianzen der Zuchtwerte und der Sch?tzfehler wurden berechnet. Die Ergebnisse zeigen, da? durch eine durch-schnittliche Verwandtschaftsmatrix die Varianz der Gr??e der Nachkommensgruppen der V?ter und der Verlust an genetischer Varianz aufgrund der Selektion untersch?tzt wird. Dies führt zu einer übersch?tzung des genetischen Fortschritts.     

Variation of the growth hormone gene in ryr 1 genotyped Austrian pig breeds

SUMMARY: Polymorphism in the second intron of the porcine growth hormone gene of 273 Austrian Landrace and 81 Austrian Edelschwein pigs was investigated with a PCR-RFLP-technique. Results showed significantly different genotype patterns between the two breeds. The frequency of the Hae II(-) allele was significantly (P < 0,001) higher in the landrace than in the Edelschwein population (0,83 and 0,47 resp.). The Msp I(+) allele was predominant in both breeds but signifanctly higher in the Landrace (0,98 versus 0,69; P < 0,01). Analyses the Hae II/Msp I locus combination revealed also in breed specific difference. In the Landrace a very low interaction was found between the Hae II and ryr 1 locus, and between Msp I and ryr 1 locus (c. c. = 0,181 and 0,186 resp.). The correlation was slightly stronger (c. c. = 0,266) between the ryr 1 and Hae II/Msp I genotypes. No correlation was detected among the three loci in the Edelschwein population. ZUSAMMENFASSUNG: Variabilit?t des Somatotropin Gens in ?sterreichischen Schweinerassen genotypisiert hinsicbtlich ryr 1 An 273 ?sterreichischen Landrasse Schweinen und 81 ?sterreichischen Edelschweinen wurde der Polymorphismus am zweiten Intron des Schweinewachstumshormons mittels PCR-RFLP-Technik untersucht. Genotypen-und Genfrequenzen waren zwischen den beiden Rassen signifikant verschie- den. Die Hae II(-) Allelfrequenz war bei den Landrassetieren signifikant h?her (P < 0,001) als bei den Edelschweinen (0,83 bzw. 0,47). In beiden Rassen überwiegte das Msp I(+) Allel, das aber signifikant ?fters bei der Landrasse auftrat (0,98 bzw. 0,69; P < 0,01). Die Verteilung der Locuskombination von Hae II/Msp I zwischen den beiden Rassen war ebenfalls unterschiedlich. Bei der Landrasse konnte nur ein sehr geringer Zusammenhang zwischen dem Hae II und ryr 1 Locus (c. c. = 0,181 bzw. 0,186) und auch zwischen dem Msp I und ryr 1 Locus festgestellt werden. Die Korrelation zwischen dem ryr 1 und Hae II/Msp I Genotyp war geringfügig gr??;er (c. c. = 0,266). Bei den Edelschweinen konnte kein Zusammenhang zwischen den drei untersuchten Loci festgestellt werden.     

Effects of Neem Seed Derivatives on Brown Planthopper Symbiotes

Populations of intracellular symbiotes declined significantly in brachypterous females of the brown planthopper,Nilaparvata lugens (Stål), which were stressed during nymphal development by caging them on IR20 rice plants treated with 3% neem oil, 5% neem seed kernel aqueous extract, or 10% neem cake aqueous extract. In addition, nymphs grew poorly and symbiote populations in prospective females declined, when reared on rice plants grown in soil treated with neem cake; this indicates systemic action of bioac-tive neem constituents. Addition of custard-apple oil to neem oil did not enhance the inhibitory effects. The effects of neem derivatives on the symbiotes may be either host-mediated — possibly through disturbed neuroendocrine homeostasis, or direct — leading to perturbations of host-symbiote equilibrium.     

Isolation of chicken anaemia virus from broiler chickens in New Zealand

Chicken anaemia virus was isolated for the first time in New Zealand from the New Zealand domestic chicken population. The virus was recovered from diseased birds in five separate flocks of broiler chickens aged between 14 and 33 days of age. Six isolates were obtained from bone marrow and lymphoid tissues using the MDCC-MSB1 cell line derived from Marek's disease lymphoma. All isolates were resistant to chloroform and survived exposure to 70 degrees C for 5 minutes. The main clinical features consistently associated with the disease outbreaks were increased mortality, yolk sac infections, sub-cutaneous haemorrhages and atrophy of the thymus. Fungal pneumonia occurred in two flocks, and gangrenous dermatitis as a result of bacterial infection in another flock. Microscopic examination showed atrophy of the thymus, reduced medullary haematopoiesis and inflammation resulting from secondary infections.     

Prevalence and spatial distribution of bovine tuberculosis in brushtail possums on a forest-scrub margin

Tuberculosis caused by Mycobacterium bovis was diagnosed in 36 of 68 (53%) brushtail possums (Trichosurus vulpecula) trapped in August 1992 from a population of exceptionally low density (trap catch <3%) on a forest-scrub margin in Westland, New Zealand. The prevalence of tuberculosis in possums, based solely on gross lesions, was at least twice that previously recorded in New Zealand, and was about seven times that recorded from the same population in 1980. More male (66%) than female (33%) possums had grossly visible tuberculous lesions. The distribution of infection appeared continuous along the forest-scrub margin. Both stoats (Mustela erminea) and one of six hares (Lepus europaeus occidentalis) trapped were also infected with M. bovis.     

Pathogenic mechanisms of caprine arthritis-encephalitis virus

Goats infected with caprine arthritis-encephalitis virus (CAEV) show chronic arthritis and cachexia, which are progressive in nature. The immunopathogenic mechanisms responsible for these progressive clinical symptoms have not been fully elucidated. Various haematological and immunological parameters were evaluated in experimentally-infected goats showing typical signs of CAEV-induced disease. Infected goats showed recurrent lymphocytosis that may be due to constant presentation of antigen by infected cells of a monocyte/macrophage lineage. The serum alkaline phosphatase and -glutamyl transferase concentrations were elevated in infected goats, a characteristic of hepatic and bone disorders. All other serum chemistry parameters were similar between infected and control goats. Importantly, the serum tumour necrosis factor- (TNF-) levels were higher in infected goats. The cachexia seen in infected goats may be at least partly due to altered metabolism as a result of prolonged elevation of serum TNF- levels. Depressed natural killer cell activity was observed in infected goats and may contribute towards the establishment of a persistent infection with CAEV.Abbreviations AIDS acquired immunodeficiency syndrome - CAEV caprine arthritis-encephalitis virus - GGT -glutamyl transferase - HBSS Hanks' balanced salt solution - HIV human immunodeficiency virus - NK natural killer - PBMC peripheral blood mononuclear cells - PCR polymerase chain reaction - SAP serum alkaline phosphatase - TNF tumour necrosis factor     

A formal method of determining the dietary amino acid requirements of laying‐type pullets during their growing period

1. The amino acid requirements of laying type pullets during the growing period can be estimated by measuring the growth of different components of the body and making use of nutritional constants that define the amount of each amino acid that is required for the production of the tissues being formed.

2. In this experiment, carcase analyses of each of three breeds of pullets were conducted at weekly intervals throughout the growth of the pullets, to 18 weeks of age. Measurements were made of body weight, gut‐fill and feather weight, and chemical analyses consisted of water, protein, lipid and ash measurements of both the body and the feathers. Each age group comprised 10 birds of each breed.

3. Gompertz functions accurately estimated the growth of both body protein and feather protein, to 18 weeks of age, from which the rate of growth of these two components of the body could be estimated. The mature weight of pullets was overestimated by the Gompertz growth curve, which may indicate that a pullet ceases to increase in body protein content once sexual maturity has been reached.

4. Using allometric relationships between the chemical components of the body and of feathers, all the components of growth could be estimated from the growth of body protein and feather protein. These components were then added together to determine the growth rate of the body as a whole.

5. The daily amino acid requirements for 4 functions were calculated, namely, those for the maintenance of body protein and feather protein, and for the gain in body protein and feather protein. These requirements were then summed to determine the requirement of pullets on each day of the growing period.

6. Using the ‘effective energy’ system, the amount of energy required by these pullets was calculated for each day of the growing period, from which the desired daily food intake of the pullets could be predicted. By dividing the amino acid requirement by this daily food intake it was possible to determine the concentration of amino acids that would be needed in the diet in order to meet the requirements of a pullet.

7. The results indicate that the ratio between the requirement for lysine and for methionine and cysteine changes dramatically during the growing period, negating the concept of a fixed ratio between all the amino acids during growth.

8. The above process is the first step in determining the optimal feeding programme for a population of pullets of a given genotype. The constraining effects, of the diet being offered and of the environment in which the pullets are housed, on the food intake and growth rate of each pullet have to be estimated, and such a theory can then be expanded to include all the individuals in the population. Only by the use: of simulation models can all these constraining effects be considered simultaneously.     

Chylous effusions revisited

Varying terms and criteria have been used in the veterinary literature to characterize milky opaque pleural effusions through the years. This article addresses ideas widely repeated in the veterinary and human literature upon which time, experience, diagnostic techniques, experimental data, and improved understanding of pathogenesis have cast doubt. Topics discussed include terminology, pathogenesis of chylous and pseudochylous effusions, criteria for differentiation of chylous from pseudochylous effusions, and clinicopathologic changes associated with drainage of chylous effusions.