Proteome profiling of the compatible interaction between wheat and stripe rust

Over the last decade, comparative molecular profiling studies between compatible and incompatible plant-pathogen interactions have shown that susceptible response of the host to a pathogen requires factors that promote disease development. In this study, we examined proteome profiles during a compatible interaction between wheat and stripe rust. A 2D-LC system (ProteomeLab PF2D) was used for protein separation and to compare the proteome from infected and control samples. More than 700 protein peaks at each time point were compared between pathogen- and mock-inoculated samples. Selected proteins, with significant differences in abundance were identified by nanoLC-ESI- MS/MS and generated spectra were searched against the wheat protein databases from UniProt, and NCBI and the Puccinia database from The Broad Institute. In total, the identified proteins comprised of 62 % wheat and 38 % Pst proteins. All identified proteins were searched by bioinformatics-based algorithms to detect their subcellular localization and signal peptide motifs which have the potential to catch the candidate effector proteins. The wheat proteins were classified based on their function. Although a compatible interaction, many wheat proteins, such as antioxidants, PRs and cold-responsive proteins, are implicated in defense and stress tolerance. On the pathogen side, 64 proteins were identified, and included some important pathogenicity proteins that can play role in pathogen virulence and suppress the host defense. In addition, we discovered that nine proteins have a signal sequence and three of the hypothetical fungal proteins, PGTG_11681T0, PGTG_07231T0 and CBH50687.1, have been tentatively identified as candidate effectors.     

Binding profiles and cytokine-inducing effects of fish rhamnose-binding lectins on Burkitt’s lymphoma Raji cells

Rhamnose-binding lectin (RBL) is one of the animal lectin categories which take part in the innate immune responses of fish. Osmerus lanceolatus lectin (OLL) from shishamo smelt eggs is an RBL composed of two tandem-repeated domains, both of which are considered to be a carbohydrate-recognition domain. SAL, catfish (Silurus asotus) egg RBL composed of three domains, binds to Burkitt’s lymphoma Raji cells through globotriaosylceramide (Gb3) carbohydrate chain and to reduce cell size and growth by altering membrane composition without causing cell death. In this experiment, we tried to compare the binding effects of these two RBLs on Raji cells. Flow cytometric and fluorescence microscopic analyses revealed that OLL also directly bound to and shrunk Raji cells with ten times less reactivity than SAL but reduced cell growth with decreasing cell viability. Anti-Gb3 antibody completely blocked the binding of SAL to Raji cells but not that of OLL. In addition, the direct bindings of OLL and SAL to Raji cells were comparably inhibited by melibiose, but lactose was more effective inhibitor for the binding of OLL than that of SAL. These results suggest that OLL has slightly different cell-binding property compared with SAL and binds not only to Gb3 but also to the other carbohydrate receptor-bearing β-galactoside chains. The quantitative RT-PCR analysis revealed that SAL induced the expression of TNF-α but not of IFN-γ, IL-1β, and IL-10. Thus, SAL-induced cytostatic effect on Raji cells might be partially caused by TNF-α-mediated signaling pathway.     

Effects of vitamin and mineral premix withdrawal from diets on carcass and meat quality of feedlot steers

Tropical Animal Health and Production - The primary objective of the present study was to assess the effects of vitamin and mineral premix (VMP) withdrawal from the diets 30 and 60 days...     

Effect of melatonin on regulation of apoptosis and steroidogenesis in cultured buffalo granulosa cells

This study was aimed to address melatonin receptor expression, mRNA level of hypothalamus and hypophysis hormone receptors (GnRHR, FSHR, and LHR), steroidogenesis, cell cycle, apoptosis, and their regulatory factors after addition of melatonin for 24 hr in cultured buffalo granulosa cells (GCs). The results revealed that direct addition of different concentrations of melatonin (100 pM, 1 nM, and 100 nM) resulted in significant upregulation (p < 0.05) of mRNA level of melatonin receptor 1a (MT1) without affecting melatonin receptor 1b (MT2). Melatonin treatment significantly downregulated (p < 0.05) mRNA level of FSH and GnRH receptors, whereas 100 nM dose of melatonin significantly increased mRNA level of LH receptor. Treatment with 100 nM of melatonin significantly decreased the basal progesterone production with significant decrease (p < 0.05) in mRNA levels of StAR and p450ssc, and lower mRNA level of genes (Insig1, Lipe, and Scrab1) that affect cholesterol availability. Melatonin supplementation suppressed apoptosis (100 nM, p < 0.05) and enhanced G2/M phase (1 nM, 100 nM, p < 0.05) of cell cycle progression which was further corroborated by decrease in protein expression of caspase‐3, p21, and p27 and increase in bcl2. Our results demonstrate that melatonin regulates gonadotrophin receptors and ovarian steroidogenesis through MT1. Furthermore, the notion of its incorporation in apoptosis and proliferation of buffalo GCs extends its role in buffalo ovaries.     

Cd and Nutrient Elements Release into Various Aqueous Solutions from Synthesized K-Struvite Fertilizer

K-struvite (potassium magnesium phosphate, KMgPO₄.6H₂O) is a promising multinutrient slow-release fertilizer; however, it may contain cadmium (Cd) in significant ranges like other phosphorus (P) fertilizers. This paper focuses on dissolution of a synthesized K-struvite in water, acid solutions and complexing agents. Firstly, K-struvite was synthesized by using Cd containing phosphoric acid (H₃PO₄). After its characterization, a three-stage dissolution study was carried out. The release of nutrient elements and Cd into extracts was studied. Phosphorus (P) and potassium (K) solubilities in pure water are low, not more than about 2.5% at the end of three extractions. It was found that solubility increased with the presence of mineral and organic acids. The presence of complexing agents also enhanced the dissolution of K-struvite. At the end of three extractions, citric acid (CA, C₆H₈O₇.H₂O) solution solubilized P about 38%, while dissolved K was about 35%, in cumulative. In the case of 0.001 mol/L Na₂EDTA (C₁₀H₁₄N₂Na₂O₈.2H₂O), the solubilized K-struvite was found to be about 40%, which was about 14% in a 250 mg/L Na-humate. The maximum concentrations of Cd in the third extracts of hydrochloric acid (HCl), CA, oxalic acid (OA, C₂H₂O₄) and Na₂EDTA were measured to be in the range of about 14–19 μg/L, which corresponds to a Cd solubilization more than 46% for the three successive extractions.     

Antifungal and antitermitic activities of wood vinegar from oil palm trunk

We evaluated the antifungal and antitermite activities of wood vinegars produced from oil palm trunk. The wood vinegars were produced at three different pyrolysis temperatures, 350, 400, and 450 °C. Antifungal activities of vinegars were evaluated using a Petri dish bioassay with 0.5, 1.0, and 1.5% (v/v) against a white-rot fungus, Trametes versicolor, and a brown-rot fungus, Fomitopsis palustris. Antitermite activities were tested using a no-choice bioassay method for Coptotermes formosanus with 2.5, 5.0, 7.5, and 10.0% (v/v). All the wood vinegars exhibited antifungal activities against T. versicolor. In particular, the wood vinegar produced at 350 °C resulted in complete inhibition of T. versicolor growth at 1.0 and 1.5%. However, higher concentrations were required to obtain growth inhibition of F. palustris. All the wood vinegars exhibited antitermite activity to C. formosanus workers in the no-choice experiment at relatively high concentrations. For instance, 10% concentration was required to achieve 100% mortality against C. formosanus at all production temperatures. The lowest mass loss of the treated filter paper of 11.75% was obtained with a 350 °C—10.0% combination.     

基于WorldView-2影像的土壤含盐量反演模型

针对WorldView-2影像高空间分辨率评价其定量反演土壤含盐量的能力,以盐渍化现象较为明显的新疆克里雅河流域为研究对象,基于WorldView-2影像和实测高光谱数据,利用偏最小二乘回归(partial least squares regression,PLSR)和BP人工神经网络(back propagation artificial neural networks,BP ANN)方法建立定量反演该流域土壤含盐量模型并做出研究区高空间分辨率土壤含盐量分布图。结果表明:1)利用实测高光谱数据和影像数据分别建立的2种模型中BP神经网络模型预测精度都高于PLSR模型,其中基于影像数据建立的6:8:1结构的3层BP神经网络模型决定系数R2、均方根误差RMSE、相对分析误差RPD分别为0.851、0.979、2.337,模型的稳定性和预测能力都优于PLSR模型(R2、RMSE、RPD分别为0.814、1.139、2.007)。2)利用WorldView-2影像提高了土壤含盐量制图的空间分辨率,归一化植被指数NDVI和比例植被指数RVI较有效降低了植被覆盖与土壤水分对预测精度的影响。该文建立的考虑植被覆盖与土壤水分定量反演土壤含盐量的模型不需要复杂的参数,一定程度上满足了干旱、半干旱地区的盐渍化监测需求,可以促进WorldView-2等高空间分辨率卫星在盐渍化监测中的进一步应用。     

Antibodies to Schmallenberg virus in domestic livestock in Turkey

This, partly retrospective study, was designed to determine the seroprevalence of Schmallenberg virus (SBV), a new Orthobunyavirus first reported in Germany in late 2011, in domestic ruminants from the Middle Black Sea, West, and Southeast regions of Turkey. An indirect enzyme-linked immunosorbent assay was used to screen serum samples collected from slaughterhouse animals between 2006 and 2013. The overall seroprevalence was 335/1,362 (24.5 %) with 325/816 (39.8 %), 5/307 (1.6 %), 3/109 (2.8 %), and 2/130 (1.5 %) recorded in cattle, sheep, goats, and Anatolian water buffalo, respectively. This is the first study to demonstrate the presence of antibodies to SBV in Turkish ruminants; it indicates that cattle are more susceptible to infection than sheep, goats, or buffalo and that exposure of domestic ruminants to SBV in Turkey may have occurred up to 5 years prior to the first recorded outbreak of the disease in 2011.     

Antibacterial activity and cytotoxicity of Miliusa velutina.

Goniothalamusin and two mixtures, acetogenins-A and acetogenins-B, isolated from a petroleum ether extract of the stem bark of Miliusa velutina exhibited significant antibacterial and cytotoxic activities.     

The economics of sutchi catfish (Pangasianodon hypophthalmus) aquaculture under three different farming systems in rural Bangladesh

This paper examines production costs and returns of sutchi catfish (Pangasianodon hypophthalmus) aquaculture under three different farming systems in Bangladesh. Based on the production technology, sutchi catfish farming is classified as extensive, semi‐intensive and intensive. Results showed that sutchi catfish farming is profitable irrespective of the level of intensification and in all three instances the cost of feed dominated the variable costs of production. The average annual production costs were estimated at US$5217 ha^?1 in intensive farming, while US$2694 ha^?1 in semi‐intensive and US$981 ha^?1 in extensive farming. Despite the higher production costs per hectare, the average annual net return was higher in intensive farming (US$3364), compared with semi‐intensive (US$2048) and extensive (US$1099) farming. The average annual production per hectare under intensive farming conditions (13 945 kg) was higher than semi‐intensive (7705 kg) and extensive (3380 kg) farming mainly due to higher levels of inputs, including seed, feed, fertilizer and labour. However, the Cobb–Douglas production function model suggests that inputs are inefficiently used in the intensive farming system. Conversely, there is enough scope to increase the production and income from the semi‐intensive and extensive farming systems by using more inputs.