Exploring National Veterinary Information Outreach

The Medical Sciences Library at Texas A&M University (MSL) participates in the National Library of Medicine (NLM) National Network of Libraries of Medicine South Central Region (NN/LM) Regional Resource Library outreach initiative. This program generally funds regional outreach activities promoting NLM information resources. The MSL and veterinary library community recognized practicing clinical veterinarians as an underserved population. The 2013–2014 MSL outreach proposal combined traditional activities with the development of materials to assist veterinarians with NLM resources, and exhibit to a national audience. This article provides an overview of the NN/LM SCR Resource Library Outreach Awards, an overview of MSL outreach activities for the year, and lessons learned.     

Sampling and monitoring of biogenic emissions by eucalyptus leaves using membrane extraction with sorbent interface (MESI)

Membrane extraction with sorbent interface (MESI) has been applied to monitor plant fragrance volatiles emitted into indoor air. The main components of the MESI system are a membrane module and a trap, which can be connected directly to a GC or GC-MS for simultaneous multicomponent extraction and monitoring. A polydimethylsiloxane (PDMS) membrane and two different traps, PDMS and Tenax, as well as a DC current supply for trap desorption have been applied in this research. After the membrane module is placed in contact with the plant, the MESI/GC-MS provides semicontinuous characterization of volatile compounds emitted. The MESI device has been applied to monitor the biogenic volatile organic compounds released during the first 8 h after a branch was cut from a Eucalyptus dunnii tree. The study demonstrates that the MESI system is a simple and useful tool for monitoring changes in emission processes as a function of time.     

Surveying soil faunal communities using a direct molecular approach

Soil faunal communities are often phylogenetically diverse and the accurate assessment of the taxonomic structure of these communities is both time-consuming and requires a high level of taxonomic expertise. Here we describe a DNA sequence-based methodology for characterizing soil micro- and mesofaunal communities that is similar to the molecular approaches commonly used to survey soil microbial diversity. The technique involves the direct extraction of faunal DNA from soil, PCR amplification of the extracted DNA with metazoan-specific primers, followed by the construction of clone libraries and direct sequencing of individual PCR products. We used this technique to characterize micro- and mesofaunal community composition from six individual soils representing two land-use types. The technique captured the more abundant faunal groups in the soils (nematodes, Collembola, Acari, tardigrades, enchytraeids) and provided sufficient taxonomic resolution to describe the overall structure of the communities. We compared the results obtained using this molecular approach to results obtained using a traditional, microscopy-based approach and found that the results were broadly similar. However, since biases are inherent in both methods it remains unclear which method provides a more accurate assessment of soil faunal community composition. Although this molecular approach has some distinct disadvantages over the more widely-used direct extraction methods, one advantage is that the taxonomic identification it can provide will be more accurate and consistent across research groups, facilitating effective comparisons of mesofaunal surveys.     

Denitrification potential of intermittently saturated floodplain soils from a subtropical perennial stream and an ephemeral tributary

Denitrification has the potential to remove excess nitrogen from groundwater passing through riparian buffers, thus improving water quality downstream. In regions with markedly seasonal precipitation, transient stream flow events may be important in saturating adjacent floodplain soils and intermittently providing the anaerobic conditions necessary for denitrification to occur. In two experiments we characterised the denitrification potential of soils from two contrasting floodplains that experience intermittent saturation. We quantified under controlled laboratory conditions: 1) potential rates of denitrification in these soils with depth and over time, for a typical period of saturation; and 2) the influences on rates of nitrate and organic carbon. Treatments differed between experiments, but in each case soil-water slurries were incubated anaerobically with differing amendments of organic carbon and nitrate; denitrification rates were measured at selected time intervals by the acetylene-block technique; and slurry filtrates were analysed for various chemical constituents. In the first experiment (ephemeral tributary), denitrification was evident in soils from both depths (0-0.3 m; 0.3-1.1 m) within hours of saturation. Before Day 2, mean denitrification rates at each depth were generally comparable, irrespective of added substrates; mean rates (Days 0 and 1) were 5.2 ± 0.3 mg N kg dry soil⁻¹ day⁻¹ (0-0.3 m) and 1.6 ± 0.2 mg N kg dry soil⁻¹ day⁻¹ (0.3-1.1 m). Rates generally peaked on Days 2 or 3. The availability of labile organic carbon was a major constraint on denitrification in these soils. Acetate addition greatly increased rates, reaching a maximum in ephemeral floodplain soils of 17.4 ± 1.8 mg N kg dry soil⁻¹ day⁻¹ on Day 2: in one deep-soil treatment (low nitrate) this overcame differences in rates observed with depth when acetate was not added, although the rate increase in the other deep-soil treatment (high nitrate) was significantly less (P ≤ 0.01). Without acetate, peak denitrification rates in this experiment were 6.9 ± 0.4 and 2.8 ± 0.2 mg N kg dry soil⁻¹ day⁻¹ in surface and deep soils, respectively. Differences in rates were observed with depth on all occasions, despite similar initial concentrations of dissolved organic carbon (DOC) at both depths. Levels of substrate addition in the second experiment (perennial stream) more closely reflected natural conditions at the site. Mean denitrification rates were consistently much higher in surface soil (P ≤ 0.001), while the source of water used in the slurries (surface water or groundwater from the site) had little effect on rates at any depth. Mean rates when all treatments retained nitrate were: 4.5 ± 0.3 mg N kg dry soil⁻¹ day⁻¹ (0-0.3 m depth); 0.8 ± 0.3 mg N kg dry soil⁻¹ day⁻¹ (0.3-1.0 m); and 0.6 ± 0.1 mg N kg dry soil⁻¹ day⁻¹ (1.8-3.5 m). For comparable treatments and soil depths, denitrification potentials at both sites were similar, apart from higher initial rates in the ephemeral floodplain soils, probably associated with their higher DOC content and possibly also their history of more frequent saturation. The rapid onset of denitrification and the rates measured in these soils suggest there may be considerable potential for nitrate removal from groundwater in these floodplain environments during relatively short periods of saturation.     

Beyond the wetland border: Estimating the impact of roads for two species of water snakes

We used models integrating road maps, traffic volume, and snake movements to examine the potential for roads to contribute to mortality in two species of water snakes that differ in their vagility, use of terrestrial habitats, and conservation status. Road networks and traffic volumes typical of three regions in Indiana, USA, may account for mortality of 14-21% of the population per year in the more vagile, terrestrial, and imperiled copperbelly water snake (Nerodia erythrogaster neglecta) but only 3-5% mortality in the more sedentary, aquatic, and common northern water snake (Nerodia sipedon). The majority (>91%) of road crossings and associated mortality are predicted to occur during overland migrations to other wetlands, suggesting roads bisecting travel routes between wetlands may function as mortality sinks. Our models highlight the proportionately greater risk of mortality for the more vagile and imperiled species, N. e. neglecta, and suggest current wetland conservation strategies that focus on the wetland alone are unlikely to adequately protect wetland biodiversity from certain types of anthropogenic habitat modification. What is needed is a landscape approach to wetland conservation that considers not only the quality of wetlands and nearby terrestrial habitats, but also ensures that terrestrial corridors between wetlands remain permeable and offer safe passage for wildlife.     

Growth,survival, carbon rates for some dry tropical forest trees used in enrichment planting in the Cerro Blanco protected forest on the Ecuadorian coast

Deforestation principally to establish cattle pastures has created large expanses of land dominated by exotic grass prior to the establishment of the Cerro Blanco Protected Forest in Ecuador. A dry forest restoration program was carried out from 2008 to 2017. Tree planting sites were cleared in parallel lines through abandoned pasture and secondary vegetation using manual labor. Native tree species were produced in a nursery on site and used in yearly plantings during the rainy season. A total of 637 hectares were planted at an average stocking density of 1,000 trees per hectare. Growth data was collected from trees planted in nine sites from 2008 to 2017. Mortality rates were determined from a sample of 400 trees of twenty-two species. Survival of all species was greater than 50%. Ten species had survival rates greater than 90%. Vitex gigantea, with high survival rates, also had significantly greater growth rates than the other species (p < 0.0001) and showed the greatest yearly accumulation of total carbon (2.07 Kg C yr ^?1 stem^?1). Other species with high growth rates were Cordia alliodora and Centrolobium ochroxylum. This restoration program demonstrates that the dry forest restoration with timely maintenance and protection from fire and grazing is possible with intensive tree planting of native species.     

Rapid harvest schedules and fruit removal as non-chemical approaches for managing spotted wing Drosophila

Spotted wing Drosophila, Drosophila suzukii (Matsumura) (Diptera: Drosophilidae), has caused significant economic losses to small fruit and berry growers throughout the USA and Europe since its invasion. This pest can lay many eggs over its lifetime within ripening and ripe berries, causing yield loss and the risk of fruit contamination. Zero tolerance for this pest has led to increased use of broad-spectrum insecticides to control it, which are costly and pose many other sustainability and pest management concerns. There is an urgent need to evaluate management strategies that can decrease reliance on chemical controls and mitigate economic losses. Over two growing seasons, we compared harvest schedules for their effect on infestation by D. suzukii, revealing that fruit harvested every 1 or 2 days had significantly fewer D. suzukii larvae than a 3-day harvest schedule. Furthermore, we found that yield per unit effort was highest on a 2-day schedule. Sanitation of the crop is another important component of a successful integrated pest management program, and we found that bagging infested waste berries killed 99% of larvae after 32 h, with higher fruit temperatures in clear bags than white or black bags. In combination, these methods can reduce the effects of this invasive pest on raspberry production. This study will provide guidance to growers on culturally based IPM tactics to decrease reliance on chemical management.