Enhanced fitness conferred by naturally occurring variation in the circadian clock

Natural variation in clock parameters is necessary for the circadian clock to contribute to organismal fitness over a broad geographic range. Considerable variation is evident in the period, phase, and amplitude of 150 Arabidopsis accessions, and the period length is correlated with the day length at the latitude of origin, implying the adaptive significance of correctly regulated circadian timing. Quantitative trait loci analysis of recombinant inbred lines indicates that multiple loci interact to determine period, phase, and amplitude. The loss-of-function analysis of each member of the ARABIDOPSIS PSEUDO-RESPONSE REGULATOR family suggests that they are candidates for clock quantitative trait loci.     

Genetic data confirms field evidence for natural breeding in a wild taro population (Colocasia esculenta) in northern Queensland, Australia

Taro (Colocasia esculenta) is a vegetatively propagated, starchy root crop cultivated in tropical to temperate regions of the world. Wild forms of taro are distributed from India to southern China, Australia and Melanesia. They are widely known wild food or fodder sources, including in Aboriginal Australia, so it is unclear to what extent wild populations have been dispersed by humans, or naturally via insect-borne pollen and seed dispersal by birds or other animals. In Australia, pollinators and seedlings of taro have not been reported, and a key question is whether or not the wild taro there can breed naturally. Here we report field observations of flowering, fruit set, and an insect pollinator (Colocasiomyia, pupal stage), in a historically significant wild taro population at Hopevale in northern Queensland. The observed pupa is congeneric with two pollinating fly species that have a highly specialised, probably coevolutionary, relationship with taro in neighbouring Papua New Guinea. The field observations suggested the possibility of natural breeding at Hopevale. By analyzing microsatellite diversity within the Hopevale taro population, we found high genetic variation overall, indicative of multiple founding individuals. Two sublocations showed low genetic diversity and strongly negative inbreeding coefficients, consistent with predominantly clonal (vegetative) reproduction. A third sublocation showed high genetic diversity and a weakly negative inbreeding coefficient, indicative of sexual reproduction. This difference between sublocations may relate to microenvironmental conditions that favour seedling establishment in some parts of the site. The data constitute the first demonstration that natural breeding and population spread occurs in Australian wild taro.     

Colonization of a marker and field strain of Salmonella enteritidis and a marker strain of Salmonella typhimurium in vancomycin-pretreated and nonpretreated laying hens

This study was conducted to evaluate the influence of a vancomycin pretreatment on the ability of marker (nalidixic-acid resistant) Salmonella Enteritidis (SE(M)), field Salmonella Enteritidis (SE(E)), and marker Salmonella Typhimurium (ST(M)) strains to colonize within the intestinal and reproductive tracts and translocate to other organs of leghorn laying hens. In each of three trials, caged laying hens (76, 26, and 33 wk ofage) were divided into six groups designated to receive SE(M), SE(F), or ST(M), and half were pretreated with vancomycin (n = 11-12 hens). Vancomycin-treated hens received 10 mg vancomycin in saline/kilogram body weight orally for 5 days to inhibit Gram-positive bacteria within the intestines. On Day 6, all hens were concurrently challenged by oral, intravaginal, and intracolonal routes with Salmonella and placed into separate floor chambers by Salmonella strain. Two weeks postinoculation, all hens were euthanatized and the ceca, spleen, liver/gall bladder (LGB), upper (URT), and lower (LRT) reproductive tracts, and ovarian follicles were aseptically collected, and analyzed for Salmonella. Results did not differ for the three hen's ages and were therefore combined. The vancomycin pretreatment also had no significant effect on the colonization ability of SE(M), SE(F) or ST(M), and therefore results were combined within Salmonella strain. The marker strain of Salmonella Enteritidis was recovered from 21% of ceca, 4% of LGB, 9% of LRT, and 17% of the fecal samples. The field strain of Salmonella Enteritidis was recovered from 88% of ceca, 96% of spleen, 92% of LGB, 30% of LRT, 4% of URT, 13% of follicle, and 42% of the fecal samples. The marker strain of Salmonella Typhimurium was recovered from 100% of ceca, 74% of spleen, 91% of LGB, 30% of LRT, 9% of URT, 9% of follicle, and 100% of the fecal samples. Among ceca, spleen, LGB, and fecal samples, SE(F) and ST(M) colonization was significantly greater than SE(M) colonization. Overall prevalence of Salmonella in the reproductive tracts of challenged hens was relatively low, ranging from 4% to 30%.     

Life after the regime: market instability with the fall of the US food regime

The US food regime maintained some degree of stability in terms of prices and production levels for commodities in the world economy. This food regime, resting on supply management policy, began to falter in the early 1970s. In the late-1980s and 1990s, notable changes occurred in the world economy regarding agriculture as the food regime became more market-oriented. The end of the twentieth century saw the breakdown of many institutions, organizations, and international agreements that had tried to stabilize prices and production from 1945 to 1975. This paper examines this period of change (roughly 1960–2010) and explores the effects on five commodities: cocoa, coffee, corn, soybeans, and wheat. These commodities offer important points of comparison. First, while cocoa, coffee, and wheat were regulated by international organizations and agreements, corn and soybeans were not. Second, the US dominated the international corn and soybean markets, but the cocoa, coffee, and wheat markets were much more competitive. And third, corn, soybeans, and wheat were commodities largely produced in the core of the world economy, while cocoa and coffee were produced in the periphery. Thus, comparing the effect of the fall of the US food regime on these commodities reveals the importance of previous regulation, the level of market competition, and geographic origin in the world economy.     

Data-loggers carried on a harness do not adversely affect sheep locomotion

The use of externally fitted motion sensors to animal subjects has the potential for allowing researchers to investigate subtle changes in animal movement that may occur with the onset of specific diseases. However, it is crucial to consider whether or not the use of such technology has an effect on the variables measured. Here, we examine the effect of a body harness data logging device on the locomotive patterns of female Merino sheep, Ovis aries. We extracted locomotion variables typical of motion sensor data (stride frequency, stride length, gait type, speed, and limb velocity) from high-definition video collected under controlled conditions. We found no significant difference between the variables measured in the harnessed and unharnessed conditions. Overall, our experiment demonstrates that data-loggers carried on a harness do not adversely affect sheep locomotion, and extended periods of habituation post-instalment of devices should ensure consistency and accuracy of data in future experiments.     

Endemic sheep scab: risk factors and the behaviour of upland sheep flocks

Since the deregulation of sheep scab in 1992, the number of scab outbreaks per year in the UK has increased rapidly; there has been an estimated 60-fold increase in outbreak incidence between 1992 and 2007. How best to focus management or eradication efforts has therefore been an issue of ongoing debate. Previous work has shown that scab outbreaks occur repeatedly on some farms whereas others never or rarely experience outbreaks. Here, to consider why this pattern occurs, and to quantify the risk of scab associated with different husbandry practices, face-to-face interviews with farmers at 16, randomly selected, repeat-outbreak farms and 16 matched farms with no or little history of scab over the previous 10 years, were used to identify associated risk factors. This showed that farms using common grazing were at significantly higher risk of infestation than farms not using common grazing, as were farms that had direct contact with neighbours' sheep and that had neighbours with scab. To further demonstrate the risk of common grazing, a survey of sheep on one common in south Wales showed that there was significant mixing of sheep from three farms, highlighting the potential for scab transmission between flocks. Common grazing, associated with upland regions, would appear to be the largest single obstacle to effective national scab control in the UK. The results suggest that a cost-effective approach to scab control may be to consider upland and lowland farms as separate epidemiological systems, with upland regions requiring a co-ordinated, systematic approach to achieve any significant management of the problem. In contrast, on lowland farms outbreaks are already largely contained effectively through good biosecurity and treated on a case-by-case basis if they occur.