Stocktake study of current fertilisation recommendations across Europe and discussion towards a more harmonised approach

The European Commission has set targets for a reduction in nutrient losses by at least 50% and a reduction in fertiliser use by at least 20% by 2030 while ensuring no deterioration in soil fertility. Within the mandate of the European Joint Programme EJP Soil ‘Towards climate-smart sustainable management of agricultural soils’, the objective of this study was to assess current fertilisation practices across Europe and discuss the potential for harmonisation of fertilisation methodologies as a strategy to reduce nutrient loss and overall fertiliser use. A stocktake study of current methods of delivering fertilisation advice took place across 23 European countries. The stocktake was in the form of a questionnaire, comprising 46 questions. Information was gathered on a large range of factors, including soil analysis methods, along with soil, crop and climatic factors taken into consideration within fertilisation calculations. The questionnaire was completed by experts, who are involved in compiling fertilisation recommendations within their country. Substantial differences exist in the content, format and delivery of fertilisation guidelines across Europe. The barriers, constraints and potential benefits of a harmonised approach to fertilisation across Europe are discussed. The general consensus from all participating countries was that harmonisation of fertilisation guidelines should be increased, but it was unclear in what format this could be achieved. Shared learning in the delivery and format of fertilisation guidelines and mechanisms to adhere to environmental legislation were viewed as being beneficial. However, it would be very difficult, if not impossible, to harmonise all soil test data and fertilisation methodologies at EU level due to diverse soil types and agro-ecosystem influences. Nevertheless, increased future collaboration, especially between neighbouring countries within the same environmental zone, was seen as potentially very beneficial. This study is unique in providing current detail on fertilisation practices across European countries in a side-by-side comparison. The gathered data can provide a baseline for the development of scientifically based EU policy targets for nutrient loss and soil fertility evaluation.     

Possible role for cryostabilizers in preventing protein and lipid alterations in frozen-stored minced muscle of Atlantic mackerel

Adding DE 18 maltodextrin (80 g kg(-1)) to high-fat minced mackerel was highly effective against lipid oxidation and protein and color changes during frozen storage. It increased the temperature of ice-melting onset (Tm') and decreased freeze concentration of solutes in the unfrozen water (UFW) phase, which would have allowed it to effectively slow such perturbations. This maltodextrin showed a higher effectiveness against lipid oxidation, but was slightly less effective in preventing the loss of protein solubility than common cryoprotectants, that is, an equiproportional mixture of sucrose and sorbitol. Such differences in effectiveness were much higher in low-fat minces, in which lipid oxidation proceeded to a much lower extent. Consequently, prior to replacing traditional cryoprotectants with maltodextrins, it should be known which processes limit the shelf life of the food. Decreasing (from 80 to 50 g kg(-1)) the proportion of maltodextrin added to high-fat minced mackerel showed that although it affected only slightly the effectiveness against lipid oxidation, it did notably affect the effectiveness in preventing the loss of protein solubility and color changes. Therefore, such a decrease could be accepted only if lipid oxidation is the most limiting process of shelf life, but does not seem appropriate when protein changes are important.     

Mycotoxins in pet food: a review on worldwide prevalence and preventative strategies

Mycotoxins contaminate cereal grains worldwide, and their presence in pet food has been a potential health threat to companion animals. Aflatoxins, ochratoxin A, and Fusarium mycotoxins have been found in both raw ingredients and final products of pet food around the globe. Aflatoxin, a hepatotoxin and carcinogen, has caused several food poisoning outbreaks in dogs, and aflatoxin content is regulated in pet food in many countries. Ochratoxin A and Fusarium mycotoxins including trichothecenes, zearalenone, and fumonisins may have chronic effects on the health of companion animals. Grain processing, sampling error, analytical methods, conjugated mycotoxins, storage conditions, and synergistic interactions are common challenges faced by the pet food industry. Food-processing techniques such as sieving, washing, pearling, ozonation, and acid-based mold inhibition reduce the mycotoxin content of cereal grains. Dietary supplementation with large neutral amino acids, antioxidants, and omega-3 polysaturated fatty acids as well as inclusion of mycotoxin-sequestering agents and detoxifying microbes may ameliorate the harmful effects of mycotoxins in contaminated pet food.     

Nod2-dependent regulation of innate and adaptive immunity in the intestinal tract

The gene encoding the Nod2 protein is frequently mutated in Crohn's disease (CD) patients, although the physiological function of Nod2 in the intestine remains elusive. Here we show that protective immunity mediated by Nod2 recognition of bacterial muramyl dipeptide is abolished in Nod2-deficient mice. These animals are susceptible to bacterial infection via the oral route but not through intravenous or peritoneal delivery. Nod2 is required for the expression of a subgroup of intestinal anti-microbial peptides, known as cryptdins. The Nod2 protein is thus a critical regulator of bacterial immunity within the intestine, providing a possible mechanism for Nod2 mutations in CD.     

Prevalence and genotyping of Cryptosporidium in three cattle husbandry systems in Zambia

To determine the prevalence of Giardia genotypes in 12–24 month old dairy heifers, fecal specimens were collected from two farms each in Vermont, New York, Pennsylvania, Maryland, Virginia, North Carolina, and Florida. Specimens, cleaned of fecal debris and concentrated using CsCl density gradient centrifugation, were subjected to PCR and DNA sequence analysis. Prevalence of Giardia infection, ranged from 11% to 75% on 14 farms with an average prevalence of 36% (204 positive cattle out of 571 examined). DNA sequence analysis of the 16S rRNA gene revealed 91% of the 204 Giardia isolates were Assemblage E, and 9% were Assemblage A. The prevalence of these genotypes varied greatly from farm to farm, with four farms having exclusively Assemblage E Giardia. Overall, Assemblage E was present in 33% of all animals tested and Assemblage A was present in 3% of the animals. Thus, while many of the heifers were infected with a genotype that is not known to be infectious for humans, 1–2 year old heifers on 10 of 14 farms did harbor zoonotic Assemblage A Giardia. Therefore, heifers cannot be overlooked as a potential source of human infectious cysts in the environment, with some farms representing a much higher risk than others.     

Falling through the cracks: the fading history of a large iconic predator

Human impact on the oceans predates scientific observation, which for many animal populations has captured only recent changes. Such a limited knowledge can hamper finding optimal management and conservation strategies including setting appropriate recovery targets. Sawfishes are among the most endangered marine vertebrates in the ocean. Historical human impacts have resulted in sawfish extinction in many coastal areas around the world; however, in the Mediterranean Sea, their past presence and possible extinction have been debated for decades. Recently, it was concluded that the region never hosted resident populations because of unsuitable environmental conditions. Through an extensive bibliographic and archival search and an extinction analysis, we reconstructed the history of sawfishes in the Mediterranean Sea. Between 1576 and 1959, there were 48 independent accounts of the occurrence of two sawfish species (Pristis pristis, Pristidae and Pristis pectinata, Pristidae), including 24 documented catches. Sawfishes were mainly recorded in the western Mediterranean, in areas close to large rivers with light human impact. Most of the documented individuals were juveniles, suggesting local parturition. Extinction analyses yielded variable results and were affected by the sparseness of records but suggested that both species went extinct in the Mediterranean Sea in the 1960s–1970s. Our results challenge current assumptions on sawfish ecology and biogeography, offer new options for sawfish conservation in the Atlantic and highlight the importance of historical analyses for reconstructing ecosystem baselines and setting recovery targets.     

Standard precipitation index to track drought and assess impact of rainfall on watertables in irrigation areas

The Standard Precipitation Index (SPI) is employed to track drought and assess the impact of rainfall on shallow groundwater levels in three selected irrigation areas of the Murray-Darling Basin in Australia. The continuous SPI method can provide better means of quantifying rainfall variability and correlating it with changes of shallow watertable levels since it is based on continuous statistical functions comparing rainfall variability over the entire rainfall record. Drought analysis in the Australian irrigation areas using SPI indicates that the recent 2000–2006 drought is not the worst drought that has occurred in the recorded history, however if the current low rainfall pattern continues, it would be one of the most prolonged drought. The shallow groundwater fluctuations in the Murrumbidgee Irrigation Area show a very strong correlation with winter rainfall variation. The shallow piezometric levels in the Coleambally Irrigation Area show a weaker degree of correlation with the SPI due to local and regional groundwater dynamics and changes in rice water use. The groundwater levels in the Murray Irrigation Area show least correlation with the SPI, which may be attributed to improved irrigation management practices and complex nature of the groundwater recharge and discharge processes in this area. The overall results however show that the SPI correlates well with fluctuations in shallow ground water table in irrigation areas, and can also capture major drought patterns in Australia. The correlation of SPI with groundwater levels can be adopted for environmental reporting and used as a method of relating climatic impacts on watertables. Differences in piezometric response between years with similar winter and yearly SPI values can be attributed to improvement in irrigators’ management practices.     

White Spot Syndrome Virus in cultured shrimp: A review

Shrimp is one of the main aquaculture species in the world. Different viruses affect them, which causes serious mortality to economically important species, such as Penaeus monodon, Litopenaeus vannamei and L. stylirostris, among others. White spot syndrome virus or WSSV is a highly lethal, stress‐dependent virus, which belongs to the family Nimaviridae, genus Whispovirus. Three WSSV virus isolates were first detected in 1992 in Thailand, Taiwan and China. Later, a fourth isolate of the virus was detected in the Americas in 1999. This virus has a large circular double‐stranded DNA genome with different sizes (292.9–307.2 kb), where the diverse isolates show differences in virulence. This virus infects a wide range of aquatic crustaceans by vertical and horizontal transmission, with different mortality results. The spread of infection between regions may be due to infected shrimp and carriers such as other crustaceans, seabirds, aquatic arthropods or other vectors. The aim of this work is to describe the current knowledge on the status, transmission, pathology, isolation, control and genomic characteristics of WSSV.     

Growth performance,feed utilization and body composition of Dentex dentex fed on different macronutrient combinations

Determining an adequate macronutrient balance is essential to guarantee the production success. As protein is the limiting component for fish food, the utilization of lipids or carbohydrates as partial substitutes of this nutrient is a challenge to improve its use. In order to get an approximation of the maximum levels of utilization for carbohydrates and/or lipids and determine the most adequate macronutrient to partly replace protein as the main energy source of diets for dentex (91.7 ± 1.4 g mean weight), four experimental diets with different protein:lipid:carbohydrate percentages (43/16/28, 43/24/4, 38/19/28 and 38/24/13) were tested for 13 weeks. The results indicated the possibility of using 38% of dietary protein without affecting growth performance, under the experimental conditions. There were no differences among the four diets either in most of the nutritive utilization indicators or in the body composition and haematological parameters. The influence of dietary composition was only observed in the feed intake, being higher with more dietary carbohydrates, and the hepatosomatic index and protein efficiency ratio, showing more elevated values in diets with a higher lipid level. The dentex capacity of using both carbohydrates and lipids efficiently to obtain the necessary energy for its correct growth, as well as to compensate the energetic ‘vacuum’ caused by the dietary protein reduction, under the assayed conditions, was confirmed.