A correlation network approach to metabolic data analysis for tomato fruits

Network analysis of correlations between abundances of metabolites across tomato genotypes can help in unraveling the biological basis of organoleptic variation in tomato. We illustrate how to construct and interpret simple correlations networks using metabolic data collected on a diverse set of tomato genotypes. Various types of correlations are calculated and displayed in the form of networks. Interpretations on the basis of network analyses are compared to interpretations following principal components analysis.     

Sectional notes

American Journal of Potato Research -     

The southern corn leaf blight epidemic

A dramatic shift in the genetics of host-parasite interaction and balance occurred in the U.S. corn crop in the 1970 growing season. Southern corn leaf blight incited by Helminthosporium maydis Nisikado & Miyake evolved from a minor disease that causes an average annual loss of less than 1 percent, to one that caused more than the 12 percent average expected from all diseases of corn in the United States. In 1970 the losses to corn leaf blight approaches 710 million bushels. Reserves of corn and other grains ease the impact on the economy and food supplies but there are important domestic and foreign effects of the loss. The epidemic illustrates the vulnerability of our food crops to pests. Sources of genetic resistance to the new race of Helminthosporium maydis are available. The seed industry estimates that for 1971 enough resistant and partially resistant seed to plant about one-half of the crop may be available. Adequate supplies are expected in 1972. Sustained research programs are essential in protecting our food supplies from potential losses of catastrophe magnitude. Several professional groups, including the American Phytopathological Society and the Entomological Society of America, have urged that a program and facilities be established for the study of exotic pests that threaten our agriculture so that controls may be found before the pests are here. Such a program would be desirable but covers only one aspect of the problem. What is really needed is an overall strengthening of research on crop pests.     

THE EFFECTS OF ROTATION ON THE RADIOGRAPHIC APPEARANCE OF THE CANINE CARDIAC SILHOUETTE IN DORSAL RECUMBENCY

Cardiac mensuration was done on thoracic radiographs of Beagles to determine the effects of rotation on the cardiac silhouette in dorsal recumbency. As the thorax became more rotated, surfaces of the heart not normally seen were projected, making interpretation of cardiac changes unreliable. A positioning standard based on the relationship of the dorsal spinous processes to the vertebral body was developed. If the tips of the dorsal spinous processes were within the bounds of the vertebral bodies, the radiographs were suitable for cardiac interpretation. If the tips of the dorsal spinous processes were outside the bounds of the vertebral bodies, there was enough rotation to make interpretation unreliable. A microcomputer, digitizer pad, and a BASIC language program were used to input, store, and calculate the various cardiac mensuration parameters.     

Die Entwicklung des Dottersackes beim Wiederkäuer (Schaf und Rind)

Yolk sac development was investigated in 69 ovine and 10 bovine embryos from the blastocyst stage to the 7th week of gestation. Light and electron microscopical findings are reported. The yolk sac in sheep and cattle is composed of an enlarged sac-like portion lying below the embryo and two ends which follow the elongated course of the trophoblast. In sheep, an open connection exists between the intestines and the yolk sac up to a crown-rump length (CRL) of 9 mm. It is closed by 12 mm CRL. The wall of the yolk sac is especially well vascularized in the enlarged, sac-like portion. Primary erythropoiesis occurs within the blood capillaries. In the blastocyst, the yolk sac entoderm is made up of elongated, flat cells. It becomes cuboidal in the 3 mm embryo (ovine) and later columnar. The up to 20 microns tall cells stain darkly and contain numerous light-colored vesicles. At 4.5 mm CRL light cells appear between the dark ones. Both cells are rich in rough endoplasmic reticulum (rER). The increased staining of the darker cells is due to an osmophilic cytoplasm and numerous, often parallel lamella of rER. The rER of the light cells is enlarged to irregularly-shaped cisternae, which nearly fill the entire cytoplasm and give them a rounded appearance. The dark cells contain polygonal nuclei, whereas those in the light cells are round with one or two nucleoli. The oval mitochondria have only a few peripheral cristae. Golgi fields are not very common. Cells of the entoderm are connected to one another over zonulae occludentes. They possess microvilli on the luminal surface and are supported by a basement membrane. From 5 mm CRL onwards (ovine), the yolk sac entoderm folds itself between the capillaries, thereby becoming stratified. The intercellular space between the cells expands as projections between neighboring cells interlock. Canaliculi arise between adjacent epithelia. The wall of the yolk sac thickens as a result of this infolding and the densely packed capillaries. Infoldings are especially predominant in the sac-like portion of the yolk sac, and only suggested in the ends. Involution of the yolk sac begins in the peripheral end segments and proceeds centripetally. Numerous glycogen particles appear in the yolk sac entoderm cells of the ovine fetus at a CRL of 36 mm, and by a CRL of 42 mm, the sac-like portion has also begun to show signs of degeneration. Mesenchyme is very sparse within the wall of the yolk sac throughout the entire period of development.(ABSTRACT TRUNCATED AT 400 WORDS)     

Red Oak Borer, Enaphalodes rufulus (Coleoptera: Cerambycidae), in the Ozark Mountains of Arkansas, U.S.A.: An Unexpected and Remarkable Forest Disturbance

A complex interaction of multiple factors has resulted in an oak decline event in oak-hickory forests of the Ozark Mountains of Arkansas and Missouri, U.S.A. The most striking feature of this situation is an unprecedented population explosion of red oak borer, a species of cerambycid beetle, Enaphalodes rufulus (Haldeman), which appears to be causing extensive mortality to mature red oaks (Quercus, subgenus Erythrobalanus). The insect is a native species, historically a minor pest of oaks, found throughout the eastern United States. Beetles normally reproduce in living oaks, as larvae initially feed in phloem tissue and subsequently bore into xylem where pupation occurs. The life cycle is two years in length and synchronous adult emergence occurs in odd-numbered years. Data from previous research indicate average attack densities of less than four per tree with a high of 71 on a single tree. Historical emergence densities are similarly low and the highest reported was 15 adults from one tree. Our research is concerned with understanding factors contributing to this outbreak; developing sampling methods for red oak borer; assessing oak mortality; and evaluating site and stand conditions associated with the current outbreak. Results of our initial sampling reveal dramatically higher average attack densities of 244 per m2 and emergence densities of 18 per m2 of bark surface area. We confirm a three-week period of adult emergence and activity during mid-June to early July. We also report on possible management responses by federal and state agencies to this remarkable epidemic and oak mortality crisis.     

Fate of the benzoylphenyl urea CGA-184699 in the cat flea Ctenocephalides felis

HPLC was used to determine levels of the benzoylphenyl urea, CGA-184699, in cat blood, flea faeces and eggs. Rate constants were determined for the decline of CGA-184699 concentration in flea faeces of fleas that fed on both high (696 ng ml^?1) and low (305 ng ml^?1) host blood concentrations. There were strong correlations between the concentration of the drug in the host's blood and in flea eggs, between egg concentration and egg hatch and between the concentration of CGA-184699 in faeces and mortality to larvae feeding upon faeces.