Geosmin causes off‐flavour in arctic charr in recirculating aquaculture systems

The ‘earthy’ and ‘muddy’ off‐flavours in pond‐reared fish are due to the presence of geosmin or 2‐methylisoborneol in the flesh of the fish. Similar off‐flavours have been reported in fish raised in recirculating aquaculture systems (RAS); however, little information is available regarding the cause of these off‐flavours. Our hypothesis was that earthy and muddy off‐flavour compounds, found previously in pond‐raised fish, are also responsible for off‐flavours in fish raised in RAS. In this preliminary study, we examined water, biofilms in RAS and fillets from cultured arctic charr known to have off‐flavours and requiring depuration using instrumental [solid‐phase microextraction procedure and gas chromatograph‐mass spectrometry (GC‐MS)] and human sensory analyses. Geosmin was present in the samples taken from the biofilter and on the side walls of the tanks. Two‐methylisoborneol was only found in low levels in the samples. The GC‐MS results indicated the presence of geosmin in the fillets (705 ng kg^?1), but lower levels were found in the water (30.5 ng L^?1). Sensory analyses also detected an earthy flavour (i.e., geosmin presence) in the fillets, and, therefore, it appears that geosmin is the main compound responsible for the off‐flavour in RAS. Further studies are being performed to identify the microorganisms responsible for geosmin production in RAS.     

Haematologic and immunologic parameters of bullfrogs,Lithobates catesbeianus,fed probiotics

The effects of two probiotics (P₁–Lactobacillus acidophilus, Bifidobacterium bifidum and Enterococcus faecium and P₂–Bacillus subtilis) supplemented to commercial feed (40% crude protein) on the haematological and immunological parameters of the bullfrog Lithobates catesbeianus were studied. Two doses of each probiotic (5 and 10 g kg^?1 of food) were added to the diets and fed to frogs, totalling five treatments over 112 days. Haematological analyses consisted of total and differential leucocyte counts, erythrocyte and thrombocyte counts, haematocrit, haemoglobin levels and RBC indices (mean corpuscular volume, mean corpuscular haemoglobin – and mean corpuscular haemoglobin concentration) and the immunological parameters included phagocytic capacity and phagocytic index of peritoneal phagocytes. The results showed that the probiotics did not significantly influence any of the haematological parameters measured. However, immunological assays showed that the probiotics had an immunostimulating effect. The greatest effects were seen with probiotic P₁ fed at a dose of 10 g kg^?1 of diet and probiotic P₂ fed at 5 g kg^?1 of diet.     

Low-Molecular-Weight Fucoidan Induces Endothelial Cell Migration via the PI3K/AKT Pathway and Modulates the Transcription of Genes Involved in Angiogenesis

Low-molecular-weight fucoidan (LMWF) is a sulfated polysaccharide extracted from brown seaweed that presents antithrombotic and pro-angiogenic properties. However, its mechanism of action is not well-characterized. Here, we studied the effects of LMWF on cell signaling and whole genome expression in human umbilical vein endothelial cells and endothelial colony forming cells. We observed that LMWF and vascular endothelial growth factor had synergistic effects on cell signaling, and more interestingly that LMWF by itself, in the absence of other growth factors, was able to trigger the activation of the PI3K/AKT pathway, which plays a crucial role in angiogenesis and vasculogenesis. We also observed that the effects of LMWF on cell migration were PI3K/AKT-dependent and that LMWF modulated the expression of genes involved at different levels of the neovessel formation process, such as cell migration and cytoskeleton organization, cell mobilization and homing. This provides a better understanding of LMWF’s mechanism of action and confirms that it could be an interesting therapeutic approach for vascular repair.     

Development and characterization of a new set of 164 polymorphic EST‐SSR markers for diversity and breeding studies in rubber tree (Hevea brasiliensis Müll. Arg.)

Despite its economic importance and recent genome release, the need for molecular tools for Hevea brasiliensis is high. In the frame of a disease resistance study, EST sequences were retrieved from public database or generated by sequencing SSH libraries. Sequences were trimmed and microsatellite motifs searched using an ad hoc bioinformatic pipeline, and pairs of primers for the amplification of candidate markers were generated. We found a total of 10 499 unigenes from both sources of sequences, and 673 microsatellites motifs were detected using the default parameters of the pipeline. Two hundred sixty‐four primer pairs were tested and 226 (85.6%) successfully amplified. Out of the amplified candidate markers, 164 exhibited polymorphism. Relationships based on dendrograms using simple matching index and diversity statistics based on EST‐SSRs were compared with Genomic SSRs, showing the potentialities of EST‐derived microsatellites for resistance studies but also for population genetics approaches.     

Modelling interannual and spatial variability of leaf senescence for three deciduous tree species in France

The annual timing of temperate forest leaf colouring is affected by climate change; to date, its modelling remains a challenge. We take advantage of a ca. 400 leaf colouring observations database acquired in France during the period of 1997–2006 in order to develop a new modelling framework aimed at predicting the spatial and year-to-year variability of leaf colouring in European beech and oak (Fagus sylvatica L., Quercus petraea (Matt.) Liebl. and Quercus robur L.). We postulate colouring to be the outcome of a one-way process triggered by photoperiod and progressing through a photoperiod-sensitive cold-degree day summation procedure. Observations were pooled according to genus for the fitting and ensuing validation procedures. Parameters of the model suggest that colouring processes start earlier, and are sensitive to higher temperatures for Quercus than for Fagus. Errors associated with the modelled predictions are up to 13.0 days in Fagus and 10.3 days in Quercus, which are significantly lower than errors associated with (1) the overall mean (null model) or (2) previously published modelling frameworks. When averaged on a site basis, model predictions reproduced spatial variability of leaf colouring over the French territory with good efficiency (modelling efficiencies: 0.44 for Fagus, 0.45 for Quercus). The interannual variability of leaf colouring over France was fairly reproduced (r² = 0.74 for Fagus, 0.83 for Quercus). On that basis, we claim that the modelling framework developed herein can be efficiently integrated into more general schemes aimed at simulating matter and energy fluxes on a regional scale, and we provide a generic parameterisation of the model to be integrated into such schemes. When used in a prospective analysis, the model predicts a trend towards delay in leaf colouring of 1.4 and 1.7 days per decade in Fagus and Quercus, respectively, over the period of 1951–2099 in France.     

Chlamydial infections in duck farms associated with human cases of psittacosis in France

Five severe cases of psittacosis in individuals associated with duck farms were notified in France between January and March 2006. Diagnostic examination included serology and/or molecular detection by PCR from respiratory samples. As a consequence, we investigated all duck flocks (n=11) that were housed in the three farms where human infections occurred. While serology by complement fixation test was negative for all samples, cloacal and/or tracheal chlamydial excretion was detected by PCR in all three units. Notably, one duck flock was tested strongly positive in 2 of the 3 affected farms, and Chlamydophila (C.) psittaci strains were isolated from cloacal and/or tracheal swab samples from both farms. Human samples and duck isolates exhibited the same PCR-RFLP restriction pattern, which appeared to be an intermediate between genotypes A and B. Analysis of ompA gene sequences and comparison to those of the type strains showed that the isolates could not be strictly assigned to any of the generally accepted genotypes of C. psittaci. Further analysis by MLVA of the PCR-positive human samples revealed two distinct patterns, which were related to previously isolated C. psittaci duck strains.     

Novel technique for definite blastomere inhibition and distribution of maternal RNA in sterlet Acipenser ruthenus embryo

Fisheries Science - The cleavage pattern of a vertebrate’s embryo is either holoblastic (complete) or meroblastic (partial). Sturgeon and other basal bony fishes represent a transition of the...     

Deformation induced by ethanol substitution in normal and tension wood of chestnut (Castanea sativa Mill.) and simarouba (Simarouba amara Aubl.)

Wood deformation in the longitudinal and tangential directions induced by ethanol substitution and oven-drying was measured in normal wood (NW) and tension wood (TW) of chestnut (Castanea sativa Mill.) (TW with G-fibres) and simarouba (Simarouba amara Aubl.) (TW without G-fibres). The results show that with increased concentration of ethanol solution TW tends to contract, regardless of the presence or absence of G-fibres. In contrast, both NW and opposite wood expand at different rates in the longitudinal direction. These results are discussed and explained by the role of stress state at cell wall level.