Clavibacter michiganensis subsp. michiganesis: Tracking strains using their genetic differentiations by ISSR markers in Southern Turkey

There is no available data published related to the dissemination of bacterial canker caused by Clavibacter michiganensis subsp. michiganensis (Cmm) and its genetic diversity in Turkey. It is important to control new introduced inoculum sources by commercial seeds and seedlings. Pathogens were identified by morphological features and the identity was confirmed by PCR amplification using a specific primer PSA-4, PSA-R in addition to microbiological tests. ISSR markers showing high polymorphism ratios were selected and used to characterize Cmm strains. The collected strains were classified into different groups on the basis of ISSR-PCR fingerprints, which showed remarkable genetic specificity and diversity not previously identified in Cmm, suggesting that genetic differences are related to dissemination of the pathogen in the region. This is the first ever study carried out on the characterization of Cmm using ISSR. The selected ISSR primers to characterize Cmm can be used to determine genetic differences in further studies.     

Measurement and prediction of nitrogen loss by simulated erosion events on cultivated forest soils of contrasting structure

The objectives of this study were to determine nitrogen (N) loss associated with erosion of forest soils and to explore the role of soil structure and other factors governing N enrichment of sediment to aid prediction of N loss. We measured erosion, size distribution of aggregates in the sediment and N distribution in various aggregate fractions using simulated rainfall on samples of three cultivated forest soils of contrasting structure (repacked in trays) exposed to four erosion conditions. Both sediment loss and N loss increased with slope and kinetic energy of rainfall suggesting greater dependency of N loss on sediment loss than on N concentration in the sediment. Irrespective of erosion treatments and soil type, the bulk sediment and its size fractions were mostly richer in N than those of the uneroded soils. The enrichment ratio (E_R) and concentration ratio (C_R) of N for sediment cast some doubt on the application of raindrop stripping as a mechanism of N enrichment of sediment for soils of widely differing characteristics. Previously published models of N enrichment of sediment did not predict E_R for our soils satisfactorily. However, an empirical model using published data on erosion and N loss agreed well with the results. This predictive method only requires information on sediment loss that can be easily obtained from an erosion model.     

On the chemical composition and nutritional value of pleurotus taxa growing on umbelliferous plants (apiaceae)

Unpublished data on the chemical composition and nutritional value of Pleurotus mushrooms, growing on Umbelliferous plants (Apiaceae), are here reported. Cultivated basidiomata of four different Pleurotus taxa were analyzed in order to evaluate the composition in lipids, sugars, nitrogen, water, vitamins, ashes, and energetic values. The results showed that Pleurotus mushrooms are suitable in every type of diet thanks to their low caloric content, gastronomic value, vitamins, and mineral salt contents. The presence of a high content of vitamin B(12) and riboflavin in Pleurotus nebrodensis is noteworthy.     

Genetic Relationships and Variation among Biotypes of Dallisgrass (Paspalum dilatatum Poir.) and Related Species Using Random Amplified Polymorphic DNA Markers

The genus Paspalum L. consists of more than 400 species. Around twenty-five informal groups of species are recognized in Paspalum and the Dilatata group is of special interest because its members are excellent potential forage grasses. Seventy-five germplasm accessions, representing 15 taxa, were analyzed using randomly amplified polymorphic DNA (RAPD). Polymorphisms were observed with twenty-two primers in the Dilatata group and 16 of those were analyzed. Four hundred and four different RAPD fragments were generated, resulting in an average of 25.2 bands per primer. Among the 404 markers analyzed, 48 (11.88%) were exclusive for the P. dilatatum Poir. biotypes, 31 (7.67%) were exclusive to taxa belonging to other groups included in this study, 28 markers (6.93%) were diagnosed for other species of the Dilatata group and 16 (3.96%), for natural hybrids. Extensive RAPD variation was found among the species studied. Inter- and intra-taxonomic polymorphisms were detected. A dendrogram based on the RAPD data shows some clusters corresponding to the same taxa. However, the biotypes of P. dilatatum do not form a cluster. The present work confirms that the RAPD technique can be used to determine genetic relationships between the taxa belonging to the Dilatata group.     

Effect of the number of intercrosses on grain yield in basic rice synthetic populations

The effect of 0, 1, 2, 3 and 4 intercross cycles using genetic male sterility on the mean yield and genetic variability of the CNA 5 irrigated rice synthetic population was assessed studying 300 S_0:2 (1998/99) and S_0:3 (1999/00) families grown in two locations (Lambari, MG and Goianira, GO). Each intercross was investigated using a 8 × 8 triple lattice design experiment containing 60 families and four control cultivars. Five experiments were carried out per location and generation, totaling 20 experiments. Individual, combined over locations, combined over generations and combined over locations and generations analyses of variance were performed. Linear regression equations were fitted to data of each location and generation as well as, genetic and phenotypic parameters were estimated. An average increase of 3.91% in grain yield was obtained with the increase in the number of intercrosses. However, when genetic gains obtained from selection of the five and ten highest yielding families were considered, negative b estimates were always obtained, suggesting a tendency of gain increase reduction with the increase in the number of intercrosses. This was confirmed by the analysis of the means of the best families, since increases in the number of intercrosses did not result in selection of families with greater mean grain yield. The estimates of the genetic variances and heritabilities did not suggest an increase in genetic variability with the increase in intercross cycles. Therefore, carrying out intercrosses on the base population did not improve the results of the irrigated rice recurrent selection program. This revised version was published online in August 2006 with corrections to the Cover Date.     

A bio-economic modelling project for small-scale milk production systems in South-East Brasil

This paper reports on the development and use of a bioeconomic model to simulate dairy enterprises in the Zona da Mata of Minas Gerais State in south-east Brasil.In view of the relatively small size of the units, each animal within the herd is accounted for on an individual basis and the main biological events and processes are treated stochastically. Within the limits of given herdranges for genetic potentials, actual rates of performance are estimated from the levels of feeding and other management factors. An energy balance approach is used to assess the contributions of pasture, cut forage and concentrates in the diet.The model has been used to help in identifying priority areas for applied research, to explore various combinations of herd potential and level of feeding, the behaviour of different herd sizes and the potential returns from specific technical innovations.     

South African field strains of Haemonchus contortus resistant to the levamisole/morantel group of anthelmintics

A strain of Haemonchus contortus from the Pietermaritzburg district of Natal was found to be resistant to levamisole (geometric mean efficacy 76.5%), morantel (41.9%), the benzimidazoles (oxfendazole: 33.7%) and rafoxanide (82.0%), but apparently fully susceptible to closantel and disophenol. In the case of ivermectin, a mean of 5.2% of the H. contortus was not removed at a dosage of 200 micrograms kg-1 live mass. A second strain of H. contortus, from Amsterdam in the south-eastern Transvaal, showed reduced susceptibility to levamisole (80.8%) and morantel (46.2%), the only 2 drugs tested. This is apparently the first report of resistance to the levamisole/morantel group of anthelmintics in sheep in South Africa.     

A retrospective study of hepatic abscesses in goats: pathological and microbiological findings

Post-mortem examination of 658 goats showed that 17 (2.5%) exhibited hepatic abscesses. The following bacteria were isolated: Corynebacterium pseudotuberculosis (58.9%), Escherichia coli (11.8%), Corynebacterium sp. (11.8%), Pasteurella haemolytica (5.9%), Proteus sp. (5.9%) and Staphylococcus aureus (5.9%). Hepatic abscesses occurred more frequently in adult animals. Eleven of the 17 goats (64.7%) were older than 12 months of age. Four goats (23.5%) were 12 months of age and only two (11.8%) were less than 1 year of age. All of the goats with hepatic abscesses were in poor nutritional condition and the abscesses were invariably associated with accompanying pathological disorders at other body sites.     

Seroepidemiology of Toxoplasma gondii and Neospora caninum in dogs from the state of Paraíba, Northeast region of Brazil

A cross-sectional study was conducted to determine the seroprevalence of anti-Toxoplasma gondii and anti-Neospora caninum antibodies and to investigate the risk factors related to antibodies against T. gondii and N. caninum in dogs of the city of Campina Grande, state of Paraiba, Northeast region of Brazil. For this purpose, 286 blood samples were collected from dogs during the rabies vaccination campaign, in September 2003, and on this occasion questionnaires addressing epidemiological aspects of the infections were given to each dog owner. The sera were analyzed for anti-T. gondii and anti-N. caninum antibodies by indirect fluorescent antibody tests. Of the total of 286 dogs, 129 were positive for T. gondii (titer16) with a prevalence value of 45.1% (95% CI=39.24-51.07%). For N. caninum, 24 dogs were positive (titer50), with a prevalence value of 8.4% (95% CI=5.45-12.23%). Antibodies to T. gondii and N. caninum were found simultaneously in 14 dogs (4.9%; 95% CI=2.7-8.08%). For T. gondii infection, the risk factors associated with seroprevalence was the age of the animals, with dogs older than one year presenting higher values of odds ratio, and co-habitation of cats in the household. For N. caninum infection, dogs that have street contact had higher odds of seropositivity than dogs that remained exclusively in a domestic environment.