Assessing the effects of the clumping phenomenon on BRDF of a maize crop based on 3D numerical scenes using DART model

Inverting radiative transfer (R-T) models against remote sensing observations to retrieve key biogeophysical parameters such as leaf area index (LAI) is a common approach. Even if new inversion techniques allow the use of three-dimensional (3D) models for that purpose, one-dimensional (1D) models are still widely used because of their ease of implementation and computational efficiency. Nevertheless, they assume a random distribution of foliage elements whereas most canopies show a clumped organization. Due to that crude simplification in the representation of the canopy structure, sizeable discrepancies can occur between 1D simulations and real canopy reflectance, which may further lead to false LAI values. The present investigation aims to appraise to which extent the incorporation of a clumping index (noted λ) into 1D R-T model could improve the simulations of Bidirectional Reflectance Distribution Function (BRDF). Canopy BRDF is simulated here for three growth stages of a maize crop with the Discrete Anisotropic Radiative Transfer (DART) model in the visible and near infrared spectral bands, for two contrasted soil types (dark and bright) and different levels of heterogeneity to represent the canopy structure. 3D numerical scenes are based on in-situ structural measurements and associated BRDF simulations are thus considered as references. 1D scenarios assume either that leaves are randomly distributed (λ = 1) or clumped (λ < 1). If BRDF simulations seem globally reliable under the assumption of a random distribution in near infrared, it can also lead to relative errors on the total BRDF up to 30% in the red spectral band. It comes out that the use of a clumping index in a 1D reflectance model generally improves BRDF simulations in the red considering a bright soil, which seems relatively independent of LAI. In the near infrared, best results are usually obtained with homogeneous canopies, except with the dark soil. Clearly, influent factors are mainly the LAI and the spectral contrast between soil and leaves.     

Combining ability of yield and yield components among Fusarium oxysporum f.sp. strigae-compatible and Striga-resistant sorghum genotypes

ABSTRACT

Use of sorghum [Sorghum bicolor (L.) Moench] cultivars with partial resistance to Striga spp. and Fusarium oxysporum f.sp. strigae (FOS) represents a novel strategy to control Striga. This study aimed to identify the nature of gene action controlling grain yield and yield components and to select promising sorghum crosses possessing both FOS compatibility and Striga resistance, along with good combining ability effects. One-hundred hybrids, developed from pairwise matings among 10 FOS compatible, high-yielding female lines and 10 Striga-resistant male lines, were evaluated with and without FOS inoculation. The F₁s were field evaluated at three locations in Tanzania known for their severe Striga infestation, using an alpha lattice design with two replications. General (GCA) and specific combining ability (SCA) variances were significant for grain yield per plant, hundred-seed weight, plant height, flowering time and the number of Striga plants. The study demonstrated FOS inoculation to be an effective means of controlling Striga. Families 675?×?672, AS435?×?3993 and 4643?×?AS436 displaying large SCA effects for grain yield, and 4567?×?AS429, 3424?×?AS430 and 3424?×?AS436 with small SCA effects for Striga counts should be useful genetic resources for breeding and integrated Striga management.     

A method for intervertebral space distraction before stabilization combined with complete ventral slot for treatment of disc-associated wobbler syndrome in dogs

Objective— To evaluate the use of a modified K-wire spacer for maintaining intervertebral distraction after ventral decompression and during stabilization as a treatment for disc-associated wobbler syndrome in large breed dogs.
Study Design— A retrospective study.
Animals— Dogs (n=7) with disc-associated wobbler syndrome.
Methods— Medical records (2003–2006) of dogs treated by a modified surgical method were evaluated. Data retrieved were signalment, onset and duration of clinical signs, neurologic abnormalities, diagnostic methods, surgical procedure, immediate, and long-term (≥1 year) postoperative clinical and radiographic outcome.
Results— Mean duration of clinical signs was 4.8 months. Neurologic signs included ataxia (2), ambulatory tetraparesis (2), and non-ambulatory tetraparesis (3). Three dogs had disc protrusion in 2 sites, 2 dogs had the procedure in 1 location and stabilization of both affected sites. All dogs improved dramatically and remained for 1–3 years. One dog had recurrence of cervical discomfort 13 months later.
Conclusions— Despite the limited number of dogs, overall initial successful outcome with only 1 dog having mild recurrence 13 months later supports further use and evaluation of this technique.
Clinical Relevance— Distraction using a K-wire spacer after ventral decompression followed by stabilization should be considered in dogs with disc-associated wobbler syndrome to prevent collapse of the intervertebral space.     

Assessment of stakeholder perceptions of the damage to silo bags by vertebrate species in Argentina

We conducted an on-line questionnaire to assess stakeholder perceptions about damage to silo bags by vertebrate species in Argentina. We received 190 responses reporting damage to silo bags by vertebrates from the Pampas, Espinal, and Chaco regions. More than two-thirds of respondents indicated armadillos were the main harmful species, followed by rodents and dogs. Frequency of damage to silo bags was higher for armadillos (79%) than for the other species together (64%), and was higher in the Pampas (79%) than in the other regions (45–66%), suggesting a latitudinal gradient of damage. Economic losses were reported as “medium” or “high” by 37% of respondents. According to these stakeholders, damage to silo bags by vertebrates is a regionally extended phenomenon in most of the Argentine agricultural region and it is recognized as economically relevant by these stakeholders. Management of this conflict should focus on environmental aspects.     

Bayes and diagnostic testing

Interpretation of the result of a diagnostic test depends not only on the actual test result(s) but also on information external to this result, namely the test's sensitivity and specificity. This external information (also called prior information) must be combined with the data to yield the so-called updated, posterior estimates of the true prevalence and the test characteristics. The Bayesian approach offers a natural, intuitive framework in which to carry out this estimation process. The influence of the prior information on the final result may not be ignored. Guidance for the choice of prior information not in conflict with the data can be obtained from a set of statistics and indices (DIC, p(D), Bayes-p).     

Tithonia and senna green manures and inorganic fertilizers as phosphorus sources for maize in Western Kenya

Efforts to overcome declining soil fertility on small holder farms in western Kenya must be consistent with the reality of low utilization of inorganic fertilizers. Likewise organic inputs alone cannot supply adequate nutrients. The use of two organic resources, Tithonia diversifolia (tithonia) and Senna spectabilis (senna) leaves, and their combination with inorganic P for improving soil fertility and maize yields was investigated on a P limiting soil in Western Kenya. Treatments included: 1) control, no inputs; 2) 5 t ha⁻¹ (dry matter) tithonia leaves; 3) 5 t ha⁻¹ senna leaves; 4) 5 t ha⁻¹ tithonia leaves + 25 kg P ha⁻¹ as triple superphosphate (TSP); 5) 5 t ha⁻¹ senna leaves + 25 kg P ha⁻¹ (as TSP); and 6) 25 kg P ha⁻¹ of TSP. Maize was used as a test crop. Decomposition and P and N release of tithonia and senna leaves were determined in a litterbag study. Tithonia + TSP applications tripled maize yields compared to the control, senna + TSP and tithonia sole application doubled yields, while senna sole applications did not increase yields substantially. A large residual yield was produced in the tithonia treatments in a subsequent crop. These yield results were consistent with the higher quality and faster release of N and P from the tithonia leaves compared to senna. The tithonia biomass transfer system can improve yields in the short term but has limitations because of the large amount of biomass and the associated labor requirements. This revised version was published online in June 2006 with corrections to the Cover Date.     

Phosphorus utilization in juvenile Clarias gariepinus fed phytase-supplemented diets based on soya bean (oil-extracted) and full-fat (roasted): A comparison

The effect of microbial phytase on phosphorus utilization in juvenile Clarias gariepinus (initial fish body weight 11.55 ± 0.2 g) was tested on two different diets based on oil-extracted soya bean (Experiment 1) and roasted soya bean meal (Experiment 2) using a 5 × 5 experimental design for 84 days. The basal isonitrogenous and isocaloric diets for oil-extracted and roasted soya bean were formulated to replace fish meal at 25% (S1E), 50% (S2E), 75% (S3E), 100% (S4E); and 25% (S1), 50% (S2), 75% (S3), 100% (S4), respectively. Each treatment was replicated four times. Microbial phytase was supplemented in each replicate at 250 FTU/g (P1), 500 FTU/g (P2), 750 FTU/g (P3), and 1,000 FTU/g (P4). Basal controls, which included a fish meal-based diet (S0), were not supplemented with phytase (P0). The result in Experiment 1 showed that there was a significant increase in whole-body protein and reduction in fat with phytase compared to a diet without phytase (P < 0.05). Serum total protein declined significantly with phytase supplementation (P < 0.05). Serum phosphorus and glucose were higher with phytase supplementation compared to control (P < 0.05). Bone minerals declined significantly with increasing level of soya bean compared to fish meal diet (P < 0.05). In Experiment 2, serum phosphorus was improved with phytase compared to control with no phytase (P > 0.05). A significant reduction in whole-body protein and increase in fat was observed for fish fed phytase diets compared to diets with no phytase, regardless of soya bean level (P < 0.05); however, ash content was improved with phytase (250 FTU/g) compared to control (P < 0.05). Phytase supplementation improved bone phosphorus (250 FTU/g), calcium (250 FTU/g), magnesium (250–500 FTU/g), and zinc (250–1,000 FTU/g) compared to control (P < 0.05). In conclusion, the research has demonstrated that improved bone phosphorus (P) and growth could be achieved with the supplementation of dietary phytase.     

Shedding light on the migratory patterns of the Amazonian goliath catfish,Brachyplatystoma platynemum,using otolith 87Sr/86Sr analyses

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Effects of an Enterococcus faecium‐based probiotic on growth performance and health of Pirarucu,Arapaima gigas

Intensive fish farming has resulted in an increased concern for disease outbreaks. Probiotic use is one of the strategies being developed to improve fish health and productivity. Measures of probiotic colonization, growth performance, haematological characteristics and parasite load were used to evaluate the effect of diets supplemented with Enterococcus faecium on growth and health of Arapaima gigas juveniles. A completely randomized design with four treatments (diet with E. faecium at 1 × 10⁶ CFU/g and 1 × 10⁸ CFU/g, control diet and diet with the culture medium MRS) and three replicates was used. Ninety‐six Arapaima juveniles were distributed in 12 cages fed with the specified diet for 68 days. Colonization of the intestinal tract by lactic acid bacteria reduced the total number of heterotrophic bacteria in fish fed with probiotics compared to controls. Fish fed a supplemented diet containing 1 × 10⁸ CFU/g presented higher values of weight gain, survival and fish growth uniformity, and lower values of feed conversion ratio. The prevalence of Trichodina sp. could have affected the survival of fish in the control group. Reduction in parasite load and an increase in haematocrit, the number of erythrocytes, thrombocytes, neutrophils and monocytes were also observed in fish fed the diet containing 1 × 10⁸ CFU/g. Enterococcus faecium presented a probiotic effect in A. gigas juveniles and can be recommended for use at a concentration of 1 × 10⁸ CFU/g to modify the gut microbiota, improve growth performance and haematology and reduce parasitic load.