Comparative Genomics for Gene Isolation in Legumes

The similarity in gene order between closely related taxa suggests that genomic information from model systems should facilitate gene isolation and characterization in target crops. If this is the case, a great deal of effort and investment can be saved by focusing attention on a few model systems that have appropriate applicability. Pea （Pisura sativum） provides a good test case： its genome is large and the insertion sites for repetitive elements, which comprise the bulk of its genome, are highly polymorphic （Jing et al., 2005; Vershinin et al., 2003）, so we expect a great deal of structural polymorphism between the genomes of Pisum lines. Yet the genetic map of Pisum is essentially coUinear with Medicago （Choi et al., 2004; Kalo et al., 2004）.     

Evaluation of formalin-fixed paraffin-embedded tissues from vaccine site-associated sarcomas of cats for polyomavirus DNA and antigen

OBJECTIVE: To determine whether vaccine site-associated sarcomas (VSS) from cats contain polyomavirus antigen or DNA. SAMPLE POPULATION: 50 formalin-fixed paraffin-embedded tissue blocks of VSS from cats. PROCEDURE: Sections from each tissue block were evaluated for polyomavirus antigen by use of an avidin-biotin-complex immunohistochemical staining method, using rabbit anti-murine polyomavirus polyclonal antiserum as the primary antibody. The DNA was extracted from sections of each tissue block, and a polymerase chain reaction assay was performed, using primers designed to amplify regions of the bovine polyomavirus genome and consensus polyomavirus primers designed to detect unknown polyomaviruses. RESULTS: Polyomavirus antigen and DNA were not detected in any of the VSS. CONCLUSIONS AND CLINICAL RELEVANCE: Results suggest that polyomaviruses likely do not have any direct involvement in the pathogenesis of VSS in cats.     

Immunohistochemical detection of tumor suppressor gene p53 protein in feline injection site-associated sarcomas

Sarcomas associated with injection sites are a rare but important problem in cats. Immunohistochemical detection of p53 protein may correlate to mutation of the p53 tumor suppressor gene, a gene known to be important in oncogenesis. The expression of nuclear p53 protein in 40 feline injection site-assocated sarcomas was examined by immunohistochemical staining. In 42.5% (17/40), tumor cell nuclei were stained darkly; in 20% (8/40), tumor cell nuclei were stained palely; and in 37.5% (15/40), tumor cell nuclei were unstained. Immunohistochemical detection of p53 protein in a proportion of injection site-associated sarcomas suggests that mutation of the p53 gene may play a role in the pathogenesis of these tumors.     

Sequential sampling for incidence of phomopsis leaf blight of strawberry

ABSTRACT Sequential sampling models for estimation and classification were developed for the incidence of strawberry leaflets infected by Phomopsis obscurans. Sampling protocols were based on a binary power law analysis of the spatial heterogeneity of Phomopsis leaf blight in commercial fields in Ohio. For sequential estimation, samples were collected until mean disease incidence could be estimated with a preselected coefficient of variation of the mean (C). For sequential classification, samples were collected until there was sufficient evidence to classify mean incidence as being below or above a threshold (p(t)) based on the sequential probability ratio test. Monte-Carlo simulations were used to determine the theoretical average sample number (ASN) and probability of classifying mean incidence as less than p(t) (operating characteristic) for any true value of incidence. Estimation and classification sampling models were both tested with bootstrap simulations of randomly selected data sets and validated by data sets from another year that were not utilized in developing the models. In general, achieved (or calculated) C after sequentially sampling for estimation was close to the preselected C of 0.2, and mean incidence was estimated with little bias. Achieving a C of 0.1 with less than 75 sampling units (the nominal value for many original data sets) was more problematical, especially with true incidence less than 0.2. ASN for classification was only 9 to 18 at disease incidence values near p(t), and approximately five or less at incidence values far from p(t). Correct classification decisions were made in over 88% of the validation data sets. Results indicated that it is possible to estimate Phomopsis leaf blight with high precision and with high correct classification probabilities.     

Lactation persistency: insights from mammary cell proliferation studies

A persistent lactation is dependent on maintaining the number and activity of milk secreting cells with advancing lactation. When dairy cows are milked twice daily, the increase in milk yield from parturition to peak lactation is due to increased secretory activity per cell rather than to accretion of additional epithelial cells. After peak lactation, declining milk yield is due to loss of mammary epithelial cells by apoptosis. During lactation, only 0.3% of mammary cells proliferate in a 24-h period. Yet this proliferative rate is sufficient to replace most mammary epithelial cells by the end of lactation. Management practices can influence lactation persistency. Administration of bovine somatotropin may enhance persistency by increasing cell proliferation and turnover, or by reducing the rate of apoptosis. Increased photoperiod may also increase persistency of lactation by mechanisms that are as yet undefined. Increased milking frequency during the first weeks of lactation increases milk yield, even after return to less frequent milking, with increases of approximately 8% over the entire lactation. A mammary cell proliferation response to frequent milking during early lactation appears to be involved. Conversely, advanced pregnancy, infrequent milking, and mastitis increase death of epithelial cells by apoptosis. Regulation of mammary cell renewal provides a key to increasing persistency. Investigations to characterize epithelial cells that serve as the proliferative population in the bovine mammary gland have been initiated. Epithelial cells that stain lightly in histological sections are evident through all phases of mammary development and secretion and account for nearly all proliferation in the prepubertal gland. Characterization of these cells may provide a means to regulate mammary cell proliferation and thus to enhance persistency, reduce the effects of mastitis, and decrease the necessity for a dry period.     

Effect of restricted postweaning growth resulting from reduced floor and feeder-trough space on pig growth performance to slaughter weight in a wean-to-finish production system

The effect of reduced pig growth rate postweaning as a result of restricted floor space and feeder trough space on subsequent growth to slaughter was investigated in a wean-to-finish system. Crossbred pigs (n = 1,728) were used in a randomized block design with a 2 x 2 x 2 factorial arrangement of treatments: 1) floor space (high [0.630 m2/pig] vs. low floor space [0.315 m2/pig]), 2) feeder trough space (unrestricted [4 cm/pig] vs. restricted feeder trough space [2 cm/pig]), and 3) period of imposing floor- and feeder-trough-space treatments (12 vs. 14 wk postweaning). Growth performance was measured from weaning (5.5 +/- 0.01 kg of BW; 17 d of age) to slaughter (the end of wk 25 postweaning). From the end of the treatment period to the end of wk 25, pigs on all treatments had the same floor and feeder trough space. Pigs with low floor space had lower (P < 0.01) ADG, ADFI, and gain:feed ratio than those with high floor space, and were therefore lighter (P < 0.05) at the end of the postweaning treatment period. Pigs given the restricted feeder trough space had lower (P < 0.05) ADFI, similar (P > 0.05) ADG, and higher (P < 0.01) gain:feed ratio than those with unrestricted feeder trough space during the treatment period. Pigs in the 14-wk treatment period had higher (P < 0.01) ADG and ADFI, but lower gain:feed than those in the 12-wk treatment during that period. In the subsequent period, from the end of treatment to wk 25, there was an interaction (P < 0.05) between floor space and treatment period; the difference in ADG and gain:feed for pigs on low vs. high floor space was greater for the 14-wk than the 12-wk treatment period. However, low-floor-space pigs tended (P = 0.06) to be lighter than high-floor-space pigs at the end of wk 25 postweaning. Neither feeder trough space nor treatment period affected pig growth performance during the period from the end of treatment to wk 25. Carcass backfat and longissimus depths at the end of wk 25 were not influenced (P > 0.05) by treatment. In summary, pigs with restricted growth due to low floor space until either 12 or 14 wk postweaning had increased growth and feed efficiency in the subsequent period to wk 25 postweaning, with only a slight effect on BW and no effect on carcass measures.